Pre_GI: OUP Neighbours

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Query: NC_008228:776000 Pseudoalteromonas atlantica T6c, complete genome

D: 29.4808

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.

Number of Neighbours: 186

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_011025:134292*Mycoplasma arthritidis 158L3-1, complete genome75.4626 %Subject Query14.9711
NC_007482:607365Pseudoalteromonas haloplanktis TAC125 chromosome II, complete76.2163 %Subject Query17.0051
NC_015420:35384Lactobacillus buchneri NRRL B-30929 plasmid pLBUC01, complete75.0337 %Subject Query17.7985
NC_014800:329861Pseudoalteromonas sp. SM9913 chromosome chromosome II, complete78.0699 %Subject ←→ Query20.5794
NC_011186:819828Vibrio fischeri MJ11 chromosome II, complete sequence76.7433 %Subject ←→ Query20.6651
NC_006841:750000Vibrio fischeri ES114 chromosome II, complete sequence76.7096 %Subject ←→ Query20.9889
NC_011527:953442*Coxiella burnetii CbuG_Q212, complete genome75.2635 %Subject ←→ Query21.4555
NC_008783:29972*Bartonella bacilliformis KC583, complete genome75.1777 %Subject ←→ Query21.9601
NC_008610:1068429*Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica),75.0766 %Subject ←→ Query23.0632
NC_010611:797351Acinetobacter baumannii ACICU, complete genome75.7108 %Subject ←→ Query23.2125
NC_009727:670616Coxiella burnetii Dugway 7E9-12, complete genome75.5453 %Subject ←→ Query23.2673
NC_002971:619355Coxiella burnetii RSA 493, complete genome76.6146 %Subject ←→ Query23.2807
NC_003910:3448983Colwellia psychrerythraea 34H, complete genome75.1838 %Subject ←→ Query23.4025
NC_014259:3369000Acinetobacter sp. DR1 chromosome, complete genome75.0766 %Subject ←→ Query23.5753
NC_010117:700112Coxiella burnetii RSA 331, complete genome76.4675 %Subject ←→ Query23.7977
NC_011527:1255998Coxiella burnetii CbuG_Q212, complete genome76.0784 %Subject ←→ Query23.804
NC_007954:2440000*Shewanella denitrificans OS217, complete genome76.0876 %Subject ←→ Query24.4194
NC_015637:819233*Vibrio anguillarum 775 chromosome chromosome II, complete sequence75.7108 %Subject ←→ Query24.545
NC_014207:1366766*Methylotenera sp. 301 chromosome, complete genome75.3922 %Subject ←→ Query24.6747
NC_003910:187630Colwellia psychrerythraea 34H, complete genome75.7322 %Subject ←→ Query24.7994
NC_008345:3756977Shewanella frigidimarina NCIMB 400, complete genome77.4939 %Subject ←→ Query24.845
NC_016041:2420098Glaciecola nitratireducens FR1064 chromosome, complete genome79.6232 %Subject ←→ Query24.8954
NC_002940:1065246*Haemophilus ducreyi 35000HP, complete genome77.5123 %Subject ←→ Query24.9088
NC_009085:893601Acinetobacter baumannii ATCC 17978, complete genome75.818 %Subject ←→ Query24.927
NC_015497:2997275*Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome78.4559 %Subject ←→ Query25.0122
NC_008345:3199965Shewanella frigidimarina NCIMB 400, complete genome79.5711 %Subject ←→ Query25.0699
NC_007520:2305610Thiomicrospira crunogena XCL-2, complete genome76.3388 %Subject ←→ Query25.1763
NC_015554:1653614Alteromonas sp. SN2 chromosome, complete genome77.5398 %Subject ←→ Query25.4955
NC_012913:167034Aggregatibacter aphrophilus NJ8700, complete genome76.3542 %Subject ←→ Query25.524
NC_015497:3497680Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome79.0349 %Subject ←→ Query25.5502
NC_015637:669593Vibrio anguillarum 775 chromosome chromosome II, complete sequence75.8058 %Subject ←→ Query25.6019
NC_015554:2505437*Alteromonas sp. SN2 chromosome, complete genome75.5882 %Subject ←→ Query25.8086
NC_008228:4696338Pseudoalteromonas atlantica T6c, complete genome78.4681 %Subject ←→ Query25.8268
NC_015637:325561Vibrio anguillarum 775 chromosome chromosome II, complete sequence75.5913 %Subject ←→ Query25.9135
NC_015497:2859724Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome75.6985 %Subject ←→ Query26.1217
NC_008228:2450700Pseudoalteromonas atlantica T6c, complete genome77.7543 %Subject ←→ Query26.2261
NC_011566:3994239*Shewanella piezotolerans WP3, complete genome76.8995 %Subject ←→ Query26.295
NC_008228:2295841*Pseudoalteromonas atlantica T6c, complete genome78.462 %Subject ←→ Query26.5139
NC_015637:891842Vibrio anguillarum 775 chromosome chromosome II, complete sequence78.0453 %Subject ←→ Query26.5351
NC_015633:413587Vibrio anguillarum 775 chromosome chromosome I, complete sequence75.7751 %Subject ←→ Query26.7419
NC_008228:2068641Pseudoalteromonas atlantica T6c, complete genome76.394 %Subject ←→ Query26.7571
NC_013166:784339Kangiella koreensis DSM 16069, complete genome75.7077 %Subject ←→ Query26.7966
NC_008526:2373190Lactobacillus casei ATCC 334, complete genome75.1256 %Subject ←→ Query26.8543
NC_015497:2831148Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome81.2898 %Subject ←→ Query26.9942
NC_009052:4437649*Shewanella baltica OS155, complete genome77.9596 %Subject ←→ Query27.2282
NC_008345:3394154*Shewanella frigidimarina NCIMB 400, complete genome75.6832 %Subject ←→ Query27.2838
NC_012913:2189862*Aggregatibacter aphrophilus NJ8700, complete genome77.3284 %Subject ←→ Query27.2935
NC_011753:1680738Vibrio splendidus LGP32 chromosome 1, complete genome75.4228 %Subject ←→ Query27.3346
NC_008228:372520*Pseudoalteromonas atlantica T6c, complete genome79.1881 %Subject ←→ Query27.3377
NC_009997:3661083Shewanella baltica OS195, complete genome77.7543 %Subject ←→ Query27.3924
NC_012913:626449Aggregatibacter aphrophilus NJ8700, complete genome75.0551 %Subject ←→ Query27.3926
NC_009901:4899535Shewanella pealeana ATCC 700345, complete genome77.6379 %Subject ←→ Query27.4349
NC_006371:1848487Photobacterium profundum SS9 chromosome 2, complete sequence75.0919 %Subject ←→ Query27.4745
NC_008228:3679949Pseudoalteromonas atlantica T6c, complete genome76.3542 %Subject ←→ Query27.5234
NC_015554:3696970*Alteromonas sp. SN2 chromosome, complete genome75.5882 %Subject ←→ Query27.5353
NC_015554:4824000Alteromonas sp. SN2 chromosome, complete genome75.6097 %Subject ←→ Query27.5657
NC_015497:1287877Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome79.9847 %Subject ←→ Query27.577
NC_015224:2618192*Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.5699 %Subject ←→ Query27.59
NC_015222:94847Nitrosomonas sp. AL212 chromosome, complete genome75.0337 %Subject ←→ Query27.6612
NC_009053:553298*Actinobacillus pleuropneumoniae L20, complete genome75.8425 %Subject ←→ Query27.7268
NC_010334:3224009Shewanella halifaxensis HAW-EB4, complete genome75.9743 %Subject ←→ Query27.7481
NC_007514:1840971*Chlorobium chlorochromatii CaD3, complete genome77.6348 %Subject ←→ Query27.9244
NC_015554:4648919*Alteromonas sp. SN2 chromosome, complete genome77.4479 %Subject ←→ Query28.052
NC_008228:1307943Pseudoalteromonas atlantica T6c, complete genome79.1544 %Subject ←→ Query28.1676
NC_012968:1191037Methylotenera mobilis JLW8, complete genome77.5153 %Subject ←→ Query28.1939
NC_008228:1404126Pseudoalteromonas atlantica T6c, complete genome76.5074 %Subject ←→ Query28.2625
NC_009052:4335754Shewanella baltica OS155, complete genome78.4528 %Subject ←→ Query28.274
NC_015497:1058980Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome81.1183 %Subject ←→ Query28.3135
NC_004347:4441110Shewanella oneidensis MR-1, complete genome78.0545 %Subject ←→ Query28.4344
NC_012913:1832500*Aggregatibacter aphrophilus NJ8700, complete genome78.5999 %Subject ←→ Query28.5015
NC_012968:2228943*Methylotenera mobilis JLW8, complete genome77.1722 %Subject ←→ Query28.5567
NC_015224:1641819*Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,76.0263 %Subject ←→ Query28.5984
NC_012968:2000218*Methylotenera mobilis JLW8, complete genome75.1256 %Subject ←→ Query28.7315
NC_007954:3887488Shewanella denitrificans OS217, complete genome81.4951 %Subject ←→ Query28.7444
NC_007954:1494291Shewanella denitrificans OS217, complete genome76.3542 %Subject ←→ Query28.7564
NC_015497:3739556Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome75.9099 %Subject ←→ Query28.7824
NC_009999:38832Shewanella baltica OS195 plasmid pS19502, complete sequence79.9449 %Subject ←→ Query28.8515
NC_009052:2683447*Shewanella baltica OS155, complete genome76.7249 %Subject ←→ Query28.9093
NC_011138:1374520Alteromonas macleodii 'Deep ecotype', complete genome75.8793 %Subject ←→ Query29.039
NC_009997:2585588Shewanella baltica OS195, complete genome80.3248 %Subject ←→ Query29.1282
NC_010554:1871000Proteus mirabilis HI4320, complete genome77.0956 %Subject ←→ Query29.2221
NC_009997:415808Shewanella baltica OS195, complete genome78.5784 %Subject ←→ Query29.2589
NC_003143:483395*Yersinia pestis CO92, complete genome75.0214 %Subject ←→ Query29.2984
NC_007514:1936812*Chlorobium chlorochromatii CaD3, complete genome75.3799 %Subject ←→ Query29.3792
NC_007514:904565Chlorobium chlorochromatii CaD3, complete genome75.5821 %Subject ←→ Query29.4258
NC_009997:3583166Shewanella baltica OS195, complete genome78.7316 %Subject ←→ Query29.4446
NC_009997:3483157*Shewanella baltica OS195, complete genome75.7384 %Subject ←→ Query29.4747
NC_015497:4683741*Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome76.0938 %Subject ←→ Query29.5224
NC_004347:3303957Shewanella oneidensis MR-1, complete genome76.2377 %Subject ←→ Query29.572
NC_013456:1819421*Vibrio sp. Ex25 chromosome 1, complete genome77.0129 %Subject ←→ Query29.5743
NC_009997:2967521*Shewanella baltica OS195, complete genome75.2145 %Subject ←→ Query29.575
NC_009997:5188221Shewanella baltica OS195, complete genome78.3364 %Subject ←→ Query29.6455
NC_009901:3317068Shewanella pealeana ATCC 700345, complete genome76.6176 %Subject ←→ Query29.6662
NC_015633:2565753*Vibrio anguillarum 775 chromosome chromosome I, complete sequence76.2408 %Subject ←→ Query29.7101
NC_009997:2699644Shewanella baltica OS195, complete genome75.2819 %Subject ←→ Query29.7301
NC_008750:807446Shewanella sp. W3-18-1, complete genome79.8805 %Subject ←→ Query29.7696
NC_012968:865465Methylotenera mobilis JLW8, complete genome75.9436 %Subject ←→ Query29.805
NC_005139:518760Vibrio vulnificus YJ016 chromosome I, complete sequence76.9485 %Subject ←→ Query29.8091
NC_010465:2282874Yersinia pseudotuberculosis YPIII, complete genome75.3554 %Subject ←→ Query29.8112
NC_009052:4168776*Shewanella baltica OS155, complete genome76.4798 %Subject ←→ Query29.8197
NC_005810:4224500Yersinia pestis biovar Microtus str. 91001, complete genome75.0827 %Subject ←→ Query29.8821
NC_008750:3435495*Shewanella sp. W3-18-1, complete genome77.8431 %Subject ←→ Query29.9064
NC_009654:4253431*Marinomonas sp. MWYL1, complete genome76.7953 %Subject ←→ Query29.9246
NC_004347:3670145*Shewanella oneidensis MR-1, complete genome77.7083 %Subject ←→ Query29.9322
NC_009901:2787978Shewanella pealeana ATCC 700345, complete genome78.2169 %Subject ←→ Query29.9683
NC_004347:718091Shewanella oneidensis MR-1, complete genome79.8713 %Subject ←→ Query30.0041
NC_009052:2512373Shewanella baltica OS155, complete genome78.8419 %Subject ←→ Query30.0584
NC_008321:3512471Shewanella sp. MR-4, complete genome75.9589 %Subject ←→ Query30.0796
NC_006155:713174*Yersinia pseudotuberculosis IP 32953, complete genome76.0999 %Subject ←→ Query30.0948
NC_009654:91096*Marinomonas sp. MWYL1, complete genome78.9032 %Subject ←→ Query30.2225
NC_012968:239476*Methylotenera mobilis JLW8, complete genome76.9822 %Subject ←→ Query30.2298
NC_004347:791897Shewanella oneidensis MR-1, complete genome77.6317 %Subject ←→ Query30.2408
NC_009654:2309365*Marinomonas sp. MWYL1, complete genome75.049 %Subject ←→ Query30.338
NC_009654:1729159*Marinomonas sp. MWYL1, complete genome78.3977 %Subject ←→ Query30.3593
NC_012982:1899973Hirschia baltica ATCC 49814, complete genome75.5362 %Subject ←→ Query30.3976
NC_007954:334795Shewanella denitrificans OS217, complete genome78.1924 %Subject ←→ Query30.4254
NC_003910:4234000Colwellia psychrerythraea 34H, complete genome75.9252 %Subject ←→ Query30.5236
NC_008345:2717945Shewanella frigidimarina NCIMB 400, complete genome77.5551 %Subject ←→ Query30.5387
NC_009052:1211989*Shewanella baltica OS155, complete genome76.731 %Subject ←→ Query30.5674
NC_008526:565902Lactobacillus casei ATCC 334, complete genome75.9038 %Subject ←→ Query30.5707
NC_009997:2635025Shewanella baltica OS195, complete genome75.9007 %Subject ←→ Query30.6571
NC_004347:3197219Shewanella oneidensis MR-1, complete genome76.6667 %Subject ←→ Query30.7018
NC_012968:507988*Methylotenera mobilis JLW8, complete genome78.2261 %Subject ←→ Query30.7369
NC_004347:2668000*Shewanella oneidensis MR-1, complete genome77.6869 %Subject ←→ Query30.8998
NC_009997:2069894Shewanella baltica OS195, complete genome77.1324 %Subject ←→ Query30.9447
NC_007912:3828980Saccharophagus degradans 2-40, complete genome75.2083 %Subject ←→ Query30.9855
NC_013198:394000*Lactobacillus rhamnosus GG, complete genome76.2898 %Subject ←→ Query31.056
NC_004347:4541742Shewanella oneidensis MR-1, complete genome76.5686 %Subject ←→ Query31.2642
NC_013416:1621469Aggregatibacter actinomycetemcomitans D11S-1, complete genome77.5092 %Subject ←→ Query31.4418
NC_009052:1899954Shewanella baltica OS155, complete genome77.4142 %Subject ←→ Query31.5886
NC_008577:1015419Shewanella sp. ANA-3 chromosome 1, complete sequence76.7616 %Subject ←→ Query31.5905
NC_004459:2443000*Vibrio vulnificus CMCP6 chromosome I, complete sequence75.9314 %Subject ←→ Query31.6
NC_015581:1891409*Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome78.2169 %Subject ←→ Query31.6938
NC_010334:1701957Shewanella halifaxensis HAW-EB4, complete genome75.2451 %Subject ←→ Query31.739
NC_009052:2107692Shewanella baltica OS155, complete genome77.6256 %Subject ←→ Query31.778
NC_005139:1784000Vibrio vulnificus YJ016 chromosome I, complete sequence76.0386 %Subject ←→ Query31.7867
NC_015581:771482*Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome77.1507 %Subject ←→ Query31.8014
NC_011026:3009500*Chloroherpeton thalassium ATCC 35110, complete genome75.2053 %Subject ←→ Query31.8736
NC_010634:2124185*Yersinia pseudotuberculosis PB1/+, complete genome75.0429 %Subject ←→ Query31.8992
NC_008322:3585601*Shewanella sp. MR-7, complete genome76.8719 %Subject ←→ Query32.0176
NC_009654:3316458*Marinomonas sp. MWYL1, complete genome78.7316 %Subject ←→ Query32.1528
NC_008577:1579950Shewanella sp. ANA-3 chromosome 1, complete sequence77.5337 %Subject ←→ Query32.2252
NC_004347:4007847Shewanella oneidensis MR-1, complete genome76.7892 %Subject ←→ Query32.3067
NC_003143:2433190*Yersinia pestis CO92, complete genome75.0092 %Subject ←→ Query32.42
NC_011026:2450325Chloroherpeton thalassium ATCC 35110, complete genome75.1379 %Subject ←→ Query32.4678
NC_008577:1885809*Shewanella sp. ANA-3 chromosome 1, complete sequence76.9485 %Subject ←→ Query32.5693
NC_006155:2208686*Yersinia pseudotuberculosis IP 32953, complete genome75.2543 %Subject ←→ Query32.6281
NC_005810:1520000Yersinia pestis biovar Microtus str. 91001, complete genome75.2298 %Subject ←→ Query32.6435
NC_015633:461143Vibrio anguillarum 775 chromosome chromosome I, complete sequence79.6998 %Subject ←→ Query32.6547
NC_008150:1705152*Yersinia pestis Antiqua, complete genome75.5515 %Subject ←→ Query32.6597
NC_008322:2716676Shewanella sp. MR-7, complete genome76.1428 %Subject ←→ Query32.7019
NC_007954:3171081*Shewanella denitrificans OS217, complete genome75.6311 %Subject ←→ Query32.7279
NC_015581:1791658*Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome77.6593 %Subject ←→ Query32.7922
NC_008321:2649781Shewanella sp. MR-4, complete genome76.4277 %Subject ←→ Query32.9025
NC_009997:726840Shewanella baltica OS195, complete genome75.2849 %Subject ←→ Query33.1467
NC_012968:1594954Methylotenera mobilis JLW8, complete genome75.1287 %Subject ←→ Query33.3018
NC_008150:905000Yersinia pestis Antiqua, complete genome75.3339 %Subject ←→ Query33.3319
NC_012968:1108687*Methylotenera mobilis JLW8, complete genome75.0735 %Subject ←→ Query33.5112
NC_005810:2180303*Yersinia pestis biovar Microtus str. 91001, complete genome77.114 %Subject ←→ Query33.5745
NC_007912:174733Saccharophagus degradans 2-40, complete genome75.6924 %Subject ←→ Query33.6207
NC_008322:1898000*Shewanella sp. MR-7, complete genome76.3235 %Subject ←→ Query33.767
NC_010334:1783500*Shewanella halifaxensis HAW-EB4, complete genome75.2757 %Subject ←→ Query33.9047
NC_008345:3287000Shewanella frigidimarina NCIMB 400, complete genome76.4798 %Subject ←→ Query33.914
NC_006155:2461262*Yersinia pseudotuberculosis IP 32953, complete genome75.6311 %Subject ←→ Query34.0957
NC_009831:1539159*Shewanella sediminis HAW-EB3, complete genome76.8107 %Subject ←→ Query34.3628
NC_010634:2376245*Yersinia pseudotuberculosis PB1/+, complete genome76.5993 %Subject ←→ Query34.4786
NC_009052:3381943Shewanella baltica OS155, complete genome76.6759 %Subject ←→ Query34.4844
NC_003910:2588000Colwellia psychrerythraea 34H, complete genome76.5227 %Subject ←→ Query34.4966
NC_008321:1523323*Shewanella sp. MR-4, complete genome79.9908 %Subject ←→ Query34.601
NC_008321:3815940*Shewanella sp. MR-4, complete genome76.5931 %Subject ←→ Query34.6739
NC_005139:343500Vibrio vulnificus YJ016 chromosome I, complete sequence75.9252 %Subject ←→ Query34.9328
NC_002506:822401Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete77.2488 %Subject ←→ Query34.9693
NC_008321:1993541*Shewanella sp. MR-4, complete genome75.2757 %Subject ←→ Query34.9743
NC_010410:3166279*Acinetobacter baumannii AYE, complete genome75.288 %Subject ←→ Query34.9749
NC_015224:1703130Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.9038 %Subject ←→ Query34.9769
NC_015224:3225000*Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.3462 %Subject ←→ Query35.2572
NC_006371:1997954*Photobacterium profundum SS9 chromosome 2, complete sequence76.9822 %Subject ←→ Query35.2715
NC_004459:2025436Vibrio vulnificus CMCP6 chromosome I, complete sequence76.3143 %Subject ←→ Query35.3621
NC_015224:1391088Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,76.345 %Subject ←→ Query36.0736
NC_004547:3207776*Erwinia carotovora subsp. atroseptica SCRI1043, complete genome75.0705 %Subject ←→ Query36.2193
NC_015224:3587500Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.8272 %Subject ←→ Query36.7592
NC_008322:1595500*Shewanella sp. MR-7, complete genome77.6746 %Subject ←→ Query37.3246
NC_015224:1067390Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.098 %Subject ←→ Query38.2547
NC_015572:1252000Methylomonas methanica MC09 chromosome, complete genome75.2788 %Subject ←→ Query38.7541
NC_002505:238569Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete76.5564 %Subject ←→ Query39.3701
NC_009832:1719149Serratia proteamaculans 568, complete genome75.0551 %Subject Query48.0067