Pre_GI: OUP Neighbours

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Query: NC_008228:2295841 Pseudoalteromonas atlantica T6c, complete genome

D: 26.5139

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.

Number of Neighbours: 121




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_007482:607365Pseudoalteromonas haloplanktis TAC125 chromosome II, complete75.9957 %Subject ←→ Query17.0051
NC_014800:329861Pseudoalteromonas sp. SM9913 chromosome chromosome II, complete77.8615 %Subject ←→ Query20.5794
NC_005966:159232*Acinetobacter sp. ADP1, complete genome76.4767 %Subject ←→ Query21.8081
NC_014147:1200984Moraxella catarrhalis RH4 chromosome, complete genome77.5521 %Subject ←→ Query23.1196
NC_007954:2440000*Shewanella denitrificans OS217, complete genome76.5472 %Subject ←→ Query24.4194
NC_015637:819233*Vibrio anguillarum 775 chromosome chromosome II, complete sequence77.7267 %Subject ←→ Query24.545
NC_008345:3756977Shewanella frigidimarina NCIMB 400, complete genome80.674 %Subject ←→ Query24.845
NC_016041:2420098Glaciecola nitratireducens FR1064 chromosome, complete genome76.5901 %Subject ←→ Query24.8954
NC_015497:2997275*Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome77.6409 %Subject ←→ Query25.0122
NC_008345:3199965Shewanella frigidimarina NCIMB 400, complete genome75.8824 %Subject ←→ Query25.0699
NC_007520:2305610Thiomicrospira crunogena XCL-2, complete genome75.1808 %Subject ←→ Query25.1763
NC_014334:2696000Lactobacillus casei str. Zhang chromosome, complete genome75.046 %Subject ←→ Query25.2128
NC_015554:1653614Alteromonas sp. SN2 chromosome, complete genome77.3009 %Subject ←→ Query25.4955
NC_015497:3497680Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome78.8143 %Subject ←→ Query25.5502
NC_015637:669593Vibrio anguillarum 775 chromosome chromosome II, complete sequence77.8033 %Subject ←→ Query25.6019
NC_008228:4696338Pseudoalteromonas atlantica T6c, complete genome79.2279 %Subject ←→ Query25.8268
NC_015637:325561Vibrio anguillarum 775 chromosome chromosome II, complete sequence78.0607 %Subject ←→ Query25.9135
NC_015497:2859724Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome76.9914 %Subject ←→ Query26.1217
NC_011566:3994239*Shewanella piezotolerans WP3, complete genome75.9191 %Subject ←→ Query26.295
NC_015637:891842Vibrio anguillarum 775 chromosome chromosome II, complete sequence75.9681 %Subject ←→ Query26.5351
NC_008228:2068641Pseudoalteromonas atlantica T6c, complete genome79.8499 %Subject ←→ Query26.7571
NC_008526:2373190Lactobacillus casei ATCC 334, complete genome76.1428 %Subject ←→ Query26.8543
NC_015497:2831148Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome81.7004 %Subject ←→ Query26.9942
NC_010999:2516000Lactobacillus casei, complete genome76.1121 %Subject ←→ Query27.1158
NC_009052:4437649*Shewanella baltica OS155, complete genome75.4657 %Subject ←→ Query27.2282
NC_008228:372520*Pseudoalteromonas atlantica T6c, complete genome80.3094 %Subject ←→ Query27.3377
NC_009997:3661083Shewanella baltica OS195, complete genome77.1783 %Subject ←→ Query27.3924
NC_008228:3679949Pseudoalteromonas atlantica T6c, complete genome77.163 %Subject ←→ Query27.5234
NC_015554:3696970*Alteromonas sp. SN2 chromosome, complete genome76.6667 %Subject ←→ Query27.5353
NC_015497:1287877Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome77.5888 %Subject ←→ Query27.577
NC_015224:2618192*Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.8395 %Subject ←→ Query27.59
NC_007954:1823085*Shewanella denitrificans OS217, complete genome75.579 %Subject ←→ Query27.7501
NC_007514:1840971*Chlorobium chlorochromatii CaD3, complete genome75.0429 %Subject ←→ Query27.9244
NC_015554:4648919*Alteromonas sp. SN2 chromosome, complete genome76.8229 %Subject ←→ Query28.052
NC_008228:1307943Pseudoalteromonas atlantica T6c, complete genome79.1544 %Subject ←→ Query28.1676
NC_012968:1191037Methylotenera mobilis JLW8, complete genome76.0263 %Subject ←→ Query28.1939
NC_009052:4335754Shewanella baltica OS155, complete genome79.6599 %Subject ←→ Query28.274
NC_015497:1058980Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome78.9982 %Subject ←→ Query28.3135
NC_004347:4441110Shewanella oneidensis MR-1, complete genome81.1121 %Subject ←→ Query28.4344
NC_015224:1440283Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.8058 %Subject ←→ Query28.5415
NC_012968:2228943*Methylotenera mobilis JLW8, complete genome75.9896 %Subject ←→ Query28.5567
NC_015224:1641819*Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.095 %Subject ←→ Query28.5984
NC_007954:3887488Shewanella denitrificans OS217, complete genome77.0588 %Subject ←→ Query28.7444
NC_007954:1494291Shewanella denitrificans OS217, complete genome75.2696 %Subject ←→ Query28.7564
NC_009999:38832Shewanella baltica OS195 plasmid pS19502, complete sequence80.5086 %Subject ←→ Query28.8515
NC_009052:2683447*Shewanella baltica OS155, complete genome76.9516 %Subject ←→ Query28.9093
NC_010159:3169266Yersinia pestis Angola, complete genome75.3554 %Subject ←→ Query29.1008
NC_009997:2585588Shewanella baltica OS195, complete genome75.8578 %Subject ←→ Query29.1282
NC_010159:2440947Yersinia pestis Angola, complete genome75.4105 %Subject ←→ Query29.2315
NC_009997:415808Shewanella baltica OS195, complete genome76.7586 %Subject ←→ Query29.2589
NC_009997:3583166Shewanella baltica OS195, complete genome76.3909 %Subject ←→ Query29.4446
NC_009997:3483157*Shewanella baltica OS195, complete genome75.9896 %Subject ←→ Query29.4747
NC_008228:776000Pseudoalteromonas atlantica T6c, complete genome78.462 %Subject ←→ Query29.4808
NC_015497:4683741*Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome77.1967 %Subject ←→ Query29.5224
NC_009901:4028175Shewanella pealeana ATCC 700345, complete genome76.0233 %Subject ←→ Query29.5537
NC_009997:2967521*Shewanella baltica OS195, complete genome77.4694 %Subject ←→ Query29.575
NC_009997:5188221Shewanella baltica OS195, complete genome78.4038 %Subject ←→ Query29.6455
NC_009901:3317068Shewanella pealeana ATCC 700345, complete genome75.2696 %Subject ←→ Query29.6662
NC_015633:2565753*Vibrio anguillarum 775 chromosome chromosome I, complete sequence75.2175 %Subject ←→ Query29.7101
NC_008750:807446Shewanella sp. W3-18-1, complete genome77.9933 %Subject ←→ Query29.7696
NC_005810:1976000Yersinia pestis biovar Microtus str. 91001, complete genome75.9589 %Subject ←→ Query29.7909
NC_012968:865465Methylotenera mobilis JLW8, complete genome76.4583 %Subject ←→ Query29.805
NC_005139:518760Vibrio vulnificus YJ016 chromosome I, complete sequence76.4399 %Subject ←→ Query29.8091
NC_010465:2282874Yersinia pseudotuberculosis YPIII, complete genome75.6618 %Subject ←→ Query29.8112
NC_009052:4168776*Shewanella baltica OS155, complete genome78.0607 %Subject ←→ Query29.8197
NC_008750:3435495*Shewanella sp. W3-18-1, complete genome76.6912 %Subject ←→ Query29.9064
NC_004347:3670145*Shewanella oneidensis MR-1, complete genome75.7169 %Subject ←→ Query29.9322
NC_004347:718091Shewanella oneidensis MR-1, complete genome78.7439 %Subject ←→ Query30.0041
NC_009052:2512373Shewanella baltica OS155, complete genome79.9265 %Subject ←→ Query30.0584
NC_003143:1880000Yersinia pestis CO92, complete genome75.867 %Subject ←→ Query30.0766
NC_005810:4045303Yersinia pestis biovar Microtus str. 91001, complete genome75.2696 %Subject ←→ Query30.1313
NC_009654:91096*Marinomonas sp. MWYL1, complete genome77.4326 %Subject ←→ Query30.2225
NC_004347:791897Shewanella oneidensis MR-1, complete genome77.742 %Subject ←→ Query30.2408
NC_007954:334795Shewanella denitrificans OS217, complete genome75.2512 %Subject ←→ Query30.4254
NC_010334:3040589Shewanella halifaxensis HAW-EB4, complete genome78.0974 %Subject ←→ Query30.4925
NC_003910:4234000Colwellia psychrerythraea 34H, complete genome78.652 %Subject ←→ Query30.5236
NC_008345:2717945Shewanella frigidimarina NCIMB 400, complete genome79.2463 %Subject ←→ Query30.5387
NC_008526:565902Lactobacillus casei ATCC 334, complete genome76.443 %Subject ←→ Query30.5707
NC_009997:2635025Shewanella baltica OS195, complete genome79.3689 %Subject ←→ Query30.6571
NC_004347:3197219Shewanella oneidensis MR-1, complete genome75.7292 %Subject ←→ Query30.7018
NC_012968:507988*Methylotenera mobilis JLW8, complete genome76.8719 %Subject ←→ Query30.7369
NC_004347:2668000*Shewanella oneidensis MR-1, complete genome76.6085 %Subject ←→ Query30.8998
NC_009997:2069894Shewanella baltica OS195, complete genome77.0404 %Subject ←→ Query30.9447
NC_009997:3988980Shewanella baltica OS195, complete genome75.9007 %Subject ←→ Query30.9695
NC_013198:394000*Lactobacillus rhamnosus GG, complete genome75.3278 %Subject ←→ Query31.056
NC_008322:2077628*Shewanella sp. MR-7, complete genome75.3585 %Subject ←→ Query31.0943
NC_004347:4541742Shewanella oneidensis MR-1, complete genome78.0515 %Subject ←→ Query31.2642
NC_009052:1899954Shewanella baltica OS155, complete genome76.1887 %Subject ←→ Query31.5886
NC_008577:1015419Shewanella sp. ANA-3 chromosome 1, complete sequence76.2592 %Subject ←→ Query31.5905
NC_011748:4950723*Escherichia coli 55989, complete genome75.2941 %Subject ←→ Query31.6756
CU928145:4950723*Escherichia coli 55989 chromosome, complete genome75.2941 %Subject ←→ Query31.6756
NC_015581:1891409*Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome79.4179 %Subject ←→ Query31.6938
NC_009052:2107692Shewanella baltica OS155, complete genome78.2996 %Subject ←→ Query31.778
NC_009997:685726Shewanella baltica OS195, complete genome75.2512 %Subject ←→ Query31.9374
NC_008322:3585601*Shewanella sp. MR-7, complete genome76.0999 %Subject ←→ Query32.0176
NC_008149:1842500*Yersinia pestis Nepal516, complete genome75.4841 %Subject ←→ Query32.1465
NC_008577:3738758*Shewanella sp. ANA-3 chromosome 1, complete sequence75.4105 %Subject ←→ Query32.1574
NC_004347:4007847Shewanella oneidensis MR-1, complete genome76.4154 %Subject ←→ Query32.3067
NC_008577:1885809*Shewanella sp. ANA-3 chromosome 1, complete sequence75.527 %Subject ←→ Query32.5693
NC_005810:1520000Yersinia pestis biovar Microtus str. 91001, complete genome75.7322 %Subject ←→ Query32.6435
NC_015633:461143Vibrio anguillarum 775 chromosome chromosome I, complete sequence77.8922 %Subject ←→ Query32.6547
NC_008150:1705152*Yersinia pestis Antiqua, complete genome75.6679 %Subject ←→ Query32.6597
NC_008322:2716676Shewanella sp. MR-7, complete genome77.1661 %Subject ←→ Query32.7019
NC_015581:1791658*Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome75.2083 %Subject ←→ Query32.7922
NC_008150:905000Yersinia pestis Antiqua, complete genome75.8609 %Subject ←→ Query33.3319
NC_005810:2180303*Yersinia pestis biovar Microtus str. 91001, complete genome75.1226 %Subject ←→ Query33.5745
NC_008322:1898000*Shewanella sp. MR-7, complete genome79.5221 %Subject ←→ Query33.767
NC_008345:3287000Shewanella frigidimarina NCIMB 400, complete genome79.0594 %Subject ←→ Query33.914
NC_009831:1539159*Shewanella sediminis HAW-EB3, complete genome77.0987 %Subject ←→ Query34.3628
NC_003910:2588000Colwellia psychrerythraea 34H, complete genome77.3683 %Subject ←→ Query34.4966
NC_008321:1523323*Shewanella sp. MR-4, complete genome76.443 %Subject ←→ Query34.601
NC_008577:2402165Shewanella sp. ANA-3 chromosome 1, complete sequence75.4259 %Subject ←→ Query34.8689
NC_002506:822401Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete77.6226 %Subject ←→ Query34.9693
NC_008321:1993541*Shewanella sp. MR-4, complete genome75.7108 %Subject ←→ Query34.9743
NC_015224:1703130Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.4565 %Subject ←→ Query34.9769
NC_008577:2604281Shewanella sp. ANA-3 chromosome 1, complete sequence76.4399 %Subject ←→ Query34.9877
NC_012691:2097287*Tolumonas auensis DSM 9187, complete genome75.3064 %Subject ←→ Query35.9123
NC_015224:1391088Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.6281 %Subject ←→ Query36.0736
NC_015224:3587500Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,76.6912 %Subject Query36.7592
NC_014010:1850500Candidatus Puniceispirillum marinum IMCC1322 chromosome, complete77.4847 %Subject Query36.9283
NC_002505:238569Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete76.2194 %Subject Query39.3701