Pre_GI: OUP Neighbours

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Query: NC_007946:1119000 Escherichia coli UTI89, complete genome

D: 37.8204

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (UTI89) is a uropathogenic strain isolated from a woman with uncomplicated cystitis (bladder inflammation) that has been demonstrated to cause cystitis in a murine urinary tract infection model. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

Number of Neighbours: 107




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_013717:5726Citrobacter rodentium ICC168 plasmid pCROD1, complete sequence81.8842 %Subject Query25.079
CP002797:4656327Escherichia coli NA114, complete genome76.4645 %Subject Query26.8361
NC_011750:1094000Escherichia coli IAI39 chromosome, complete genome75.7966 %Subject ←→ Query28.554
NC_011740:1831845Escherichia fergusonii ATCC 35469, complete genome75.7629 %Subject ←→ Query28.5567
NC_010498:1117938Escherichia coli SMS-3-5, complete genome75.2635 %Subject ←→ Query29.8896
CP002797:4603787*Escherichia coli NA114, complete genome79.2096 %Subject ←→ Query30.3309
NC_007613:1038000Shigella boydii Sb227, complete genome77.8523 %Subject ←→ Query30.5697
NC_007384:3383983Shigella sonnei Ss046, complete genome78.943 %Subject ←→ Query30.7059
NC_007606:4182188*Shigella dysenteriae Sd197, complete genome76.4583 %Subject ←→ Query30.7373
NC_011740:4520373Escherichia fergusonii ATCC 35469, complete genome75.0123 %Subject ←→ Query30.8156
NC_009800:349592*Escherichia coli HS, complete genome77.9351 %Subject ←→ Query30.8783
NC_002655:1103991Escherichia coli O157:H7 EDL933, complete genome80.7567 %Subject ←→ Query31.019
NC_002695:1417912Escherichia coli O157:H7 str. Sakai, complete genome78.4498 %Subject ←→ Query31.3382
NC_008563:2041345Escherichia coli APEC O1, complete genome77.019 %Subject ←→ Query31.3432
AP010958:2455052*Escherichia coli O103:H2 str. 12009 DNA, complete genome77.8676 %Subject ←→ Query31.4202
CU928145:4792703*Escherichia coli 55989 chromosome, complete genome78.4773 %Subject ←→ Query31.6938
NC_011748:4792703*Escherichia coli 55989, complete genome78.4773 %Subject ←→ Query31.6938
CP002797:2062006*Escherichia coli NA114, complete genome77.8431 %Subject ←→ Query31.7624
NC_008253:3122148*Escherichia coli 536, complete genome79.9265 %Subject ←→ Query32.0871
NC_008563:4707826Escherichia coli APEC O1, complete genome80 %Subject ←→ Query32.3018
NC_011750:3545466*Escherichia coli IAI39 chromosome, complete genome80.7721 %Subject ←→ Query32.5632
NC_004741:2009769Shigella flexneri 2a str. 2457T, complete genome75.8609 %Subject ←→ Query32.5875
NC_011750:1565000Escherichia coli IAI39 chromosome, complete genome75.9926 %Subject ←→ Query32.5916
NC_008253:4735418Escherichia coli 536, complete genome78.6918 %Subject ←→ Query32.6562
NC_009801:1756610Escherichia coli E24377A, complete genome75.8854 %Subject ←→ Query32.6826
NC_011750:4947500*Escherichia coli IAI39 chromosome, complete genome75.7782 %Subject ←→ Query32.9361
NC_011750:1978801Escherichia coli IAI39 chromosome, complete genome76.1857 %Subject ←→ Query33.1799
NC_011748:3958572Escherichia coli 55989, complete genome77.3407 %Subject ←→ Query33.3232
CU928145:3958572Escherichia coli 55989 chromosome, complete genome77.3407 %Subject ←→ Query33.3232
NC_008253:4817864Escherichia coli 536, complete genome76.4583 %Subject ←→ Query33.3548
NC_007946:4875997Escherichia coli UTI89, complete genome76.5993 %Subject ←→ Query33.512
NC_011750:4390000Escherichia coli IAI39 chromosome, complete genome76.9914 %Subject ←→ Query33.521
NC_004741:3041294*Shigella flexneri 2a str. 2457T, complete genome80.962 %Subject ←→ Query33.6878
NC_007384:1320287*Shigella sonnei Ss046, complete genome76.6238 %Subject ←→ Query33.904
NC_002695:2655445Escherichia coli O157:H7 str. Sakai, complete genome75.3125 %Subject ←→ Query34.1082
NC_008253:334467*Escherichia coli 536, complete genome80.2543 %Subject ←→ Query34.2564
NC_004431:4319152Escherichia coli CFT073, complete genome78.0821 %Subject ←→ Query34.2595
NC_007946:4779745Escherichia coli UTI89, complete genome80.72 %Subject ←→ Query34.3298
NC_010658:1933605*Shigella boydii CDC 3083-94, complete genome77.7788 %Subject ←→ Query34.3978
NC_007941:11319Escherichia coli UTI89 plasmid pUTI89, complete sequence79.6201 %Subject ←→ Query34.4019
NC_011083:338910Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,76.2837 %Subject ←→ Query34.6863
NC_004431:324000Escherichia coli CFT073, complete genome81.057 %Subject ←→ Query34.8012
NC_002655:2730659Escherichia coli O157:H7 EDL933, complete genome75.4596 %Subject ←→ Query34.8538
NC_008253:296500Escherichia coli 536, complete genome83.0239 %Subject ←→ Query35.2505
NC_014258:355845Pantoea vagans C9-1 plasmid pPag3, complete sequence75.1838 %Subject ←→ Query35.5747
NC_010488:48868Escherichia coli SMS-3-5 plasmid pSMS35_130, complete sequence77.8493 %Subject ←→ Query35.6499
NC_011750:4775770Escherichia coli IAI39 chromosome, complete genome82.4816 %Subject ←→ Query35.7604
NC_014228:3391500Xenorhabdus nematophila ATCC 19061, complete genome76.7953 %Subject ←→ Query35.9268
NC_008563:5011997Escherichia coli APEC O1, complete genome75.242 %Subject ←→ Query35.9385
NC_004431:3040953Escherichia coli CFT073, complete genome76.1274 %Subject ←→ Query35.9589
NC_002695:1794635Escherichia coli O157:H7 str. Sakai, complete genome75.9375 %Subject ←→ Query35.9924
NC_004431:4955658*Escherichia coli CFT073, complete genome76.3664 %Subject ←→ Query36.0161
NC_011083:4547825Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,75.7322 %Subject ←→ Query36.0169
NC_003198:331314Salmonella enterica subsp. enterica serovar Typhi str. CT18,76.4828 %Subject ←→ Query36.1232
NC_011751:1859606Escherichia coli UMN026 chromosome, complete genome75.2237 %Subject ←→ Query36.2006
NC_008563:3332114Escherichia coli APEC O1, complete genome76.8474 %Subject ←→ Query36.3496
NC_009787:17344Escherichia coli E24377A plasmid pETEC_35, complete sequence77.4939 %Subject ←→ Query36.3795
NC_004431:2747237Escherichia coli CFT073, complete genome75.1317 %Subject ←→ Query36.3806
NC_004631:2615908Salmonella enterica subsp. enterica serovar Typhi Ty2, complete78.4161 %Subject ←→ Query36.5722
NC_010067:2529750Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete75.2206 %Subject ←→ Query36.6103
NC_008253:3941938*Escherichia coli 536, complete genome77.8738 %Subject ←→ Query36.7085
CP002797:4775780Escherichia coli NA114, complete genome80.1991 %Subject ←→ Query37.0319
NC_006511:2540500Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC77.7237 %Subject ←→ Query37.0863
NC_014305:66500Erwinia billingiae Eb661 plasmid pEB170, complete sequence75.6403 %Subject ←→ Query37.0879
NC_004431:1211000*Escherichia coli CFT073, complete genome90.3064 %Subject ←→ Query37.0893
NC_002655:1448605Escherichia coli O157:H7 EDL933, complete genome75.7935 %Subject ←→ Query37.1546
NC_004431:1166568Escherichia coli CFT073, complete genome81.9547 %Subject ←→ Query37.2232
NC_006905:326517Salmonella enterica subsp. enterica serovar Choleraesuis str77.7114 %Subject ←→ Query37.465
NC_004431:3409389*Escherichia coli CFT073, complete genome85.864 %Subject ←→ Query37.4762
NC_014228:3534378Xenorhabdus nematophila ATCC 19061, complete genome75.2696 %Subject ←→ Query37.5253
NC_004851:157675Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence76.2714 %Subject ←→ Query37.5608
NC_002695:1364833Escherichia coli O157:H7 str. Sakai, complete genome75.5423 %Subject ←→ Query37.7023
NC_011751:3453683Escherichia coli UMN026 chromosome, complete genome86.3695 %Subject ←→ Query37.7715
NC_009649:94871Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,76.9363 %Subject ←→ Query37.7857
NC_008253:3161311Escherichia coli 536, complete genome78.269 %Subject ←→ Query37.787
NC_002655:1053082Escherichia coli O157:H7 EDL933, complete genome77.3683 %Subject ←→ Query37.8144
AP010958:3853082*Escherichia coli O103:H2 str. 12009 DNA, complete genome78.4865 %Subject ←→ Query37.9582
NC_006511:4465495Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC76.4399 %Subject ←→ Query38.1746
AP010958:2272919Escherichia coli O103:H2 str. 12009 DNA, complete genome77.1538 %Subject ←→ Query38.2003
NC_010102:1779707Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,75.5576 %Subject ←→ Query38.4493
NC_014228:3353896Xenorhabdus nematophila ATCC 19061, complete genome76.6023 %Subject ←→ Query38.8102
NC_002655:3919545Escherichia coli O157:H7 EDL933, complete genome77.2396 %Subject ←→ Query39.1881
NC_014228:3442159Xenorhabdus nematophila ATCC 19061, complete genome76.4277 %Subject ←→ Query39.4354
NC_004431:279868Escherichia coli CFT073, complete genome84.5956 %Subject ←→ Query39.5292
NC_009788:16360Escherichia coli E24377A plasmid pETEC_73, complete sequence75.3952 %Subject ←→ Query39.7806
NC_010554:2872000Proteus mirabilis HI4320, complete genome76.3664 %Subject ←→ Query40.1143
NC_002695:3852233Escherichia coli O157:H7 str. Sakai, complete genome77.3162 %Subject ←→ Query40.3549
NC_014839:170000Pantoea sp. At-9b plasmid pPAT9B02, complete sequence77.5735 %Subject ←→ Query40.4426
NC_002128:35000Escherichia coli O157:H7 str. Sakai plasmid pO157, complete79.2616 %Subject ←→ Query41.037
NC_002695:1571389Escherichia coli O157:H7 str. Sakai, complete genome76.2286 %Subject ←→ Query41.3174
NC_002655:1655944Escherichia coli O157:H7 EDL933, complete genome75.8027 %Subject ←→ Query41.582
NC_011080:333121Salmonella enterica subsp. enterica serovar Newport str. SL254,75.1379 %Subject ←→ Query41.7628
NC_007414:56508Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequence80.2267 %Subject ←→ Query42.1367
NC_015567:346500Serratia sp. AS9 chromosome, complete genome75.8915 %Subject ←→ Query42.2995
NC_009790:42112Escherichia coli E24377A plasmid pETEC_74, complete sequence82.6072 %Subject ←→ Query42.3754
NC_014121:489500Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete77.0649 %Subject ←→ Query42.5869
NC_013716:5201097*Citrobacter rodentium ICC168, complete genome78.8021 %Subject ←→ Query42.6129
NC_014228:3505320Xenorhabdus nematophila ATCC 19061, complete genome77.9197 %Subject ←→ Query42.6617
AP010958:1305712Escherichia coli O103:H2 str. 12009 DNA, complete genome77.5398 %Subject ←→ Query42.7374
NC_011748:3360967*Escherichia coli 55989, complete genome78.1832 %Subject ←→ Query42.7659
CU928145:3360967*Escherichia coli 55989 chromosome, complete genome78.1832 %Subject ←→ Query42.7659
AP010958:5090696*Escherichia coli O103:H2 str. 12009 DNA, complete genome78.2935 %Subject ←→ Query42.8493
AP010958:3627355Escherichia coli O103:H2 str. 12009 DNA, complete genome79.5374 %Subject ←→ Query43.1575
NC_015566:345084Serratia sp. AS12 chromosome, complete genome75.9467 %Subject ←→ Query43.9354
NC_010554:2789722*Proteus mirabilis HI4320, complete genome75.8946 %Subject ←→ Query44.5754
NC_004851:191709Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence81.4154 %Subject ←→ Query44.8472
NC_015963:4500Enterobacter asburiae LF7a plasmid pENTAS01, complete sequence76.8444 %Subject Query47.8868