Pre_GI: OUP Neighbours

Some Help

Query: NC_007912:556000 Saccharophagus degradans 2-40, complete genome

D: 31.1558

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.

Number of Neighbours: 9




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Select all Donors or Recipients for Query Island



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_007912:4364215Saccharophagus degradans 2-40, complete genome81.0968 %Subject ←→ Query30.3016
NC_007912:1924392*Saccharophagus degradans 2-40, complete genome79.6967 %Subject ←→ Query32.0161
NC_007912:4661141*Saccharophagus degradans 2-40, complete genome80.72 %Subject ←→ Query32.0829
NC_007912:4125970Saccharophagus degradans 2-40, complete genome77.2978 %Subject ←→ Query32.4013
NC_007912:909112*Saccharophagus degradans 2-40, complete genome81.8107 %Subject ←→ Query32.624
NC_007912:335500Saccharophagus degradans 2-40, complete genome78.6734 %Subject ←→ Query34.7179
NC_012997:4906423Teredinibacter turnerae T7901, complete genome76.7065 %Subject ←→ Query34.8325
NC_007912:1111093*Saccharophagus degradans 2-40, complete genome77.3192 %Subject ←→ Query36.3859
NC_012997:1820734Teredinibacter turnerae T7901, complete genome77.5888 %Subject ←→ Query36.4788