Pre_GI: OUP Neighbours

Some Help

Query: NC_007912:3403101 Saccharophagus degradans 2-40, complete genome

D: 35.1176

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.

Number of Neighbours: 18

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

Select all Donors or Recipients for Query Island

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_012968:325529Methylotenera mobilis JLW8, complete genome75.5484 %Subject ←→ Query28.4776
NC_013721:1581370*Gardnerella vaginalis 409-05, complete genome76.4553 %Subject ←→ Query29.3242
NC_015276:2804874*Marinomonas mediterranea MMB-1 chromosome, complete genome75.7966 %Subject ←→ Query29.8547
NC_012968:381771*Methylotenera mobilis JLW8, complete genome75.6189 %Subject ←→ Query29.9489
NC_015276:2852010Marinomonas mediterranea MMB-1 chromosome, complete genome75.8824 %Subject ←→ Query30.4475
NC_009654:4624459Marinomonas sp. MWYL1, complete genome75.0184 %Subject ←→ Query30.4991
NC_007912:1173752*Saccharophagus degradans 2-40, complete genome83.6795 %Subject ←→ Query30.7454
NC_008321:458811Shewanella sp. MR-4, complete genome75.818 %Subject ←→ Query31.5836
NC_007912:1231436*Saccharophagus degradans 2-40, complete genome80.5178 %Subject ←→ Query31.6452
NC_007912:1924392*Saccharophagus degradans 2-40, complete genome76.3266 %Subject ←→ Query32.0161
NC_007912:4661141*Saccharophagus degradans 2-40, complete genome77.1538 %Subject ←→ Query32.0829
NC_007912:4125970Saccharophagus degradans 2-40, complete genome75.1777 %Subject ←→ Query32.4013
NC_015276:2171355*Marinomonas mediterranea MMB-1 chromosome, complete genome76.2377 %Subject ←→ Query32.7927
NC_007912:4396972*Saccharophagus degradans 2-40, complete genome75.0643 %Subject ←→ Query34.6738
NC_012997:4621764Teredinibacter turnerae T7901, complete genome75.9406 %Subject ←→ Query34.7405
NC_012997:4906423Teredinibacter turnerae T7901, complete genome75.8487 %Subject ←→ Query34.8325
NC_008577:1690946*Shewanella sp. ANA-3 chromosome 1, complete sequence75.6771 %Subject ←→ Query34.9418
NC_007912:1111093*Saccharophagus degradans 2-40, complete genome78.9737 %Subject ←→ Query36.3859