Pre_GI: OUP Neighbours

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Query: NC_007912:2958000 Saccharophagus degradans 2-40, complete genome

D: 33.4266

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.

Number of Neighbours: 79

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_012039:53497*Campylobacter lari RM2100, complete genome75.5423 %Subject Query14.0412
NC_002163:1471517Campylobacter jejuni subsp. jejuni NCTC 11168, complete genome75.0827 %Subject Query14.7191
NC_008787:437786*Campylobacter jejuni subsp. jejuni 81-176, complete genome75.242 %Subject Query14.7836
NC_003912:472000*Campylobacter jejuni RM1221, complete genome75.2604 %Subject Query14.7921
NC_014802:441000*Campylobacter jejuni subsp. jejuni ICDCCJ07001 chromosome, complete75.0582 %Subject Query15.2501
NC_008787:1582110*Campylobacter jejuni subsp. jejuni 81-176, complete genome75.8701 %Subject Query15.9345
NC_014802:1631483*Campylobacter jejuni subsp. jejuni ICDCCJ07001 chromosome, complete75.5362 %Subject Query16.4463
NC_002163:1607360*Campylobacter jejuni subsp. jejuni NCTC 11168, complete genome75.3125 %Subject Query16.6305
NC_015638:591964*Lacinutrix sp. 5H-3-7-4 chromosome, complete genome75.1409 %Subject Query16.6677
NC_007482:607365Pseudoalteromonas haloplanktis TAC125 chromosome II, complete75.3248 %Subject Query17.0051
NC_003912:1742370*Campylobacter jejuni RM1221, complete genome75.5331 %Subject Query17.1042
NC_014800:329861Pseudoalteromonas sp. SM9913 chromosome chromosome II, complete77.4786 %Subject Query20.5794
NC_014803:475355*Pseudoalteromonas sp. SM9913 chromosome chromosome I, complete75.2053 %Subject Query21.9084
NC_003210:2879906*Listeria monocytogenes EGD-e, complete genome75.144 %Subject Query22.1972
NC_003212:2837366Listeria innocua Clip11262, complete genome76.2837 %Subject Query22.3675
NC_003210:2749538Listeria monocytogenes EGD-e, complete genome75.0797 %Subject Query22.7809
NC_013891:2643085Listeria seeligeri serovar 1/2b str. SLCC3954, complete genome75.3309 %Subject Query22.9815
NC_010184:3213347Bacillus weihenstephanensis KBAB4, complete genome75.0705 %Subject Query23.167
NC_014207:1366766*Methylotenera sp. 301 chromosome, complete genome76.1366 %Subject ←→ Query24.6747
NC_002940:1065246*Haemophilus ducreyi 35000HP, complete genome75.8119 %Subject ←→ Query24.9088
NC_015497:2997275*Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome77.0129 %Subject ←→ Query25.0122
NC_011753:2018500Vibrio splendidus LGP32 chromosome 1, complete genome75.9589 %Subject ←→ Query25.5289
NC_015497:4564339Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome75.8548 %Subject ←→ Query25.6232
NC_015554:2505437*Alteromonas sp. SN2 chromosome, complete genome77.8891 %Subject ←→ Query25.8086
NC_015277:2702056Sphingobacterium sp. 21 chromosome, complete genome75.4871 %Subject ←→ Query26.4413
NC_008228:816000Pseudoalteromonas atlantica T6c, complete genome76.1366 %Subject ←→ Query26.6385
NC_015497:2831148Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome75.6618 %Subject ←→ Query26.9942
NC_011566:1597751Shewanella piezotolerans WP3, complete genome75.0153 %Subject ←→ Query27.0518
NC_011184:597496*Vibrio fischeri MJ11 chromosome I, complete sequence75.1501 %Subject ←→ Query27.0599
NC_012913:626449Aggregatibacter aphrophilus NJ8700, complete genome75.7629 %Subject ←→ Query27.3926
NC_008228:3679949Pseudoalteromonas atlantica T6c, complete genome75.6036 %Subject ←→ Query27.5234
NC_015554:4824000Alteromonas sp. SN2 chromosome, complete genome75.386 %Subject ←→ Query27.5657
NC_015497:1287877Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome78.989 %Subject ←→ Query27.577
NC_007514:1840971*Chlorobium chlorochromatii CaD3, complete genome78.1219 %Subject ←→ Query27.9244
NC_011138:1005872Alteromonas macleodii 'Deep ecotype', complete genome75.7322 %Subject ←→ Query28.0873
NC_008228:1307943Pseudoalteromonas atlantica T6c, complete genome76.9577 %Subject ←→ Query28.1676
NC_010939:1809446*Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete75.4412 %Subject ←→ Query28.1766
NC_008228:1404126Pseudoalteromonas atlantica T6c, complete genome75.6097 %Subject ←→ Query28.2625
NC_013721:533048Gardnerella vaginalis 409-05, complete genome75.5331 %Subject ←→ Query28.7101
NC_011138:2668479Alteromonas macleodii 'Deep ecotype', complete genome76.1489 %Subject ←→ Query28.9792
NC_011138:1374520Alteromonas macleodii 'Deep ecotype', complete genome75.5208 %Subject ←→ Query29.039
NC_007514:1936812*Chlorobium chlorochromatii CaD3, complete genome76.6697 %Subject ←→ Query29.3792
NC_007514:904565Chlorobium chlorochromatii CaD3, complete genome76.3756 %Subject ←→ Query29.4258
NC_009997:3583166Shewanella baltica OS195, complete genome76.8964 %Subject ←→ Query29.4446
NC_015497:4683741*Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome75.4412 %Subject ←→ Query29.5224
NC_004347:3303957Shewanella oneidensis MR-1, complete genome75.2727 %Subject ←→ Query29.572
NC_013456:1819421*Vibrio sp. Ex25 chromosome 1, complete genome75.6127 %Subject ←→ Query29.5743
NC_009379:1910891*Polynucleobacter sp. QLW-P1DMWA-1, complete genome75.1379 %Subject ←→ Query29.604
NC_015633:2565753*Vibrio anguillarum 775 chromosome chromosome I, complete sequence75.337 %Subject ←→ Query29.7101
NC_007514:335085*Chlorobium chlorochromatii CaD3, complete genome76.5349 %Subject ←→ Query29.799
NC_013456:1743046Vibrio sp. Ex25 chromosome 1, complete genome75.6189 %Subject ←→ Query30.0644
NC_004603:1897532Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete75.7966 %Subject ←→ Query30.8799
NC_007912:2697581Saccharophagus degradans 2-40, complete genome77.2763 %Subject ←→ Query30.943
NC_009997:2069894Shewanella baltica OS195, complete genome76.5901 %Subject ←→ Query30.9447
NC_007912:3828980Saccharophagus degradans 2-40, complete genome78.7837 %Subject ←→ Query30.9855
NC_013416:1621469Aggregatibacter actinomycetemcomitans D11S-1, complete genome75.2145 %Subject ←→ Query31.4418
NC_007912:4840682Saccharophagus degradans 2-40, complete genome79.2708 %Subject ←→ Query31.5661
NC_009052:1899954Shewanella baltica OS155, complete genome75.1134 %Subject ←→ Query31.5886
NC_004459:2443000*Vibrio vulnificus CMCP6 chromosome I, complete sequence75.4197 %Subject ←→ Query31.6
NC_011138:105196Alteromonas macleodii 'Deep ecotype', complete genome75.2022 %Subject ←→ Query31.6159
NC_005139:1784000Vibrio vulnificus YJ016 chromosome I, complete sequence75.3799 %Subject ←→ Query31.7867
NC_011026:3009500*Chloroherpeton thalassium ATCC 35110, complete genome75.1532 %Subject ←→ Query31.8736
NC_011026:2533017*Chloroherpeton thalassium ATCC 35110, complete genome75.3094 %Subject ←→ Query31.9226
NC_007912:529500Saccharophagus degradans 2-40, complete genome85.1287 %Subject ←→ Query31.9256
NC_008577:1579950Shewanella sp. ANA-3 chromosome 1, complete sequence77.1017 %Subject ←→ Query32.2252
NC_007912:3921308Saccharophagus degradans 2-40, complete genome80.6097 %Subject ←→ Query32.466
NC_015633:461143Vibrio anguillarum 775 chromosome chromosome I, complete sequence77.4479 %Subject ←→ Query32.6547
NC_007954:3171081*Shewanella denitrificans OS217, complete genome75.4565 %Subject ←→ Query32.7279
NC_005139:2201820*Vibrio vulnificus YJ016 chromosome I, complete sequence75.0674 %Subject ←→ Query33.0058
NC_007912:174733Saccharophagus degradans 2-40, complete genome80.5362 %Subject ←→ Query33.6207
NC_010334:1783500*Shewanella halifaxensis HAW-EB4, complete genome75.7261 %Subject ←→ Query33.9047
NC_009052:3381943Shewanella baltica OS155, complete genome75.2819 %Subject ←→ Query34.4844
NC_003910:2588000Colwellia psychrerythraea 34H, complete genome76.6544 %Subject ←→ Query34.4966
NC_008321:1523323*Shewanella sp. MR-4, complete genome76.8321 %Subject ←→ Query34.601
NC_007912:2303357Saccharophagus degradans 2-40, complete genome83.4804 %Subject ←→ Query34.7145
NC_005139:343500Vibrio vulnificus YJ016 chromosome I, complete sequence78.796 %Subject ←→ Query34.9328
NC_012997:2405500*Teredinibacter turnerae T7901, complete genome76.0172 %Subject ←→ Query36.1474
NC_008322:1595500*Shewanella sp. MR-7, complete genome77.0588 %Subject ←→ Query37.3246
NC_002505:238569Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete76.4491 %Subject ←→ Query39.3701