Pre_GI: OUP Neighbours

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Query: NC_007912:2303357 Saccharophagus degradans 2-40, complete genome

D: 34.7145

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.

Number of Neighbours: 25

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_011753:2018500Vibrio splendidus LGP32 chromosome 1, complete genome76.5533 %Subject ←→ Query25.5289
NC_012913:626449Aggregatibacter aphrophilus NJ8700, complete genome75.6403 %Subject ←→ Query27.3926
NC_015497:1287877Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome76.2929 %Subject ←→ Query27.577
NC_007514:1840971*Chlorobium chlorochromatii CaD3, complete genome77.8646 %Subject ←→ Query27.9244
NC_013721:533048Gardnerella vaginalis 409-05, complete genome75.3125 %Subject ←→ Query28.7101
NC_011138:1374520Alteromonas macleodii 'Deep ecotype', complete genome75.576 %Subject ←→ Query29.039
NC_007514:904565Chlorobium chlorochromatii CaD3, complete genome75.6648 %Subject ←→ Query29.4258
NC_013456:1819421*Vibrio sp. Ex25 chromosome 1, complete genome77.0711 %Subject ←→ Query29.5743
NC_013456:1743046Vibrio sp. Ex25 chromosome 1, complete genome75.6863 %Subject ←→ Query30.0644
NC_004603:1897532Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete76.5809 %Subject ←→ Query30.8799
NC_007912:2697581Saccharophagus degradans 2-40, complete genome75.6648 %Subject ←→ Query30.943
NC_009997:2069894Shewanella baltica OS195, complete genome76.1734 %Subject ←→ Query30.9447
NC_007912:3828980Saccharophagus degradans 2-40, complete genome77.2273 %Subject ←→ Query30.9855
NC_007912:4840682Saccharophagus degradans 2-40, complete genome78.0147 %Subject ←→ Query31.5661
NC_004459:2443000*Vibrio vulnificus CMCP6 chromosome I, complete sequence75.7567 %Subject ←→ Query31.6
NC_005139:1784000Vibrio vulnificus YJ016 chromosome I, complete sequence75.6924 %Subject ←→ Query31.7867
NC_007912:529500Saccharophagus degradans 2-40, complete genome85.576 %Subject ←→ Query31.9256
NC_009654:3316458*Marinomonas sp. MWYL1, complete genome75.5423 %Subject ←→ Query32.1528
NC_007912:3921308Saccharophagus degradans 2-40, complete genome77.1967 %Subject ←→ Query32.466
NC_007912:2958000*Saccharophagus degradans 2-40, complete genome83.4804 %Subject ←→ Query33.4266
NC_007912:174733Saccharophagus degradans 2-40, complete genome76.8842 %Subject ←→ Query33.6207
NC_010334:1783500*Shewanella halifaxensis HAW-EB4, complete genome75.5729 %Subject ←→ Query33.9047
NC_008321:1523323*Shewanella sp. MR-4, complete genome76.4216 %Subject ←→ Query34.601
NC_005139:343500Vibrio vulnificus YJ016 chromosome I, complete sequence75.4994 %Subject ←→ Query34.9328
NC_008322:1595500*Shewanella sp. MR-7, complete genome75.8824 %Subject ←→ Query37.3246