Pre_GI: OUP Neighbours

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Query: NC_007912:1173752 Saccharophagus degradans 2-40, complete genome

D: 30.7454

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.

Number of Neighbours: 7




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_012968:325529Methylotenera mobilis JLW8, complete genome75.4228 %Subject ←→ Query28.4776
NC_013721:1581370*Gardnerella vaginalis 409-05, complete genome76.8934 %Subject ←→ Query29.3242
NC_012968:381771*Methylotenera mobilis JLW8, complete genome75.2114 %Subject ←→ Query29.9489
NC_012968:1731976*Methylotenera mobilis JLW8, complete genome75.4871 %Subject ←→ Query30.4292
NC_013721:430000*Gardnerella vaginalis 409-05, complete genome75.9743 %Subject ←→ Query31.6209
NC_007912:1231436*Saccharophagus degradans 2-40, complete genome84.3137 %Subject ←→ Query31.6452
NC_007912:3403101*Saccharophagus degradans 2-40, complete genome83.6795 %Subject ←→ Query35.1176