Pre_GI: OUP Neighbours

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Query: NC_007604:41495 Synechococcus elongatus PCC 7942, complete genome

D: 44.7466

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: This strain is a freshwater organism and is extensively studied due to its circadian clock which controls the expression of upwards of 800 genes during a 24 hour period. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.

Number of Neighbours: 29

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_011884:2397248Cyanothece sp. PCC 7425, complete genome75.7414 %Subject Query27.4015
NC_011884:1591430Cyanothece sp. PCC 7425, complete genome75.2574 %Subject Query27.6933
NC_007604:1183497Synechococcus elongatus PCC 7942, complete genome82.0803 %Subject Query28.0399
NC_007604:168176Synechococcus elongatus PCC 7942, complete genome77.6409 %Subject Query28.1524
NC_006576:414696Synechococcus elongatus PCC 6301, complete genome81.4706 %Subject Query29.5841
NC_011884:2921618Cyanothece sp. PCC 7425, complete genome76.8566 %Subject Query30.5083
NC_006576:1435422Synechococcus elongatus PCC 6301, complete genome79.4914 %Subject Query31.0329
NC_008820:2422000Prochlorococcus marinus str. MIT 9303, complete genome76.2255 %Subject Query31.3534
NC_006576:2610565*Synechococcus elongatus PCC 6301, complete genome78.462 %Subject Query32.4351
NC_007604:1442500Synechococcus elongatus PCC 7942, complete genome81.0202 %Subject Query33.1617
NC_007604:1383192*Synechococcus elongatus PCC 7942, complete genome80.7047 %Subject Query33.2502
NC_005071:2180000*Prochlorococcus marinus str. MIT 9313, complete genome76.9516 %Subject Query33.4729
NC_006576:161112Synechococcus elongatus PCC 6301, complete genome80.5484 %Subject Query33.8572
NC_007604:1586243*Synechococcus elongatus PCC 7942, complete genome81.78 %Subject Query33.923
NC_006576:2683467Synechococcus elongatus PCC 6301, complete genome81.1029 %Subject Query34.6581
NC_006576:2073163Synechococcus elongatus PCC 6301, complete genome82.1507 %Subject ←→ Query35.0481
NC_007604:1875268*Synechococcus elongatus PCC 7942, complete genome79.2371 %Subject ←→ Query35.572
NC_006576:217697Synechococcus elongatus PCC 6301, complete genome80.818 %Subject ←→ Query35.6639
NC_007604:2213659Synechococcus elongatus PCC 7942, complete genome81.3572 %Subject ←→ Query35.9302
NC_006576:12230*Synechococcus elongatus PCC 6301, complete genome77.1844 %Subject ←→ Query36.2947
NC_006576:1743500*Synechococcus elongatus PCC 6301, complete genome79.1728 %Subject ←→ Query36.7017
NC_007604:1967770Synechococcus elongatus PCC 7942, complete genome79.6048 %Subject ←→ Query37.3099
NC_006576:2423250Synechococcus elongatus PCC 6301, complete genome78.4252 %Subject ←→ Query37.6034
NC_006576:2328427Synechococcus elongatus PCC 6301, complete genome79.2586 %Subject ←→ Query37.7448
NC_007604:2555000*Synechococcus elongatus PCC 7942, complete genome77.5214 %Subject ←→ Query37.9152
NC_007604:1145373*Synechococcus elongatus PCC 7942, complete genome82.7635 %Subject ←→ Query38.5822
NC_006576:456569*Synechococcus elongatus PCC 6301, complete genome82.9841 %Subject ←→ Query39.2636
NC_007604:743738*Synechococcus elongatus PCC 7942, complete genome75.3493 %Subject ←→ Query45.8397
NC_006576:1551939*Synechococcus elongatus PCC 6301, complete genome90.9191 %Subject ←→ Query46.8548