Pre_GI: OUP Neighbours

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Query: NC_007604:1967770 Synechococcus elongatus PCC 7942, complete genome

D: 37.3099

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: This strain is a freshwater organism and is extensively studied due to its circadian clock which controls the expression of upwards of 800 genes during a 24 hour period. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.

Number of Neighbours: 28




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_009926:193821*Acaryochloris marina MBIC11017 plasmid pREB1, complete sequence77.4571 %Subject ←→ Query38.1992
NC_005773:866157*Pseudomonas syringae pv. phaseolicola 1448A, complete genome75.3891 %Subject ←→ Query31.8962
NC_007005:1636875Pseudomonas syringae pv. syringae B728a, complete genome75.4381 %Subject ←→ Query31.3458
NC_004578:5336773*Pseudomonas syringae pv. tomato str. DC3000, complete genome75.4779 %Subject ←→ Query31.4169
NC_006576:1743500*Synechococcus elongatus PCC 6301, complete genome81.1489 %Subject ←→ Query36.7017
NC_006576:2683467Synechococcus elongatus PCC 6301, complete genome81.1857 %Subject ←→ Query34.6581
NC_006576:161112Synechococcus elongatus PCC 6301, complete genome81.152 %Subject ←→ Query33.8572
NC_006576:2610565*Synechococcus elongatus PCC 6301, complete genome82.4112 %Subject ←→ Query32.4351
NC_006576:1551939*Synechococcus elongatus PCC 6301, complete genome75.2053 %Subject ←→ Query46.8548
NC_006576:2423250Synechococcus elongatus PCC 6301, complete genome83.3793 %Subject ←→ Query37.6034
NC_006576:1435422Synechococcus elongatus PCC 6301, complete genome83.5876 %Subject ←→ Query31.0329
NC_006576:2328427Synechococcus elongatus PCC 6301, complete genome91.6391 %Subject ←→ Query37.7448
NC_006576:12230*Synechococcus elongatus PCC 6301, complete genome81.4645 %Subject ←→ Query36.2947
NC_006576:217697Synechococcus elongatus PCC 6301, complete genome82.598 %Subject ←→ Query35.6639
NC_006576:456569*Synechococcus elongatus PCC 6301, complete genome83.6795 %Subject ←→ Query39.2636
NC_006576:2073163Synechococcus elongatus PCC 6301, complete genome81.1305 %Subject ←→ Query35.0481
NC_006576:414696Synechococcus elongatus PCC 6301, complete genome82.742 %Subject ←→ Query29.5841
NC_007604:1442500Synechococcus elongatus PCC 7942, complete genome83.5601 %Subject ←→ Query33.1617
NC_007604:41495Synechococcus elongatus PCC 7942, complete genome79.6048 %Subject ←→ Query44.7466
NC_007604:1383192*Synechococcus elongatus PCC 7942, complete genome79.856 %Subject ←→ Query33.2502
NC_007604:2555000*Synechococcus elongatus PCC 7942, complete genome83.2047 %Subject ←→ Query37.9152
NC_007604:1183497Synechococcus elongatus PCC 7942, complete genome81.3971 %Subject ←→ Query28.0399
NC_007604:2213659Synechococcus elongatus PCC 7942, complete genome81.6299 %Subject ←→ Query35.9302
NC_007604:1145373*Synechococcus elongatus PCC 7942, complete genome82.1783 %Subject ←→ Query38.5822
NC_007604:1875268*Synechococcus elongatus PCC 7942, complete genome83.4007 %Subject ←→ Query35.572
NC_007604:168176Synechococcus elongatus PCC 7942, complete genome83.7898 %Subject ←→ Query28.1524
NC_007604:1586243*Synechococcus elongatus PCC 7942, complete genome82.3284 %Subject ←→ Query33.923
NC_007604:743738*Synechococcus elongatus PCC 7942, complete genome82.5214 %Subject ←→ Query45.8397