Pre_GI: OUP Neighbours

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Query: NC_007517:1676604 Geobacter metallireducens GS-15, complete genome

D: 45.6997

Host Lineage: Geobacter metallireducens; Geobacter; Geobacteraceae; Desulfuromonadales; Proteobacteria; Bacteria

General Information: First isolated from the Potomac river downstream of Washington, DC, USA in 1987. This organism actively moves towards metal attractants such as iron and manganese oxides, which are insoluble, and produces type IV pili for attachment to the insoluble substrates. Common metal-reducing bacterium. This organism, similar to what is observed in Geobacteria sulfurreducens, couples the oxidation of organic molecules to the reduction of iron by using insoluble Fe (III) as an electron acceptor under anaerobic conditions. This bacterium plays an imporant part of the nutrient cycling in aquatic environments. The cell can also use uranium and plutonium, therefore, this organism and may be important for the bioremediation of contaminated waste sites.

Number of Neighbours: 80

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_015593:1587684Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete75.9559 %Subject Query20.2851
NC_008254:3980327Mesorhizobium sp. BNC1, complete genome75.2788 %Subject Query22.9207
NC_014216:2027017Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome75.4228 %Subject Query24.8115
NC_007298:2947200*Dechloromonas aromatica RCB, complete genome75.046 %Subject Query24.8966
NC_015850:1155376*Acidithiobacillus caldus SM-1 chromosome, complete genome75.8885 %Subject Query25.4029
NC_008358:2257787Hyphomonas neptunium ATCC 15444, complete genome75.4075 %Subject Query25.4469
NC_006677:1596560*Gluconobacter oxydans 621H, complete genome77.6716 %Subject Query25.474
NC_008254:3143770Mesorhizobium sp. BNC1, complete genome76.5502 %Subject Query25.6997
NC_008358:2574343Hyphomonas neptunium ATCC 15444, complete genome75.1287 %Subject Query25.9598
NC_008358:1789816*Hyphomonas neptunium ATCC 15444, complete genome75.8487 %Subject Query26.7364
NC_007614:2517226Nitrosospira multiformis ATCC 25196 chromosome 1, complete75.8456 %Subject Query27.0586
NC_007298:1129889*Dechloromonas aromatica RCB, complete genome76.1121 %Subject Query27.3468
NC_015186:535727Acidiphilium multivorum AIU301, complete genome76.1244 %Subject Query27.3549
NC_014844:2158318Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome75.0797 %Subject Query27.7359
NC_007298:778723Dechloromonas aromatica RCB, complete genome76.2898 %Subject Query27.8158
NC_002932:296557*Chlorobium tepidum TLS, complete genome76.4124 %Subject Query27.8605
NC_011206:2040000Acidithiobacillus ferrooxidans ATCC 53993, complete genome76.0601 %Subject Query28.0156
NC_012483:1408500*Acidobacterium capsulatum ATCC 51196, complete genome75.2727 %Subject Query28.129
NC_014355:2210884*Candidatus Nitrospira defluvii, complete genome75.7567 %Subject Query28.2753
NC_014355:880856*Candidatus Nitrospira defluvii, complete genome76.3358 %Subject Query28.4373
NC_015850:1006980Acidithiobacillus caldus SM-1 chromosome, complete genome77.7911 %Subject Query28.5212
NC_007761:781210*Rhizobium etli CFN 42, complete genome76.2561 %Subject Query28.9946
NC_011206:2239109Acidithiobacillus ferrooxidans ATCC 53993, complete genome75.383 %Subject Query29.043
NC_007298:1418500*Dechloromonas aromatica RCB, complete genome76.6452 %Subject Query29.1305
NC_016027:2580477Gluconacetobacter xylinus NBRC 3288, complete genome75.2451 %Subject Query29.2161
NC_014355:1865003Candidatus Nitrospira defluvii, complete genome77.8033 %Subject Query29.2889
NC_014355:781537Candidatus Nitrospira defluvii, complete genome75.5208 %Subject Query29.6445
NC_011206:1293880Acidithiobacillus ferrooxidans ATCC 53993, complete genome75.7782 %Subject Query30.2438
NC_007618:1593886*Brucella melitensis biovar Abortus 2308 chromosome I, complete75.1808 %Subject Query30.4248
NC_010742:1595065*Brucella abortus S19 chromosome 1, complete sequence75.2022 %Subject Query30.4911
NC_006677:2402282*Gluconobacter oxydans 621H, complete genome76.4767 %Subject Query30.6703
NC_014972:3000138*Desulfobulbus propionicus DSM 2032 chromosome, complete genome77.2978 %Subject Query30.6846
NC_003317:392271*Brucella melitensis 16M chromosome I, complete sequence76.2286 %Subject Query30.741
NC_010169:1599936*Brucella suis ATCC 23445 chromosome I, complete sequence76.2255 %Subject Query30.9754
NC_011206:123791Acidithiobacillus ferrooxidans ATCC 53993, complete genome75.9651 %Subject Query30.9901
NC_003305:1297785*Agrobacterium tumefaciens str. C58 chromosome linear, complete75.6005 %Subject Query31.0217
NC_015593:2841856*Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete75.7016 %Subject Query31.1538
NC_014098:3372000*Bacillus tusciae DSM 2912 chromosome, complete genome76.8321 %Subject Query31.2573
NC_010740:1051000*Brucella abortus S19 chromosome 2, complete sequence76.3664 %Subject Query31.6153
NC_004311:1096649*Brucella suis 1330 chromosome II, complete sequence75.3585 %Subject Query32.3155
NC_014972:2503107Desulfobulbus propionicus DSM 2032 chromosome, complete genome76.633 %Subject Query32.3164
NC_014972:3227500*Desulfobulbus propionicus DSM 2032 chromosome, complete genome76.1857 %Subject Query32.3488
NC_010104:1096081*Brucella canis ATCC 23365 chromosome II, complete sequence75.2237 %Subject Query32.4948
NC_007624:1046500*Brucella melitensis biovar Abortus 2308 chromosome II, complete76.2408 %Subject Query32.7278
NC_013173:1305916Desulfomicrobium baculatum DSM 4028, complete genome75.2175 %Subject Query32.7436
NC_014323:3976351Herbaspirillum seropedicae SmR1 chromosome, complete genome75.4197 %Subject Query33.063
NC_006933:1051873*Brucella abortus biovar 1 str. 9-941 chromosome II, complete75.2543 %Subject Query33.0765
NC_013173:302375*Desulfomicrobium baculatum DSM 4028, complete genome76.3542 %Subject Query33.078
NC_008358:798390Hyphomonas neptunium ATCC 15444, complete genome76.2531 %Subject Query33.231
NC_002932:937157Chlorobium tepidum TLS, complete genome76.9455 %Subject Query33.2928
NC_011027:136954*Chlorobaculum parvum NCIB 8327, complete genome75.0092 %Subject Query33.2989
NC_003318:183914*Brucella melitensis 16M chromosome II, complete sequence75.6005 %Subject Query33.4885
NC_007498:3085511*Pelobacter carbinolicus DSM 2380, complete genome78.6244 %Subject Query33.6029
NC_014216:2054860Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome76.3205 %Subject Query33.6397
NC_013173:2305394*Desulfomicrobium baculatum DSM 4028, complete genome76.6667 %Subject Query33.7366
NC_008740:3520500*Marinobacter aquaeolei VT8, complete genome75.4963 %Subject Query33.8076
NC_013118:1109610*Brucella microti CCM 4915 chromosome 2, complete genome75.4013 %Subject Query33.8197
NC_008343:2389710Granulibacter bethesdensis CGDNIH1, complete genome75.9467 %Subject Query34.0079
NC_011206:200000Acidithiobacillus ferrooxidans ATCC 53993, complete genome77.2733 %Subject Query34.1713
NC_013173:2507516Desulfomicrobium baculatum DSM 4028, complete genome77.2825 %Subject Query34.1865
NC_013173:1259898Desulfomicrobium baculatum DSM 4028, complete genome77.1844 %Subject Query34.2124
NC_011206:262844*Acidithiobacillus ferrooxidans ATCC 53993, complete genome75.1532 %Subject Query34.2175
NC_011206:1264639Acidithiobacillus ferrooxidans ATCC 53993, complete genome76.6115 %Subject Query34.3755
NC_010125:2483122Gluconacetobacter diazotrophicus PAl 5, complete genome75.2911 %Subject Query34.4431
NC_011206:1233985Acidithiobacillus ferrooxidans ATCC 53993, complete genome76.4553 %Subject Query34.8359
NC_002939:805794Geobacter sulfurreducens PCA, complete genome75.0919 %Subject Query34.9945
NC_007626:1038214Magnetospirillum magneticum AMB-1, complete genome78.3578 %Subject Query35.2809
NC_008343:1699132Granulibacter bethesdensis CGDNIH1, complete genome76.5656 %Subject Query35.3703
NC_014098:1258559Bacillus tusciae DSM 2912 chromosome, complete genome76.5196 %Subject Query35.6349
NC_007498:1072112Pelobacter carbinolicus DSM 2380, complete genome75.3891 %Subject ←→ Query36.33
NC_014972:2328228Desulfobulbus propionicus DSM 2032 chromosome, complete genome78.799 %Subject ←→ Query37.6789
NC_013173:1231213Desulfomicrobium baculatum DSM 4028, complete genome78.1771 %Subject ←→ Query38.4372
NC_005085:2014987Chromobacterium violaceum ATCC 12472, complete genome75.2849 %Subject ←→ Query39.4063
NC_007498:197810Pelobacter carbinolicus DSM 2380, complete genome77.8033 %Subject ←→ Query39.7482
NC_007626:2354260Magnetospirillum magneticum AMB-1, complete genome77.6317 %Subject ←→ Query39.8874
NC_013173:2261396*Desulfomicrobium baculatum DSM 4028, complete genome77.9259 %Subject ←→ Query40.3898
NC_013173:815696*Desulfomicrobium baculatum DSM 4028, complete genome77.0006 %Subject ←→ Query42.1062
NC_007498:357484Pelobacter carbinolicus DSM 2380, complete genome80.3738 %Subject ←→ Query43.1192
NC_007493:1672163*Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence76.3388 %Subject ←→ Query43.5713
NC_014972:3688000*Desulfobulbus propionicus DSM 2032 chromosome, complete genome75.4105 %Subject ←→ Query47.3354