Pre_GI: OUP Neighbours

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Query: NC_007517:1561466 Geobacter metallireducens GS-15, complete genome

D: 43.7838

Host Lineage: Geobacter metallireducens; Geobacter; Geobacteraceae; Desulfuromonadales; Proteobacteria; Bacteria

General Information: First isolated from the Potomac river downstream of Washington, DC, USA in 1987. This organism actively moves towards metal attractants such as iron and manganese oxides, which are insoluble, and produces type IV pili for attachment to the insoluble substrates. Common metal-reducing bacterium. This organism, similar to what is observed in Geobacteria sulfurreducens, couples the oxidation of organic molecules to the reduction of iron by using insoluble Fe (III) as an electron acceptor under anaerobic conditions. This bacterium plays an imporant part of the nutrient cycling in aquatic environments. The cell can also use uranium and plutonium, therefore, this organism and may be important for the bioremediation of contaminated waste sites.

Number of Neighbours: 41




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_002932:296557*Chlorobium tepidum TLS, complete genome77.0803 %Subject Query27.8605
NC_007512:2024880*Pelodictyon luteolum DSM 273, complete genome77.9657 %Subject Query28.5849
NC_014973:2894248Geobacter sp. M18 chromosome, complete genome75.2911 %Subject Query29.0035
NC_007298:1418500*Dechloromonas aromatica RCB, complete genome75.9283 %Subject Query29.1305
NC_002939:1926084*Geobacter sulfurreducens PCA, complete genome76.7034 %Subject Query29.5811
NC_007517:2564361Geobacter metallireducens GS-15, complete genome80.0797 %Subject Query30.6025
NC_007517:1998342Geobacter metallireducens GS-15, complete genome76.9179 %Subject Query30.8244
NC_007517:1515493*Geobacter metallireducens GS-15, complete genome77.7206 %Subject Query30.9545
NC_007498:1666242*Pelobacter carbinolicus DSM 2380, complete genome75.4228 %Subject Query30.9764
NC_013223:1848689*Desulfohalobium retbaense DSM 5692, complete genome77.0282 %Subject Query31.0486
NC_007517:1792000*Geobacter metallireducens GS-15, complete genome79.4271 %Subject Query31.934
NC_015738:36295*Eggerthella sp. YY7918, complete genome75.3002 %Subject Query33.159
NC_002932:937157Chlorobium tepidum TLS, complete genome75.2114 %Subject Query33.2928
NC_007517:2055305*Geobacter metallireducens GS-15, complete genome78.8205 %Subject Query33.5061
NC_007498:3085511*Pelobacter carbinolicus DSM 2380, complete genome76.0263 %Subject Query33.6029
NC_011979:3712845*Geobacter sp. FRC-32, complete genome75.4688 %Subject ←→ Query34.2534
NC_014098:2971011Bacillus tusciae DSM 2912 chromosome, complete genome76.7616 %Subject ←→ Query34.2753
NC_011060:459615Pelodictyon phaeoclathratiforme BU-1, complete genome78.3517 %Subject ←→ Query34.6364
NC_014972:2328228Desulfobulbus propionicus DSM 2032 chromosome, complete genome78.364 %Subject ←→ Query37.6789
NC_011059:65414*Prosthecochloris aestuarii DSM 271, complete genome76.2776 %Subject ←→ Query38.0058
NC_008609:112340*Pelobacter propionicus DSM 2379, complete genome77.5827 %Subject ←→ Query38.4837
NC_012796:2041579*Desulfovibrio magneticus RS-1, complete genome76.5257 %Subject ←→ Query38.6439
NC_007517:3751107*Geobacter metallireducens GS-15, complete genome76.9179 %Subject ←→ Query38.9219
NC_008463:2017607*Pseudomonas aeruginosa UCBPP-PA14, complete genome75.1226 %Subject ←→ Query39.6255
NC_013173:2261396*Desulfomicrobium baculatum DSM 4028, complete genome76.4737 %Subject ←→ Query40.3898
NC_007517:2342607Geobacter metallireducens GS-15, complete genome76.8842 %Subject ←→ Query40.4567
NC_002939:1634843*Geobacter sulfurreducens PCA, complete genome84.0165 %Subject ←→ Query40.9168
NC_007517:687276*Geobacter metallireducens GS-15, complete genome75.9804 %Subject ←→ Query40.9768
NC_011027:1971580Chlorobaculum parvum NCIB 8327, complete genome75.4994 %Subject ←→ Query41.2828
NC_007517:2241104Geobacter metallireducens GS-15, complete genome82.9963 %Subject ←→ Query42.1264
NC_014098:850000Bacillus tusciae DSM 2912 chromosome, complete genome75.0705 %Subject ←→ Query42.3425
NC_007498:357484Pelobacter carbinolicus DSM 2380, complete genome77.2243 %Subject ←→ Query43.1192
NC_011146:482440*Geobacter bemidjiensis Bem, complete genome75.3768 %Subject ←→ Query43.6501
NC_012796:4693500Desulfovibrio magneticus RS-1, complete genome75.0306 %Subject ←→ Query44.5279
NC_008609:2254392Pelobacter propionicus DSM 2379, complete genome75.6127 %Subject ←→ Query45.7892
NC_010794:303203*Methylacidiphilum infernorum V4, complete genome75.5699 %Subject ←→ Query46.5936
NC_007517:3524715Geobacter metallireducens GS-15, complete genome75.6127 %Subject ←→ Query47.0731
NC_008609:251608Pelobacter propionicus DSM 2379, complete genome76.6851 %Subject ←→ Query48.2801
NC_007516:1086948*Synechococcus sp. CC9605, complete genome75.5116 %Subject ←→ Query48.4699
NC_008609:2643000Pelobacter propionicus DSM 2379, complete genome75.6863 %Subject ←→ Query50.679
NC_012796:1645856*Desulfovibrio magneticus RS-1, complete genome75.2788 %Subject ←→ Query53.6076