Pre_GI: OUP Neighbours

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Query: NC_007517:1468719 Geobacter metallireducens GS-15, complete genome

D: 54.2759

Host Lineage: Geobacter metallireducens; Geobacter; Geobacteraceae; Desulfuromonadales; Proteobacteria; Bacteria

General Information: First isolated from the Potomac river downstream of Washington, DC, USA in 1987. This organism actively moves towards metal attractants such as iron and manganese oxides, which are insoluble, and produces type IV pili for attachment to the insoluble substrates. Common metal-reducing bacterium. This organism, similar to what is observed in Geobacteria sulfurreducens, couples the oxidation of organic molecules to the reduction of iron by using insoluble Fe (III) as an electron acceptor under anaerobic conditions. This bacterium plays an imporant part of the nutrient cycling in aquatic environments. The cell can also use uranium and plutonium, therefore, this organism and may be important for the bioremediation of contaminated waste sites.

Number of Neighbours: 22




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_010831:40000Chlorobium phaeobacteroides BS1, complete genome75.3125 %Subject Query29.6632
NC_007517:2515870Geobacter metallireducens GS-15, complete genome77.9963 %Subject Query30.9643
NC_007498:1491223*Pelobacter carbinolicus DSM 2380, complete genome75.0674 %Subject Query31.6786
NC_007614:2764848*Nitrosospira multiformis ATCC 25196 chromosome 1, complete77.0558 %Subject Query31.8612
NC_007759:2146254Syntrophus aciditrophicus SB, complete genome75.4963 %Subject Query32.8649
NC_007498:919697Pelobacter carbinolicus DSM 2380, complete genome76.0907 %Subject Query32.9516
NC_007759:2638992Syntrophus aciditrophicus SB, complete genome79.9173 %Subject Query33.2685
NC_007759:623116Syntrophus aciditrophicus SB, complete genome76.9271 %Subject Query33.7001
NC_007498:1848437Pelobacter carbinolicus DSM 2380, complete genome77.5521 %Subject Query33.8157
NC_007759:1666967*Syntrophus aciditrophicus SB, complete genome77.8615 %Subject Query34.081
NC_010831:931961Chlorobium phaeobacteroides BS1, complete genome75.0797 %Subject Query34.2716
NC_014972:322056Desulfobulbus propionicus DSM 2032 chromosome, complete genome79.1942 %Subject Query36.0433
NC_014364:2904443Spirochaeta smaragdinae DSM 11293 chromosome, complete genome77.5368 %Subject Query36.9333
NC_007498:2475781Pelobacter carbinolicus DSM 2380, complete genome76.3879 %Subject Query36.9884
NC_013173:2884887*Desulfomicrobium baculatum DSM 4028, complete genome75.7721 %Subject Query38.7798
NC_007498:1148249*Pelobacter carbinolicus DSM 2380, complete genome76.0417 %Subject Query41.2181
NC_007759:2608173Syntrophus aciditrophicus SB, complete genome79.136 %Subject Query41.8718
NC_011979:2352961*Geobacter sp. FRC-32, complete genome76.3174 %Subject Query43.5464
NC_007759:415456Syntrophus aciditrophicus SB, complete genome79.614 %Subject ←→ Query44.5461
NC_011979:1590432*Geobacter sp. FRC-32, complete genome75.579 %Subject ←→ Query45.0636
NC_007498:134442Pelobacter carbinolicus DSM 2380, complete genome75.9773 %Subject ←→ Query45.1058
NC_007498:2087811Pelobacter carbinolicus DSM 2380, complete genome75.6464 %Subject ←→ Query48.6512