Pre_GI: OUP Neighbours

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Query: NC_007146:1405459 Haemophilus influenzae 86-028NP, complete genome

D: 27.2204

Host Lineage: Haemophilus influenzae; Haemophilus; Pasteurellaceae; Pasteurellales; Proteobacteria; Bacteria

General Information: This nontypeable strain is a clinical isolate from a pediatric patient with otitis media from Columbus Children's Hospital. Causes respiratory tract infections primarily in children. A group of organisms that are either obligate parasites or commensal organisms found in animal mucous membranes. Almost all species require the presence of important growth factors found in the blood of their hosts, including either X factor (protoporphyrin IX or heme) or V factor (nicotinamide adenine dinucleotide (NAD or NADP)). This organism was first isolated in the 1890s during an influenza pandemic by Pfeiffer, and was originally thought to be the source of influenza, although later it was shown to be a secondary pathogen and may be synergistic with the influenza virus. This bacterium is one of the leading causes of meningitis in young children, and it may also cause septicemia, otitis media (inflammation of the middle ear), sinusitis (inflammation of the sinus cavity) and chronic bronchitis. It is highly adapted to its human host and typically lives in the nasopharynx and is a major cause of lower respiratory infections in infants and small children in developing countries (type 1b strain), although vaccine use has resulted in the decline of infections. The encapsulated organism can penetrate the blood and avoid both phagocytosis and complement-mediated lysis. All known strains produce neuraminidase and an IgA protease as well as fimbrial adhesins for attachment.

Number of Neighbours: 165

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_016001:3267772Flavobacterium branchiophilum, complete genome75.818 %Subject Query16.7113
NC_016011:2875747Listeria ivanovii subsp. ivanovii PAM 55, complete genome76.4553 %Subject Query16.7194
NC_015144:237467Weeksella virosa DSM 16922 chromosome, complete genome75.7047 %Subject ←→ Query17.8296
NC_012121:837586*Staphylococcus carnosus subsp. carnosus TM300, complete genome75.4013 %Subject ←→ Query18.5353
NC_013893:1723939Staphylococcus lugdunensis HKU09-01 chromosome, complete genome76.7341 %Subject ←→ Query18.7986
NC_009782:2519379Staphylococcus aureus subsp. aureus Mu3, complete genome76.0049 %Subject ←→ Query19.0905
NC_010079:2510951Staphylococcus aureus subsp. aureus USA300_TCH1516, complete75.5116 %Subject ←→ Query19.285
NC_002953:2032278Staphylococcus aureus subsp. aureus MSSA476, complete genome75.1317 %Subject ←→ Query19.3185
NC_003923:2053510Staphylococcus aureus subsp. aureus MW2, complete genome75.1072 %Subject ←→ Query19.3438
NC_002758:2515310Staphylococcus aureus subsp. aureus Mu50, complete genome75.769 %Subject ←→ Query19.3641
NC_007795:2455468Staphylococcus aureus subsp. aureus NCTC 8325, complete genome75.239 %Subject ←→ Query19.51
NC_007793:2510801Staphylococcus aureus subsp. aureus USA300, complete genome75.5116 %Subject ←→ Query19.514
NC_007622:271673Staphylococcus aureus RF122, complete genome75.098 %Subject ←→ Query19.5282
NC_002953:2435667Staphylococcus aureus subsp. aureus MSSA476, complete genome75.7077 %Subject ←→ Query19.5558
NC_012121:139741*Staphylococcus carnosus subsp. carnosus TM300, complete genome76.8321 %Subject ←→ Query19.5674
NC_012121:1894148Staphylococcus carnosus subsp. carnosus TM300, complete genome75.1838 %Subject ←→ Query19.5799
NC_003923:2460130Staphylococcus aureus subsp. aureus MW2, complete genome75.9007 %Subject ←→ Query19.6528
NC_014136:1879049Leuconostoc kimchii IMSNU11154 chromosome, complete genome75.0184 %Subject ←→ Query19.7228
NC_002745:2446722Staphylococcus aureus subsp. aureus N315, complete genome75.9743 %Subject ←→ Query19.7881
NC_015144:124500Weeksella virosa DSM 16922 chromosome, complete genome78.5478 %Subject ←→ Query19.8444
NC_007622:1751500*Staphylococcus aureus RF122, complete genome75.7598 %Subject ←→ Query20.0457
NC_008555:1204000Listeria welshimeri serovar 6b str. SLCC5334, complete genome75.4749 %Subject ←→ Query20.1406
NC_007622:2399347Staphylococcus aureus RF122, complete genome75.5147 %Subject ←→ Query20.1853
NC_014136:329484Leuconostoc kimchii IMSNU11154 chromosome, complete genome77.2978 %Subject ←→ Query20.2253
NC_005945:467427*Bacillus anthracis str. Sterne, complete genome75.4902 %Subject ←→ Query20.2395
NC_016011:1910638Listeria ivanovii subsp. ivanovii PAM 55, complete genome76.3787 %Subject ←→ Query20.272
NC_009782:1881722*Staphylococcus aureus subsp. aureus Mu3, complete genome75.2298 %Subject ←→ Query20.5543
NC_008555:696217Listeria welshimeri serovar 6b str. SLCC5334, complete genome78.4804 %Subject ←→ Query20.5557
NC_002758:1880323*Staphylococcus aureus subsp. aureus Mu50, complete genome75.2727 %Subject ←→ Query20.6165
NC_002953:1819411*Staphylococcus aureus subsp. aureus MSSA476, complete genome75.5545 %Subject ←→ Query20.6238
NC_002951:2448000Staphylococcus aureus subsp. aureus COL, complete genome75.2727 %Subject ←→ Query20.656
NC_011186:819828Vibrio fischeri MJ11 chromosome II, complete sequence75.9559 %Subject ←→ Query20.6651
NC_007530:467993Bacillus anthracis str. 'Ames Ancestor', complete genome75.5453 %Subject ←→ Query20.7107
NC_003997:467993Bacillus anthracis str. Ames, complete genome75.5453 %Subject ←→ Query20.7107
NC_016011:1419394Listeria ivanovii subsp. ivanovii PAM 55, complete genome75.7659 %Subject ←→ Query20.9326
NC_006841:750000Vibrio fischeri ES114 chromosome II, complete sequence75.3339 %Subject ←→ Query20.9889
NC_002745:1804000*Staphylococcus aureus subsp. aureus N315, complete genome75.2972 %Subject ←→ Query21.0247
NC_002951:1848684*Staphylococcus aureus subsp. aureus COL, complete genome75.4902 %Subject ←→ Query21.0554
NC_009513:1184000*Lactobacillus reuteri F275, complete genome75.6526 %Subject ←→ Query21.0877
NC_007793:1871165*Staphylococcus aureus subsp. aureus USA300, complete genome75.4902 %Subject ←→ Query21.1381
NC_010079:1871915*Staphylococcus aureus subsp. aureus USA300_TCH1516, complete75.4902 %Subject ←→ Query21.1548
NC_007795:1774725*Staphylococcus aureus subsp. aureus NCTC 8325, complete genome75.4688 %Subject ←→ Query21.2616
NC_002952:2550500Staphylococcus aureus subsp. aureus MRSA252, complete genome75.1808 %Subject ←→ Query21.3704
NC_008555:400352Listeria welshimeri serovar 6b str. SLCC5334, complete genome76.3695 %Subject ←→ Query21.4286
NC_003923:1841500*Staphylococcus aureus subsp. aureus MW2, complete genome75.8793 %Subject ←→ Query21.5484
NC_002973:72328*Listeria monocytogenes str. 4b F2365, complete genome76.1581 %Subject ←→ Query21.6136
NC_003210:870587Listeria monocytogenes EGD-e, complete genome76.9822 %Subject ←→ Query21.799
NC_003212:2413824*Listeria innocua Clip11262, complete genome76.4828 %Subject ←→ Query21.9155
NC_014925:607843Staphylococcus pseudintermedius HKU10-03 chromosome, complete77.8676 %Subject ←→ Query21.9388
NC_013891:575746Listeria seeligeri serovar 1/2b str. SLCC3954, complete genome76.8597 %Subject ←→ Query21.9659
NC_009513:870837Lactobacillus reuteri F275, complete genome76.3327 %Subject ←→ Query22.0209
NC_002952:1917999*Staphylococcus aureus subsp. aureus MRSA252, complete genome76.1581 %Subject ←→ Query22.0766
NC_013891:353625*Listeria seeligeri serovar 1/2b str. SLCC3954, complete genome76.5227 %Subject ←→ Query22.1109
NC_003210:2879906*Listeria monocytogenes EGD-e, complete genome79.4087 %Subject ←→ Query22.1972
NC_011528:767940*Coxiella burnetii CbuK_Q154, complete genome75.2237 %Subject ←→ Query22.4009
NC_015601:1463500Erysipelothrix rhusiopathiae str. Fujisawa, complete genome75.8885 %Subject ←→ Query22.4074
NC_004193:3530000Oceanobacillus iheyensis HTE831, complete genome76.3113 %Subject ←→ Query22.4875
NC_003210:2362306Listeria monocytogenes EGD-e, complete genome75.769 %Subject ←→ Query22.4951
NC_003212:57061*Listeria innocua Clip11262, complete genome77.1998 %Subject ←→ Query22.7906
NC_008525:606986Pediococcus pentosaceus ATCC 25745, complete genome75.2574 %Subject ←→ Query22.793
NC_005966:3334864Acinetobacter sp. ADP1, complete genome76.3388 %Subject ←→ Query22.8133
NC_003212:2293425Listeria innocua Clip11262, complete genome76.4124 %Subject ←→ Query22.8265
NC_003485:579946Streptococcus pyogenes MGAS8232, complete genome75.2145 %Subject ←→ Query22.9146
NC_008600:3724312*Bacillus thuringiensis str. Al Hakam, complete genome75.3431 %Subject ←→ Query23.0089
NC_008309:555680*Haemophilus somnus 129PT, complete genome77.8094 %Subject ←→ Query23.0575
NC_009727:1899876*Coxiella burnetii Dugway 7E9-12, complete genome76.3143 %Subject ←→ Query23.0605
NC_010382:1607013*Lysinibacillus sphaericus C3-41, complete genome75.6464 %Subject ←→ Query23.0849
NC_002663:1988000Pasteurella multocida subsp. multocida str. Pm70, complete genome78.3241 %Subject ←→ Query23.1153
NC_008309:1200245*Haemophilus somnus 129PT, complete genome78.3487 %Subject ←→ Query23.1639
NC_006300:1624254*Mannheimia succiniciproducens MBEL55E, complete genome78.9399 %Subject ←→ Query23.223
NC_014829:4293583Bacillus cellulosilyticus DSM 2522 chromosome, complete genome75.0306 %Subject ←→ Query23.3037
NC_015496:1288377*Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genome76.682 %Subject ←→ Query23.3828
NC_003485:1061344Streptococcus pyogenes MGAS8232, complete genome76.201 %Subject ←→ Query23.6625
NC_011527:1255998Coxiella burnetii CbuG_Q212, complete genome75.2053 %Subject ←→ Query23.804
NC_013891:640784*Listeria seeligeri serovar 1/2b str. SLCC3954, complete genome78.2384 %Subject ←→ Query23.8704
NC_008024:548165*Streptococcus pyogenes MGAS10750, complete genome75.4136 %Subject ←→ Query23.9636
NC_008525:780500Pediococcus pentosaceus ATCC 25745, complete genome75.0643 %Subject ←→ Query24.0776
NC_007622:1397407Staphylococcus aureus RF122, complete genome75.671 %Subject ←→ Query24.2484
NC_002973:461712Listeria monocytogenes str. 4b F2365, complete genome76.9148 %Subject ←→ Query24.3292
NC_011772:4875893Bacillus cereus G9842, complete genome75.1134 %Subject ←→ Query24.3602
NC_009053:313779Actinobacillus pleuropneumoniae L20, complete genome77.2825 %Subject ←→ Query24.5075
NC_006300:1140635Mannheimia succiniciproducens MBEL55E, complete genome76.6513 %Subject ←→ Query24.5104
NC_012913:772641Aggregatibacter aphrophilus NJ8700, complete genome76.0172 %Subject ←→ Query24.555
NC_004668:295417Enterococcus faecalis V583, complete genome75.4412 %Subject ←→ Query24.5805
NC_002663:62500Pasteurella multocida subsp. multocida str. Pm70, complete genome76.8352 %Subject ←→ Query24.6055
NC_014319:1613611Leuconostoc gasicomitatum LMG 18811, complete genome76.6422 %Subject ←→ Query24.79
NC_012913:2074126Aggregatibacter aphrophilus NJ8700, complete genome78.4344 %Subject ←→ Query24.9468
NC_007297:1001981Streptococcus pyogenes MGAS5005, complete genome75.2237 %Subject ←→ Query24.969
NC_008021:531730*Streptococcus pyogenes MGAS9429, complete genome75.4749 %Subject ←→ Query25.026
NC_008555:2628858*Listeria welshimeri serovar 6b str. SLCC5334, complete genome76.5257 %Subject ←→ Query25.0486
NC_008345:3199965Shewanella frigidimarina NCIMB 400, complete genome75.53 %Subject ←→ Query25.0699
NC_002663:564958Pasteurella multocida subsp. multocida str. Pm70, complete genome75.8824 %Subject ←→ Query25.0787
NC_008555:1874878*Listeria welshimeri serovar 6b str. SLCC5334, complete genome77.454 %Subject ←→ Query25.1702
NC_003212:456214Listeria innocua Clip11262, complete genome77.8768 %Subject ←→ Query25.2446
NC_004668:3053119*Enterococcus faecalis V583, complete genome75.9835 %Subject ←→ Query25.4317
NC_012913:167034Aggregatibacter aphrophilus NJ8700, complete genome76.8842 %Subject ←→ Query25.524
NC_015497:3497680Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome76.2439 %Subject ←→ Query25.5502
NC_008309:1289370Haemophilus somnus 129PT, complete genome78.3732 %Subject ←→ Query25.5826
NC_010999:349252Lactobacillus casei, complete genome75.4596 %Subject ←→ Query25.611
NC_015497:4564339Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome76.1183 %Subject ←→ Query25.6232
NC_015428:1544728*Lactobacillus buchneri NRRL B-30929 chromosome, complete genome75.288 %Subject ←→ Query25.6452
NC_015637:325561Vibrio anguillarum 775 chromosome chromosome II, complete sequence75.1471 %Subject ←→ Query25.9135
NC_012913:1867276*Aggregatibacter aphrophilus NJ8700, complete genome78.2598 %Subject ←→ Query26.1275
NC_010939:321492Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete78.2537 %Subject ←→ Query26.1819
NC_008228:2450700Pseudoalteromonas atlantica T6c, complete genome76.4216 %Subject ←→ Query26.2261
NC_015460:2403004Gallibacterium anatis UMN179 chromosome, complete genome80.7629 %Subject ←→ Query26.4804
NC_012913:280506Aggregatibacter aphrophilus NJ8700, complete genome78.6458 %Subject ←→ Query26.6691
NC_002940:1234410*Haemophilus ducreyi 35000HP, complete genome79.6722 %Subject ←→ Query26.6902
NC_004668:2938000*Enterococcus faecalis V583, complete genome75.7169 %Subject ←→ Query26.7423
NC_008309:502983*Haemophilus somnus 129PT, complete genome76.3664 %Subject ←→ Query26.8152
NC_008309:1827809Haemophilus somnus 129PT, complete genome78.0453 %Subject ←→ Query26.8389
NC_010939:1986263*Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete76.5931 %Subject ←→ Query26.8824
NC_012913:2189862*Aggregatibacter aphrophilus NJ8700, complete genome75.6955 %Subject ←→ Query27.2935
NC_008228:3679949Pseudoalteromonas atlantica T6c, complete genome75.2237 %Subject ←→ Query27.5234
NC_015554:4824000Alteromonas sp. SN2 chromosome, complete genome76.5931 %Subject ←→ Query27.5657
NC_015222:94847Nitrosomonas sp. AL212 chromosome, complete genome76.9669 %Subject ←→ Query27.6612
NC_009053:553298*Actinobacillus pleuropneumoniae L20, complete genome78.5233 %Subject ←→ Query27.7268
NC_015554:4002952Alteromonas sp. SN2 chromosome, complete genome75.4013 %Subject ←→ Query27.7481
NC_015460:2602416Gallibacterium anatis UMN179 chromosome, complete genome79.8254 %Subject ←→ Query27.9107
NC_007514:1840971*Chlorobium chlorochromatii CaD3, complete genome76.8781 %Subject ←→ Query27.9244
NC_010939:1809446*Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete79.087 %Subject ←→ Query28.1766
NC_013416:820989*Aggregatibacter actinomycetemcomitans D11S-1, complete genome75.5331 %Subject ←→ Query28.2199
NC_007795:1370500Staphylococcus aureus subsp. aureus NCTC 8325, complete genome75.2941 %Subject ←→ Query28.4553
NC_010939:405477*Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete77.932 %Subject ←→ Query28.4796
NC_012913:1832500*Aggregatibacter aphrophilus NJ8700, complete genome79.7672 %Subject ←→ Query28.5015
NC_008309:842072Haemophilus somnus 129PT, complete genome78.2138 %Subject ←→ Query28.533
NC_009053:895965Actinobacillus pleuropneumoniae L20, complete genome76.201 %Subject ←→ Query28.5832
NC_015731:2039317Nitrosomonas sp. Is79A3 chromosome, complete genome75.2604 %Subject ←→ Query28.6128
NC_010554:539122Proteus mirabilis HI4320, complete genome75.2237 %Subject ←→ Query28.6868
NC_012968:2000218*Methylotenera mobilis JLW8, complete genome77.4387 %Subject ←→ Query28.7315
NC_013895:1086500*Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete75.8793 %Subject ←→ Query28.8667
NC_008309:190550Haemophilus somnus 129PT, complete genome79.7059 %Subject ←→ Query28.8791
NC_010939:896500*Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete78.5018 %Subject ←→ Query28.8993
NC_002940:919175*Haemophilus ducreyi 35000HP, complete genome77.9442 %Subject ←→ Query28.9051
NC_015660:391627*Geobacillus thermoglucosidasius C56-YS93 chromosome, complete77.0067 %Subject ←→ Query28.9358
NC_015660:3467579*Geobacillus thermoglucosidasius C56-YS93 chromosome, complete76.4216 %Subject ←→ Query28.9622
NC_002953:1464693Staphylococcus aureus subsp. aureus MSSA476, complete genome75.3339 %Subject ←→ Query28.967
NC_009052:5089963Shewanella baltica OS155, complete genome77.6501 %Subject ←→ Query29.0126
NC_008309:385592Haemophilus somnus 129PT, complete genome78.6336 %Subject ←→ Query29.0686
NC_014655:851381Leadbetterella byssophila DSM 17132 chromosome, complete genome76.4154 %Subject ←→ Query29.2039
NC_009997:415808Shewanella baltica OS195, complete genome75.8915 %Subject ←→ Query29.2589
NC_009053:1785447*Actinobacillus pleuropneumoniae L20, complete genome78.9645 %Subject ←→ Query29.5139
NC_015497:4683741*Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome76.6728 %Subject ←→ Query29.5224
NC_013416:1783349*Aggregatibacter actinomycetemcomitans D11S-1, complete genome76.4277 %Subject ←→ Query29.6421
NC_015633:2565753*Vibrio anguillarum 775 chromosome chromosome I, complete sequence75.625 %Subject ←→ Query29.7101
NC_007514:335085*Chlorobium chlorochromatii CaD3, complete genome76.2102 %Subject ←→ Query29.799
NC_009052:4168776*Shewanella baltica OS155, complete genome76.2377 %Subject ←→ Query29.8197
NC_010999:623489Lactobacillus casei, complete genome75.5331 %Subject ←→ Query29.8391
NC_010554:1008444Proteus mirabilis HI4320, complete genome76.3695 %Subject ←→ Query29.9611
NC_009654:91096*Marinomonas sp. MWYL1, complete genome75.1501 %Subject ←→ Query30.2225
NC_009053:1081651Actinobacillus pleuropneumoniae L20, complete genome79.2249 %Subject ←→ Query30.6172
NC_015660:296488Geobacillus thermoglucosidasius C56-YS93 chromosome, complete75.3554 %Subject ←→ Query31.3239
NC_013416:1621469Aggregatibacter actinomycetemcomitans D11S-1, complete genome76.7341 %Subject ←→ Query31.4418
NC_015731:313676Nitrosomonas sp. Is79A3 chromosome, complete genome76.3787 %Subject ←→ Query31.7675
NC_008309:1851189*Haemophilus somnus 129PT, complete genome76.8137 %Subject ←→ Query31.8201
NC_011026:2533017*Chloroherpeton thalassium ATCC 35110, complete genome75.1501 %Subject ←→ Query31.9226
NC_008577:1579950Shewanella sp. ANA-3 chromosome 1, complete sequence75.0184 %Subject ←→ Query32.2252
NC_004347:4007847Shewanella oneidensis MR-1, complete genome76.155 %Subject ←→ Query32.3067
NC_011026:2450325Chloroherpeton thalassium ATCC 35110, complete genome75.5515 %Subject ←→ Query32.4678
NC_006582:4256915*Bacillus clausii KSM-K16, complete genome76.8934 %Subject ←→ Query32.4815
NC_015633:461143Vibrio anguillarum 775 chromosome chromosome I, complete sequence75.4381 %Subject ←→ Query32.6547
NC_013198:1538792*Lactobacillus rhamnosus GG, complete genome75.6219 %Subject ←→ Query33.5442
NC_006582:3949832Bacillus clausii KSM-K16, complete genome75.0582 %Subject ←→ Query33.8347
NC_003910:2588000Colwellia psychrerythraea 34H, complete genome77.2181 %Subject ←→ Query34.4966
NC_008577:2402165Shewanella sp. ANA-3 chromosome 1, complete sequence75.5699 %Subject ←→ Query34.8689