Pre_GI: OUP Neighbours

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Query: NC_006576:1551939 Synechococcus elongatus PCC 6301, complete genome

D: 46.8548

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: Freshwater organism. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.

Number of Neighbours: 32




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_011884:2397248Cyanothece sp. PCC 7425, complete genome76.9485 %Subject Query27.4015
NC_011884:1591430Cyanothece sp. PCC 7425, complete genome75.5453 %Subject Query27.6933
NC_011884:3648561*Cyanothece sp. PCC 7425, complete genome75.3278 %Subject Query27.8859
NC_007604:1183497Synechococcus elongatus PCC 7942, complete genome78.5999 %Subject Query28.0399
NC_005071:1064000*Prochlorococcus marinus str. MIT 9313, complete genome76.1336 %Subject Query29.1069
NC_006576:414696Synechococcus elongatus PCC 6301, complete genome77.9596 %Subject Query29.5841
NC_011884:2921618Cyanothece sp. PCC 7425, complete genome77.9534 %Subject Query30.5083
NC_006576:1435422Synechococcus elongatus PCC 6301, complete genome75.7904 %Subject Query31.0329
NC_008820:2422000Prochlorococcus marinus str. MIT 9303, complete genome78.5539 %Subject Query31.3534
NC_011884:2584791Cyanothece sp. PCC 7425, complete genome75.4351 %Subject Query31.6249
NC_006576:2610565*Synechococcus elongatus PCC 6301, complete genome75.0613 %Subject Query32.4351
NC_011884:1998559Cyanothece sp. PCC 7425, complete genome76.0784 %Subject Query33.0833
NC_005071:671084*Prochlorococcus marinus str. MIT 9313, complete genome77.0374 %Subject Query33.0978
NC_007604:1442500Synechococcus elongatus PCC 7942, complete genome78.0055 %Subject Query33.1617
NC_007604:1383192*Synechococcus elongatus PCC 7942, complete genome79.7488 %Subject Query33.2502
NC_005071:2180000*Prochlorococcus marinus str. MIT 9313, complete genome78.4651 %Subject Query33.4729
NC_006576:161112Synechococcus elongatus PCC 6301, complete genome79.8683 %Subject Query33.8572
NC_007604:1586243*Synechococcus elongatus PCC 7942, complete genome80.095 %Subject Query33.923
NC_006576:2683467Synechococcus elongatus PCC 6301, complete genome79.7426 %Subject Query34.6581
NC_006576:2073163Synechococcus elongatus PCC 6301, complete genome79.4853 %Subject Query35.0481
NC_007604:1875268*Synechococcus elongatus PCC 7942, complete genome75.9896 %Subject Query35.572
NC_006576:217697Synechococcus elongatus PCC 6301, complete genome78.3854 %Subject Query35.6639
NC_007604:2213659Synechococcus elongatus PCC 7942, complete genome77.8156 %Subject Query35.9302
NC_007604:1967770Synechococcus elongatus PCC 7942, complete genome75.2053 %Subject ←→ Query37.3099
NC_004113:1234048*Thermosynechococcus elongatus BP-1, complete genome75.5453 %Subject ←→ Query37.5712
NC_006576:2423250Synechococcus elongatus PCC 6301, complete genome75.8395 %Subject ←→ Query37.6034
NC_006576:2328427Synechococcus elongatus PCC 6301, complete genome75.3186 %Subject ←→ Query37.7448
NC_011884:2194767Cyanothece sp. PCC 7425, complete genome75.7322 %Subject ←→ Query38.2207
NC_007604:1145373*Synechococcus elongatus PCC 7942, complete genome79.6324 %Subject ←→ Query38.5822
NC_006576:456569*Synechococcus elongatus PCC 6301, complete genome79.2279 %Subject ←→ Query39.2636
NC_008319:635157*Synechococcus sp. CC9311, complete genome75.3033 %Subject ←→ Query40.552
NC_007604:41495Synechococcus elongatus PCC 7942, complete genome90.9191 %Subject ←→ Query44.7466