Pre_GI: OUP MCL Sub Cluster Neighbours

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Query: NC_006576:1551939 Synechococcus elongatus PCC 6301, complete genome

D: 46.8548

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: Freshwater organism. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host DescriptionProposed Island FlowSubject Island D
NC_007604:1183497Synechococcus elongatus PCC 7942, complete genomeSubject Query28.0399
NC_007604:168176Synechococcus elongatus PCC 7942, complete genomeSubject Query28.1524
NC_012660:2684981Pseudomonas fluorescens SBW25 chromosome, complete genomeSubject Query28.2792
NC_006576:414696Synechococcus elongatus PCC 6301, complete genomeSubject Query29.5841
NC_006576:1435422Synechococcus elongatus PCC 6301, complete genomeSubject Query31.0329
NC_006576:2610565*Synechococcus elongatus PCC 6301, complete genomeSubject Query32.4351
NC_007604:1442500Synechococcus elongatus PCC 7942, complete genomeSubject Query33.1617
NC_007604:1383192*Synechococcus elongatus PCC 7942, complete genomeSubject Query33.2502
NC_006576:161112Synechococcus elongatus PCC 6301, complete genomeSubject Query33.8572
NC_007604:1586243*Synechococcus elongatus PCC 7942, complete genomeSubject Query33.923
NC_006576:2683467Synechococcus elongatus PCC 6301, complete genomeSubject Query34.6581
NC_006576:2073163Synechococcus elongatus PCC 6301, complete genomeSubject Query35.0481
NC_007604:1875268*Synechococcus elongatus PCC 7942, complete genomeSubject Query35.572
NC_006576:217697Synechococcus elongatus PCC 6301, complete genomeSubject Query35.6639
NC_007604:2213659Synechococcus elongatus PCC 7942, complete genomeSubject Query35.9302
NC_006576:12230*Synechococcus elongatus PCC 6301, complete genomeSubject Query36.2947
NC_006576:1743500*Synechococcus elongatus PCC 6301, complete genomeSubject Query36.7017
NC_007604:1967770Synechococcus elongatus PCC 7942, complete genomeSubject ←→ Query37.3099
NC_006576:2423250Synechococcus elongatus PCC 6301, complete genomeSubject ←→ Query37.6034
NC_006576:2328427Synechococcus elongatus PCC 6301, complete genomeSubject ←→ Query37.7448
NC_007604:2555000*Synechococcus elongatus PCC 7942, complete genomeSubject ←→ Query37.9152
NC_009926:193821*Acaryochloris marina MBIC11017 plasmid pREB1, complete sequenceSubject ←→ Query38.1992
NC_007604:1145373*Synechococcus elongatus PCC 7942, complete genomeSubject ←→ Query38.5822
NC_006576:456569*Synechococcus elongatus PCC 6301, complete genomeSubject ←→ Query39.2636
NC_007604:41495Synechococcus elongatus PCC 7942, complete genomeSubject ←→ Query44.7466
NC_007604:743738*Synechococcus elongatus PCC 7942, complete genomeSubject ←→ Query45.8397
NC_006576:1551939*Synechococcus elongatus PCC 6301, complete genomeSubject ←→ Query46.8548