Pre_GI: OUP Neighbours

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Query: NC_006526:1472781 Zymomonas mobilis subsp. mobilis ZM4, complete genome

D: 25.8246

Host Lineage: Zymomonas mobilis; Zymomonas; Sphingomonadaceae; Sphingomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from fermenting sugarcane juice. Ethanol producer. The natural habitat of this organism includes sugar-rich plant saps where the bacterium ferments sugar to ethanol. The high conversion of sugars to ethanol makes this organism useful in industrial production systems, particularly in production of bioethanol for fuel. A recombinant strain of this bacterium is utilized for the conversion of sugars, particularly xylose, which is not utilized by another common sugar-fermenting organism such as yeast, to ethanol. Since xylose is a common breakdown product of cellulose or a waste component of the agricultural industry, it is an attractive source for ethanol production. Zymomonas mobilis was chosen for this process as it is ethanol-tolerant (up to 120 grams of ethanol per litre) and productive (5-10% more ethanol than Saccharomyces). This bacterium ferments using the Enter-Doudoroff pathway, with the result that less carbon is used in cellular biomass production and more ends up as ethanol, another factor that favors this organism for ethanol production.

Number of Neighbours: 154




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_008255:3285561Cytophaga hutchinsonii ATCC 33406, complete genome75.4688 %Subject ←→ Query21.1664
NC_009727:766000*Coxiella burnetii Dugway 7E9-12, complete genome76.2224 %Subject ←→ Query21.7504
NC_009727:1542000*Coxiella burnetii Dugway 7E9-12, complete genome75.3952 %Subject ←→ Query22.7322
NC_009727:670616Coxiella burnetii Dugway 7E9-12, complete genome75.049 %Subject ←→ Query23.2673
NC_002971:619355Coxiella burnetii RSA 493, complete genome75.0398 %Subject ←→ Query23.2807
NC_011527:1255998Coxiella burnetii CbuG_Q212, complete genome75.2819 %Subject ←→ Query23.804
NC_011528:1282691*Coxiella burnetii CbuK_Q154, complete genome75.0827 %Subject ←→ Query23.9948
NC_004193:3434015Oceanobacillus iheyensis HTE831, complete genome75.4626 %Subject ←→ Query24.3274
NC_015660:3643370Geobacillus thermoglucosidasius C56-YS93 chromosome, complete75.4044 %Subject ←→ Query25.9515
NC_009848:3582384Bacillus pumilus SAFR-032, complete genome75.4871 %Subject ←→ Query26.1899
NC_015222:983647Nitrosomonas sp. AL212 chromosome, complete genome76.3388 %Subject ←→ Query26.7844
NC_006582:2205154Bacillus clausii KSM-K16, complete genome76.1642 %Subject ←→ Query26.9729
NC_014479:3510972Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete75.1532 %Subject ←→ Query27.0094
NC_013166:194614*Kangiella koreensis DSM 16069, complete genome75.2604 %Subject ←→ Query27.042
NC_015731:1731896Nitrosomonas sp. Is79A3 chromosome, complete genome75.1899 %Subject ←→ Query27.058
NC_006582:1017000Bacillus clausii KSM-K16, complete genome75.1256 %Subject ←→ Query27.3067
NC_015731:1062824*Nitrosomonas sp. Is79A3 chromosome, complete genome76.682 %Subject ←→ Query27.365
NC_015731:2400526*Nitrosomonas sp. Is79A3 chromosome, complete genome75.9498 %Subject ←→ Query27.4684
NC_015222:94847Nitrosomonas sp. AL212 chromosome, complete genome76.5349 %Subject ←→ Query27.6612
NC_015222:1905194*Nitrosomonas sp. AL212 chromosome, complete genome75.9865 %Subject ←→ Query27.742
NC_015222:1843093Nitrosomonas sp. AL212 chromosome, complete genome76.9914 %Subject ←→ Query27.7777
NC_016023:875416Bacillus coagulans 36D1 chromosome, complete genome75.1593 %Subject ←→ Query28.0678
NC_013132:5250385*Chitinophaga pinensis DSM 2588, complete genome75.4534 %Subject ←→ Query28.1574
NC_014976:1671594Bacillus subtilis BSn5 chromosome, complete genome75.7782 %Subject ←→ Query28.2861
NC_012913:1832500*Aggregatibacter aphrophilus NJ8700, complete genome75.1134 %Subject ←→ Query28.5015
NC_015224:1440283Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.3891 %Subject ←→ Query28.5415
NC_002578:729632Thermoplasma acidophilum DSM 1728, complete genome76.2347 %Subject ←→ Query28.5587
NC_014976:2175667Bacillus subtilis BSn5 chromosome, complete genome78.2721 %Subject ←→ Query28.6114
NC_016047:2631511*Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete76.6942 %Subject ←→ Query28.7208
NC_015731:2460248*Nitrosomonas sp. Is79A3 chromosome, complete genome78.2874 %Subject ←→ Query28.8132
NC_000964:4116104Bacillus subtilis subsp. subtilis str. 168, complete genome76.5165 %Subject ←→ Query28.9123
NC_014976:403919Bacillus subtilis BSn5 chromosome, complete genome75.1624 %Subject ←→ Query28.9721
NC_015660:3518931Geobacillus thermoglucosidasius C56-YS93 chromosome, complete75.1195 %Subject ←→ Query29.0471
NC_016047:3406488Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete76.204 %Subject ←→ Query29.3318
NC_014334:37040Lactobacillus casei str. Zhang chromosome, complete genome75.3585 %Subject ←→ Query29.347
NC_014479:3245126Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete75.7169 %Subject ←→ Query29.3642
NC_014479:2038348Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete75.5147 %Subject ←→ Query29.5197
NC_014479:1831404Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete75.1409 %Subject ←→ Query29.5706
NC_016047:683368Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete77.0527 %Subject ←→ Query29.6954
NC_015731:2148517*Nitrosomonas sp. Is79A3 chromosome, complete genome77.549 %Subject ←→ Query29.7647
NC_010999:623489Lactobacillus casei, complete genome75.2482 %Subject ←→ Query29.8391
NC_015577:1170186Treponema azotonutricium ZAS-9 chromosome, complete genome75.5239 %Subject ←→ Query29.9884
NC_000964:4164683Bacillus subtilis subsp. subtilis str. 168, complete genome76.4583 %Subject ←→ Query30.1174
NC_000964:649781Bacillus subtilis subsp. subtilis str. 168, complete genome75.0521 %Subject ←→ Query30.1775
NC_008346:2370254Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete76.9945 %Subject ←→ Query30.1892
NC_014479:2505823Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete75.8578 %Subject ←→ Query30.2196
NC_014976:3469395*Bacillus subtilis BSn5 chromosome, complete genome78.22 %Subject ←→ Query30.4023
NC_014976:170683Bacillus subtilis BSn5 chromosome, complete genome76.0601 %Subject ←→ Query30.5255
NC_015731:3274739*Nitrosomonas sp. Is79A3 chromosome, complete genome75.8762 %Subject ←→ Query30.5469
NC_006322:1932847Bacillus licheniformis ATCC 14580, complete genome75.8762 %Subject ←→ Query30.5728
NC_011830:1190502*Desulfitobacterium hafniense DCB-2, complete genome76.1918 %Subject ←→ Query30.6359
NC_015221:12389Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequence77.1507 %Subject ←→ Query30.9547
NC_013132:7204082*Chitinophaga pinensis DSM 2588, complete genome75.1961 %Subject ←→ Query30.9942
NC_013132:4355363*Chitinophaga pinensis DSM 2588, complete genome75.0306 %Subject ←→ Query31.0349
NC_013198:394000*Lactobacillus rhamnosus GG, complete genome75.4381 %Subject ←→ Query31.056
NC_014376:3399366*Clostridium saccharolyticum WM1 chromosome, complete genome76.2194 %Subject ←→ Query31.1175
NC_016023:267581Bacillus coagulans 36D1 chromosome, complete genome76.0386 %Subject ←→ Query31.3655
NC_016023:1959255Bacillus coagulans 36D1 chromosome, complete genome76.4522 %Subject ←→ Query31.4721
NC_010465:660207Yersinia pseudotuberculosis YPIII, complete genome75.3952 %Subject ←→ Query31.5013
NC_012108:4971086Desulfobacterium autotrophicum HRM2, complete genome76.6513 %Subject ←→ Query31.5092
NC_011830:4951716Desulfitobacterium hafniense DCB-2, complete genome77.6164 %Subject ←→ Query31.6622
NC_016023:579000*Bacillus coagulans 36D1 chromosome, complete genome76.0018 %Subject ←→ Query31.7659
NC_015731:313676Nitrosomonas sp. Is79A3 chromosome, complete genome76.5288 %Subject ←→ Query31.7675
NC_013132:7954000*Chitinophaga pinensis DSM 2588, complete genome76.682 %Subject ←→ Query31.7994
NC_012108:2305327Desulfobacterium autotrophicum HRM2, complete genome75.3983 %Subject ←→ Query31.8496
NC_011026:3009500*Chloroherpeton thalassium ATCC 35110, complete genome75.3033 %Subject ←→ Query31.8736
NC_016023:1769925*Bacillus coagulans 36D1 chromosome, complete genome77.261 %Subject ←→ Query31.8874
NC_015731:1578106Nitrosomonas sp. Is79A3 chromosome, complete genome77.7328 %Subject ←→ Query31.8941
NC_010634:2124185*Yersinia pseudotuberculosis PB1/+, complete genome75.7108 %Subject ←→ Query31.8992
NC_006322:2173500Bacillus licheniformis ATCC 14580, complete genome75.1134 %Subject ←→ Query31.9935
NC_014551:483773*Bacillus amyloliquefaciens DSM 7, complete genome76.9669 %Subject ←→ Query32.1933
NC_014727:889132Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,76.1029 %Subject ←→ Query32.2258
NC_014479:3939183*Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete78.0637 %Subject ←→ Query32.3217
NC_016047:3599095Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete76.8995 %Subject ←→ Query32.4227
NC_014479:3452484Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete75.9283 %Subject ←→ Query32.4894
NC_015732:3145634*Spirochaeta caldaria DSM 7334 chromosome, complete genome75.1961 %Subject ←→ Query32.5055
NC_006155:2208686*Yersinia pseudotuberculosis IP 32953, complete genome75.1317 %Subject ←→ Query32.6281
NC_015709:1459838*Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, complete79.0656 %Subject ←→ Query32.7494
NC_015172:1621223Syntrophobotulus glycolicus DSM 8271 chromosome, complete genome76.0631 %Subject ←→ Query32.773
NC_016047:4108910Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete77.2917 %Subject ←→ Query32.807
NC_009725:1787262Bacillus amyloliquefaciens FZB42, complete genome75.1777 %Subject ←→ Query32.9617
NC_014976:2117567*Bacillus subtilis BSn5 chromosome, complete genome77.7114 %Subject ←→ Query33.0415
NC_012914:1923500Paenibacillus sp. JDR-2, complete genome75.5055 %Subject ←→ Query33.2254
NC_009972:606393Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome75.1869 %Subject ←→ Query33.233
NC_015172:775128*Syntrophobotulus glycolicus DSM 8271 chromosome, complete genome76.6728 %Subject ←→ Query33.5359
NC_014976:2420000Bacillus subtilis BSn5 chromosome, complete genome75.1011 %Subject ←→ Query33.5606
NC_014551:2510000*Bacillus amyloliquefaciens DSM 7, complete genome75.6403 %Subject ←→ Query33.5634
NC_015589:1439794*Desulfotomaculum ruminis DSM 2154 chromosome, complete genome75.383 %Subject ←→ Query33.7336
NC_002655:3260500*Escherichia coli O157:H7 EDL933, complete genome75.2543 %Subject ←→ Query33.8151
NC_013421:1819036Pectobacterium wasabiae WPP163, complete genome76.4001 %Subject ←→ Query34.0279
NC_016047:3632489Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete76.2469 %Subject ←→ Query34.0296
NC_015589:2049328Desulfotomaculum ruminis DSM 2154 chromosome, complete genome75.7169 %Subject ←→ Query34.2057
NC_015732:529201*Spirochaeta caldaria DSM 7334 chromosome, complete genome75.0429 %Subject ←→ Query34.248
NC_006322:3418268Bacillus licheniformis ATCC 14580, complete genome75.1256 %Subject ←→ Query34.2705
NC_016023:2163000*Bacillus coagulans 36D1 chromosome, complete genome76.9424 %Subject ←→ Query34.5001
NC_015634:2547144Bacillus coagulans 2-6 chromosome, complete genome77.2273 %Subject ←→ Query34.5737
NC_010694:1052722Erwinia tasmaniensis, complete genome75.0521 %Subject ←→ Query34.5908
NC_013198:2088780*Lactobacillus rhamnosus GG, complete genome75.9283 %Subject ←→ Query35.0489
NC_010729:619664*Porphyromonas gingivalis ATCC 33277, complete genome75.2512 %Subject ←→ Query35.2723
NC_014976:759129Bacillus subtilis BSn5 chromosome, complete genome75.9804 %Subject ←→ Query35.2757
NC_014551:3864127Bacillus amyloliquefaciens DSM 7, complete genome78.4743 %Subject ←→ Query35.3295
NC_002936:797110*Dehalococcoides ethenogenes 195, complete genome75.723 %Subject ←→ Query35.3871
NC_009725:496443*Bacillus amyloliquefaciens FZB42, complete genome75.1042 %Subject ←→ Query35.4002
NC_006322:567987*Bacillus licheniformis ATCC 14580, complete genome78.2414 %Subject Query35.8713
NC_014551:2057971Bacillus amyloliquefaciens DSM 7, complete genome77.9412 %Subject Query35.9324
NC_004547:3207776*Erwinia carotovora subsp. atroseptica SCRI1043, complete genome76.8107 %Subject Query36.2193
NC_006322:1119471Bacillus licheniformis ATCC 14580, complete genome75.9069 %Subject Query36.4447
NC_014364:667841Spirochaeta smaragdinae DSM 11293 chromosome, complete genome75.7782 %Subject Query36.4759
NC_015164:325212*Bacteroides salanitronis DSM 18170 chromosome, complete genome76.9822 %Subject Query36.6265
NC_015224:3587500Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,76.5257 %Subject Query36.7592
NC_007907:808893Desulfitobacterium hafniense Y51, complete genome75.5055 %Subject Query36.7859
NC_012691:779826*Tolumonas auensis DSM 9187, complete genome75.769 %Subject Query36.9103
NC_014010:1850500Candidatus Puniceispirillum marinum IMCC1322 chromosome, complete77.5521 %Subject Query36.9283
NC_014551:3797047Bacillus amyloliquefaciens DSM 7, complete genome75.4596 %Subject Query36.9293
NC_007907:5428247Desulfitobacterium hafniense Y51, complete genome76.3021 %Subject Query37.0349
NC_007759:1356439*Syntrophus aciditrophicus SB, complete genome75.2298 %Subject Query37.0877
NC_015634:359500*Bacillus coagulans 2-6 chromosome, complete genome75.5178 %Subject Query37.1292
NC_014170:57954Xenorhabdus nematophila ATCC 19061 plasmid XNC1_p, complete76.0386 %Subject Query37.1734
NC_015164:960525Bacteroides salanitronis DSM 18170 chromosome, complete genome75.2543 %Subject Query37.3425
NC_006322:203932*Bacillus licheniformis ATCC 14580, complete genome76.2561 %Subject Query37.4168
NC_009801:2898426*Escherichia coli E24377A, complete genome75.1501 %Subject Query37.4412
NC_014364:2246524*Spirochaeta smaragdinae DSM 11293 chromosome, complete genome76.6636 %Subject Query37.5351
NC_010159:1288000Yersinia pestis Angola, complete genome75.1042 %Subject Query37.7291
NC_007713:1Sodalis glossinidius str. 'morsitans' plasmid pSG1, complete75.2819 %Subject Query37.758
NC_014551:1279229*Bacillus amyloliquefaciens DSM 7, complete genome76.9424 %Subject Query38.31
NC_013730:2359939Spirosoma linguale DSM 74, complete genome76.2898 %Subject Query38.4788
NC_014364:815346Spirochaeta smaragdinae DSM 11293 chromosome, complete genome77.114 %Subject Query38.5007
NC_007759:2179000*Syntrophus aciditrophicus SB, complete genome75.1899 %Subject Query38.7732
NC_010634:4463727Yersinia pseudotuberculosis PB1/+, complete genome75.8885 %Subject Query38.8379
NC_014010:1020488Candidatus Puniceispirillum marinum IMCC1322 chromosome, complete77.7083 %Subject Query39.1073
NC_012691:1743038Tolumonas auensis DSM 9187, complete genome75.9835 %Subject Query39.3562
NC_014010:175500*Candidatus Puniceispirillum marinum IMCC1322 chromosome, complete75.0337 %Subject Query39.5081
NC_014364:2322269*Spirochaeta smaragdinae DSM 11293 chromosome, complete genome77.0312 %Subject Query39.7692
NC_013406:1217385Paenibacillus sp. Y412MC10 chromosome, complete genome75.1287 %Subject Query40.6606
NC_015578:2341026Treponema primitia ZAS-2 chromosome, complete genome75.7108 %Subject Query41.1981
NC_015578:247266*Treponema primitia ZAS-2 chromosome, complete genome75.5178 %Subject Query42.47
NC_011149:1987291*Salmonella enterica subsp. enterica serovar Agona str. SL483,76.4154 %Subject Query42.8458
NC_011060:2099255Pelodictyon phaeoclathratiforme BU-1, complete genome75.1869 %Subject Query43.0974
CU928160:4570498*Escherichia coli IAI1 chromosome, complete genome77.3866 %Subject Query43.1129
CU928145:3196173*Escherichia coli 55989 chromosome, complete genome75.095 %Subject Query43.1204
NC_011748:3196173*Escherichia coli 55989, complete genome75.095 %Subject Query43.1204
NC_002655:3769643*Escherichia coli O157:H7 EDL933, complete genome75.1072 %Subject Query43.1795
CP002185:3167738*Escherichia coli W, complete genome75.1011 %Subject Query43.2755
CU928160:3030324*Escherichia coli IAI1 chromosome, complete genome75.2941 %Subject Query43.3448
NC_011751:3285646*Escherichia coli UMN026 chromosome, complete genome75.3002 %Subject Query43.64
NC_002695:3702344*Escherichia coli O157:H7 str. Sakai, complete genome75.0368 %Subject Query43.9329
NC_014364:394899Spirochaeta smaragdinae DSM 11293 chromosome, complete genome75.9804 %Subject Query44.1589
NC_012917:1840172*Pectobacterium carotovorum subsp. carotovorum PC1, complete genome76.8719 %Subject Query45.0216
NC_009792:3245368Citrobacter koseri ATCC BAA-895, complete genome77.3836 %Subject Query45.1868
NC_006905:4638707*Salmonella enterica subsp. enterica serovar Choleraesuis str77.4877 %Subject Query45.4121
NC_012214:2221702*Erwinia pyrifoliae Ep1/96, complete genome75.5208 %Subject Query46.3016
NC_004631:948054*Salmonella enterica subsp. enterica serovar Typhi Ty2, complete75.3002 %Subject Query46.3441
NC_004547:1873390*Erwinia carotovora subsp. atroseptica SCRI1043, complete genome77.1538 %Subject Query46.3542
NC_015873:924392Megasphaera elsdenii DSM 20460, complete genome75.6127 %Subject Query49.076