Pre_GI: OUP Neighbours

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Query: NC_006512:952894 Idiomarina loihiensis L2TR, complete genome

D: 30.4232

Host Lineage: Idiomarina loihiensis; Idiomarina; Idiomarinaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This is the type strain for this organism, which was isolated from a hydrothermal vent at a depth of 1300 m from the Lo'ihi Seamount southeast of Hawaii. This organism grows optimally in salt concentrations of 7.5 to 10%. Genome comparison has suggested that the bacterium has maintained its amino acid transport and degradation systems but lost sugar transport and certain sugar metabolic genes suggesting that it lives on amino acids rather than sugars. This may be in keeping with the environment this organism grows in, which is at hydrothermal deep sea vents that are characterized by collections of proteinaceous particles. This organism may colonize these particles by producing exopolysaccharides.

Number of Neighbours: 3




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_006512:696000*Idiomarina loihiensis L2TR, complete genome76.4124 %Subject ←→ Query28.4273
NC_006512:1942000Idiomarina loihiensis L2TR, complete genome79.856 %Subject ←→ Query30.2347
NC_006512:2211654Idiomarina loihiensis L2TR, complete genome77.7727 %Subject ←→ Query30.8349