Pre_GI: OUP Neighbours

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Query: NC_006510:887545 Geobacillus kaustophilus HTA426, complete genome

D: 40.5733

Host Lineage: Geobacillus kaustophilus; Geobacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Geobacillus kaustophilus strain HTA426 was first isolated from deep sea sediment of the Mariana Trench in the Pacific Ocean and belongs to a closely related group of thermophilic Bacillus spp. Members of this genus were originally classified as Bacillus. Recent rDNA analysis and DNA-DNA hybridization studies using spore-forming thermophilic subsurface isolates provided enough evidence to define the phylogenetically distinct, physiologically and morphologically consistent taxon Geobacillus. Geobacillus species are chemo-organotrophic, obligately thermophilic, motile, spore-forming, aerobic or facultatively anaerobic. This organism was compared with mesophilic Bacillus spp. to identify genome characteristics and specific genes related to thermophilia. Analysis of the amino acid compositions showed clear differences between Geobacillus kaustophilus and the mesophilic bacilli. In addition, the higher G+C content in Geobacillus kaustophilus rRNA also appears correlated to thermophilia. In addition, tRNA modification by the Geobacillus kaustophilus specific tRNA methyltransferases probably aids in the thermoadaptation of this organism.

Number of Neighbours: 74




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_011567:388358*Anoxybacillus flavithermus WK1, complete genome75.7567 %Subject ←→ Query35.6127
NC_014551:691594*Bacillus amyloliquefaciens DSM 7, complete genome75.7996 %Subject ←→ Query33.1469
NC_014551:3797047Bacillus amyloliquefaciens DSM 7, complete genome75.9314 %Subject ←→ Query36.9293
NC_009725:2517428Bacillus amyloliquefaciens FZB42, complete genome75.3248 %Subject → Query29.0674
NC_009725:1159637*Bacillus amyloliquefaciens FZB42, complete genome78.4498 %Subject ←→ Query34.5848
NC_009725:692237Bacillus amyloliquefaciens FZB42, complete genome75.1501 %Subject ←→ Query37.5873
NC_009725:3878862Bacillus amyloliquefaciens FZB42, complete genome75.6924 %Subject ←→ Query36.2792
NC_006582:1297039Bacillus clausii KSM-K16, complete genome75.5515 %Subject ←→ Query31.8931
NC_015634:2779392Bacillus coagulans 2-6 chromosome, complete genome75.3646 %Subject ←→ Query32.7639
NC_015634:2694706*Bacillus coagulans 2-6 chromosome, complete genome76.7004 %Subject ←→ Query35.6668
NC_015634:2595500Bacillus coagulans 2-6 chromosome, complete genome76.4767 %Subject ←→ Query35.9909
NC_015634:2547144Bacillus coagulans 2-6 chromosome, complete genome76.6851 %Subject ←→ Query34.5737
NC_015634:2492771Bacillus coagulans 2-6 chromosome, complete genome75.2819 %Subject ←→ Query38.165
NC_015634:959396Bacillus coagulans 2-6 chromosome, complete genome75.5699 %Subject ←→ Query35.0988
NC_015634:3017564*Bacillus coagulans 2-6 chromosome, complete genome75.0888 %Subject ←→ Query35.8382
NC_016023:729843Bacillus coagulans 36D1 chromosome, complete genome76.4828 %Subject → Query27.5069
NC_016023:267581Bacillus coagulans 36D1 chromosome, complete genome76.2776 %Subject ←→ Query31.3655
NC_016023:2265000Bacillus coagulans 36D1 chromosome, complete genome76.6789 %Subject ←→ Query33.3949
NC_016023:1959255Bacillus coagulans 36D1 chromosome, complete genome76.1887 %Subject ←→ Query31.4721
NC_016023:1143130*Bacillus coagulans 36D1 chromosome, complete genome75.4473 %Subject → Query28.1872
NC_006322:1959918Bacillus licheniformis ATCC 14580, complete genome78.2108 %Subject → Query29.4747
NC_006322:2851215Bacillus licheniformis ATCC 14580, complete genome75.3064 %Subject ←→ Query32.3051
NC_006322:1932847Bacillus licheniformis ATCC 14580, complete genome78.0515 %Subject → Query30.5728
NC_006322:2658587Bacillus licheniformis ATCC 14580, complete genome77.451 %Subject ←→ Query32.5167
NC_006322:741516Bacillus licheniformis ATCC 14580, complete genome79.4056 %Subject ←→ Query34.6233
NC_006322:1536426Bacillus licheniformis ATCC 14580, complete genome78.2322 %Subject ←→ Query31.0007
NC_006322:2592176*Bacillus licheniformis ATCC 14580, complete genome76.0018 %Subject ←→ Query34.1844
NC_006322:717953*Bacillus licheniformis ATCC 14580, complete genome76.633 %Subject ←→ Query31.5251
NC_006322:1415863Bacillus licheniformis ATCC 14580, complete genome77.3376 %Subject ←→ Query30.8571
NC_006322:2173500Bacillus licheniformis ATCC 14580, complete genome75.3033 %Subject ←→ Query31.9935
NC_006322:567987*Bacillus licheniformis ATCC 14580, complete genome80.1899 %Subject ←→ Query35.8713
NC_006322:1119471Bacillus licheniformis ATCC 14580, complete genome76.3235 %Subject ←→ Query36.4447
NC_006322:203932*Bacillus licheniformis ATCC 14580, complete genome79.7672 %Subject ←→ Query37.4168
NC_006322:3418268Bacillus licheniformis ATCC 14580, complete genome75.0153 %Subject ←→ Query34.2705
NC_006322:1994000Bacillus licheniformis ATCC 14580, complete genome80.4167 %Subject ←→ Query34.2412
NC_006322:3198829Bacillus licheniformis ATCC 14580, complete genome75.8211 %Subject → Query28.8607
NC_014219:3188128*Bacillus selenitireducens MLS10 chromosome, complete genome75.7874 %Subject ←→ Query32.2126
NC_014479:3079855Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete75.9681 %Subject → Query26.4835
NC_011026:1181940Chloroherpeton thalassium ATCC 35110, complete genome77.5888 %Subject → Query24.8017
NC_013895:605488*Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete75.1256 %Subject ←→ Query32.8408
NC_009727:1177390Coxiella burnetii Dugway 7E9-12, complete genome75.1532 %Subject → Query23.0788
NC_010556:1292232*Exiguobacterium sibiricum 255-15, complete genome75.0306 %Subject → Query29.2
NC_006510:2910000Geobacillus kaustophilus HTA426, complete genome81.5656 %Subject ←→ Query30.9906
NC_006510:591339Geobacillus kaustophilus HTA426, complete genome83.7592 %Subject ←→ Query42.2291
NC_006510:3321426Geobacillus kaustophilus HTA426, complete genome84.5374 %Subject ←→ Query36.1711
NC_006510:3133965*Geobacillus kaustophilus HTA426, complete genome78.6795 %Subject ←→ Query43.1524
NC_012793:383612*Geobacillus sp. WCH70, complete genome82.9381 %Subject → Query28.1218
NC_012793:3275751*Geobacillus sp. WCH70, complete genome77.3897 %Subject → Query28.4508
NC_012793:3096095Geobacillus sp. WCH70, complete genome76.1765 %Subject → Query29.7031
NC_014916:22644Geobacillus sp. Y412MC52 plasmid pGYMC5201, complete sequence76.8382 %Subject → Query26.9425
NC_013412:33834Geobacillus sp. Y412MC61 plasmid pGYMC6101, complete sequence79.5221 %Subject → Query26.9638
NC_013411:3251500Geobacillus sp. Y412MC61, complete genome79.1176 %Subject → Query26.0153
NC_015660:2685842Geobacillus thermoglucosidasius C56-YS93 chromosome, complete78.0913 %Subject → Query28.0392
NC_015660:739040Geobacillus thermoglucosidasius C56-YS93 chromosome, complete75.1501 %Subject → Query27.5538
NC_015660:1988000Geobacillus thermoglucosidasius C56-YS93 chromosome, complete78.1403 %Subject → Query28.8303
NC_015660:487506Geobacillus thermoglucosidasius C56-YS93 chromosome, complete77.7145 %Subject → Query27.583
NC_015660:1896904Geobacillus thermoglucosidasius C56-YS93 chromosome, complete78.3548 %Subject → Query27.3869
NC_015660:391627*Geobacillus thermoglucosidasius C56-YS93 chromosome, complete75.2696 %Subject → Query28.9358
NC_015660:1076159Geobacillus thermoglucosidasius C56-YS93 chromosome, complete79.9295 %Subject → Query27.3103
NC_015660:3643370Geobacillus thermoglucosidasius C56-YS93 chromosome, complete77.9381 %Subject → Query25.9515
NC_015660:3518931Geobacillus thermoglucosidasius C56-YS93 chromosome, complete76.6881 %Subject → Query29.0471
NC_015660:3467579*Geobacillus thermoglucosidasius C56-YS93 chromosome, complete76.4124 %Subject → Query28.9622
NC_015160:4285542*Odoribacter splanchnicus DSM 20712 chromosome, complete genome78.0515 %Subject ←→ Query35.4063
NC_015690:1109335Paenibacillus mucilaginosus KNP414 chromosome, complete genome76.8444 %Subject ←→ Query46.8461
NC_012914:5194791Paenibacillus sp. JDR-2, complete genome78.2047 %Subject ←→ Query33.2273
NC_012914:3315947Paenibacillus sp. JDR-2, complete genome79.8805 %Subject ←→ Query31.6513
NC_012914:1923500Paenibacillus sp. JDR-2, complete genome76.5502 %Subject ←→ Query33.2254
NC_013406:1707570Paenibacillus sp. Y412MC10 chromosome, complete genome76.4246 %Subject ←→ Query33.384
NC_013406:5066769*Paenibacillus sp. Y412MC10 chromosome, complete genome77.3652 %Subject ←→ Query36.0422
NC_013406:3672857Paenibacillus sp. Y412MC10 chromosome, complete genome76.1795 %Subject ←→ Query39.5404
NC_013406:3521489Paenibacillus sp. Y412MC10 chromosome, complete genome78.4528 %Subject ←→ Query45.1818
NC_013406:303218*Paenibacillus sp. Y412MC10 chromosome, complete genome77.8768 %Subject ←→ Query43.5239
NC_014762:2428721*Sulfuricurvum kujiense DSM 16994 chromosome, complete genome75.1532 %Subject → Query28.964
NC_007759:2179000*Syntrophus aciditrophicus SB, complete genome76.0907 %Subject ←→ Query38.7732