Pre_GI: OUP Neighbours

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Query: NC_006510:795973 Geobacillus kaustophilus HTA426, complete genome

D: 30.7393

Host Lineage: Geobacillus kaustophilus; Geobacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Geobacillus kaustophilus strain HTA426 was first isolated from deep sea sediment of the Mariana Trench in the Pacific Ocean and belongs to a closely related group of thermophilic Bacillus spp. Members of this genus were originally classified as Bacillus. Recent rDNA analysis and DNA-DNA hybridization studies using spore-forming thermophilic subsurface isolates provided enough evidence to define the phylogenetically distinct, physiologically and morphologically consistent taxon Geobacillus. Geobacillus species are chemo-organotrophic, obligately thermophilic, motile, spore-forming, aerobic or facultatively anaerobic. This organism was compared with mesophilic Bacillus spp. to identify genome characteristics and specific genes related to thermophilia. Analysis of the amino acid compositions showed clear differences between Geobacillus kaustophilus and the mesophilic bacilli. In addition, the higher G+C content in Geobacillus kaustophilus rRNA also appears correlated to thermophilia. In addition, tRNA modification by the Geobacillus kaustophilus specific tRNA methyltransferases probably aids in the thermoadaptation of this organism.

Number of Neighbours: 42




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_013411:2951559Geobacillus sp. Y412MC61, complete genome75.7812 %Subject ←→ Query26.0731
NC_013411:2739989Geobacillus sp. Y412MC61, complete genome78.1495 %Subject ←→ Query28.6055
NC_014915:1331459*Geobacillus sp. Y412MC52 chromosome, complete genome81.9455 %Subject ←→ Query29.3197
NC_013411:1587689*Geobacillus sp. Y412MC61, complete genome75.579 %Subject ←→ Query29.6612
NC_013411:2191514*Geobacillus sp. Y412MC61, complete genome81.9914 %Subject ←→ Query29.8119
NC_006510:1901954Geobacillus kaustophilus HTA426, complete genome81.1244 %Subject ←→ Query30.262
NC_014915:308056*Geobacillus sp. Y412MC52 chromosome, complete genome77.3866 %Subject ←→ Query30.3414
NC_006510:1921541Geobacillus kaustophilus HTA426, complete genome78.5417 %Subject ←→ Query30.4934
NC_013411:681907Geobacillus sp. Y412MC61, complete genome79.9602 %Subject ←→ Query30.5897
NC_013411:1168049*Geobacillus sp. Y412MC61, complete genome77.3866 %Subject ←→ Query30.6232
NC_014915:1880748Geobacillus sp. Y412MC52 chromosome, complete genome77.788 %Subject ←→ Query30.9399
NC_006510:1995916Geobacillus kaustophilus HTA426, complete genome78.2077 %Subject ←→ Query31.0693
NC_006510:1501487Geobacillus kaustophilus HTA426, complete genome77.9197 %Subject ←→ Query31.1681
NC_013411:334549Geobacillus sp. Y412MC61, complete genome84.8438 %Subject ←→ Query31.2318
NC_006510:2778777Geobacillus kaustophilus HTA426, complete genome78.796 %Subject ←→ Query31.9066
NC_013411:2767400Geobacillus sp. Y412MC61, complete genome80.1164 %Subject ←→ Query32.8925
NC_014915:2387639Geobacillus sp. Y412MC52 chromosome, complete genome83.8971 %Subject ←→ Query32.928
NC_006510:372826*Geobacillus kaustophilus HTA426, complete genome78.4283 %Subject ←→ Query33.0492
NC_012793:3243727Geobacillus sp. WCH70, complete genome78.606 %Subject ←→ Query33.5494
NC_014915:2092678Geobacillus sp. Y412MC52 chromosome, complete genome78.3241 %Subject ←→ Query33.7161
NC_014915:1376035Geobacillus sp. Y412MC52 chromosome, complete genome79.9939 %Subject ←→ Query33.9451
NC_013411:735838Geobacillus sp. Y412MC61, complete genome79.4669 %Subject ←→ Query34.1271
NC_013406:6052913Paenibacillus sp. Y412MC10 chromosome, complete genome75.3431 %Subject ←→ Query34.4844
NC_014915:2900209Geobacillus sp. Y412MC52 chromosome, complete genome80.4626 %Subject ←→ Query34.6121
NC_006510:1446490Geobacillus kaustophilus HTA426, complete genome80.1593 %Subject ←→ Query34.7114
NC_014915:1080793Geobacillus sp. Y412MC52 chromosome, complete genome80.1471 %Subject ←→ Query34.7963
NC_013411:2236166Geobacillus sp. Y412MC61, complete genome80.0643 %Subject ←→ Query34.9976
NC_014915:332784Geobacillus sp. Y412MC52 chromosome, complete genome79.3536 %Subject ←→ Query35.3478
NC_013411:1941762Geobacillus sp. Y412MC61, complete genome78.9032 %Subject ←→ Query35.4059
NC_013411:2975364Geobacillus sp. Y412MC61, complete genome79.9663 %Subject ←→ Query35.9085
NC_014915:1909275Geobacillus sp. Y412MC52 chromosome, complete genome79.277 %Subject ←→ Query36.0595
NC_014915:2963500Geobacillus sp. Y412MC52 chromosome, complete genome75.9252 %Subject ←→ Query36.3336
NC_014915:3259440Geobacillus sp. Y412MC52 chromosome, complete genome80.6189 %Subject ←→ Query36.3561
NC_006510:2044347Geobacillus kaustophilus HTA426, complete genome76.6207 %Subject ←→ Query36.7248
NC_013411:284461Geobacillus sp. Y412MC61, complete genome77.5306 %Subject ←→ Query36.9212
NC_006510:310212*Geobacillus kaustophilus HTA426, complete genome77.8431 %Subject ←→ Query37.0244
NC_013411:3201331*Geobacillus sp. Y412MC61, complete genome80.4841 %Subject ←→ Query37.0683
NC_002570:2649759*Bacillus halodurans C-125, complete genome76.5533 %Subject ←→ Query37.3257
NC_014915:3207300*Geobacillus sp. Y412MC52 chromosome, complete genome80.4841 %Subject ←→ Query37.427
NC_014915:2427000Geobacillus sp. Y412MC52 chromosome, complete genome79.0748 %Subject ←→ Query38.0805
NC_006510:1400000*Geobacillus kaustophilus HTA426, complete genome77.1599 %Subject ←→ Query38.8011
NC_006510:1014500*Geobacillus kaustophilus HTA426, complete genome80.1777 %Subject ←→ Query39.7198