Pre_GI: OUP Neighbours

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Query: NC_006510:2778777 Geobacillus kaustophilus HTA426, complete genome

D: 31.9066

Host Lineage: Geobacillus kaustophilus; Geobacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Geobacillus kaustophilus strain HTA426 was first isolated from deep sea sediment of the Mariana Trench in the Pacific Ocean and belongs to a closely related group of thermophilic Bacillus spp. Members of this genus were originally classified as Bacillus. Recent rDNA analysis and DNA-DNA hybridization studies using spore-forming thermophilic subsurface isolates provided enough evidence to define the phylogenetically distinct, physiologically and morphologically consistent taxon Geobacillus. Geobacillus species are chemo-organotrophic, obligately thermophilic, motile, spore-forming, aerobic or facultatively anaerobic. This organism was compared with mesophilic Bacillus spp. to identify genome characteristics and specific genes related to thermophilia. Analysis of the amino acid compositions showed clear differences between Geobacillus kaustophilus and the mesophilic bacilli. In addition, the higher G+C content in Geobacillus kaustophilus rRNA also appears correlated to thermophilia. In addition, tRNA modification by the Geobacillus kaustophilus specific tRNA methyltransferases probably aids in the thermoadaptation of this organism.

Number of Neighbours: 98




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_013411:735838Geobacillus sp. Y412MC61, complete genome92.4479 %Subject ←→ Query34.1271
NC_014915:2847680Geobacillus sp. Y412MC52 chromosome, complete genome91.5227 %Subject ←→ Query33.7346
NC_013411:2975364Geobacillus sp. Y412MC61, complete genome87.0711 %Subject ←→ Query35.9085
NC_014915:2092678Geobacillus sp. Y412MC52 chromosome, complete genome86.348 %Subject ←→ Query33.7161
NC_014915:2149884*Geobacillus sp. Y412MC52 chromosome, complete genome86.2898 %Subject ←→ Query29.6085
NC_013411:1168049*Geobacillus sp. Y412MC61, complete genome86.1213 %Subject ←→ Query30.6232
NC_014915:308056*Geobacillus sp. Y412MC52 chromosome, complete genome86.1213 %Subject ←→ Query30.3414
NC_006510:310212*Geobacillus kaustophilus HTA426, complete genome86.0815 %Subject ←→ Query37.0244
NC_013411:3010000*Geobacillus sp. Y412MC61, complete genome86.0172 %Subject ←→ Query28.3439
NC_014915:3320768Geobacillus sp. Y412MC52 chromosome, complete genome86.0018 %Subject ←→ Query34.5414
NC_013411:3314799Geobacillus sp. Y412MC61, complete genome85.7782 %Subject ←→ Query34.0151
NC_014915:1376035Geobacillus sp. Y412MC52 chromosome, complete genome85.671 %Subject ←→ Query33.9451
NC_013411:2236166Geobacillus sp. Y412MC61, complete genome85.3615 %Subject ←→ Query34.9976
NC_006510:1501487Geobacillus kaustophilus HTA426, complete genome85.3186 %Subject ←→ Query31.1681
NC_014915:3259440Geobacillus sp. Y412MC52 chromosome, complete genome85.1624 %Subject ←→ Query36.3561
NC_012793:3243727Geobacillus sp. WCH70, complete genome85.1471 %Subject ←→ Query33.5494
NC_006510:1446490Geobacillus kaustophilus HTA426, complete genome84.9786 %Subject ←→ Query34.7114
NC_014915:2427000Geobacillus sp. Y412MC52 chromosome, complete genome84.9295 %Subject ←→ Query38.0805
NC_013411:2191514*Geobacillus sp. Y412MC61, complete genome84.7396 %Subject ←→ Query29.8119
NC_014915:1331459*Geobacillus sp. Y412MC52 chromosome, complete genome84.7243 %Subject ←→ Query29.3197
NC_013411:1941762Geobacillus sp. Y412MC61, complete genome84.7151 %Subject ←→ Query35.4059
NC_006510:1901954Geobacillus kaustophilus HTA426, complete genome84.5282 %Subject ←→ Query30.262
NC_013411:1587689*Geobacillus sp. Y412MC61, complete genome83.9767 %Subject ←→ Query29.6612
NC_014915:1080793Geobacillus sp. Y412MC52 chromosome, complete genome83.9308 %Subject ←→ Query34.7963
NC_014915:1909275Geobacillus sp. Y412MC52 chromosome, complete genome83.5754 %Subject ←→ Query36.0595
NC_006510:2044347Geobacillus kaustophilus HTA426, complete genome83.4375 %Subject ←→ Query36.7248
NC_013411:2739989Geobacillus sp. Y412MC61, complete genome83.4344 %Subject ←→ Query28.6055
NC_013411:681907Geobacillus sp. Y412MC61, complete genome83.2659 %Subject ←→ Query30.5897
NC_013411:284461Geobacillus sp. Y412MC61, complete genome83.0178 %Subject ←→ Query36.9212
NC_006510:372826*Geobacillus kaustophilus HTA426, complete genome82.9841 %Subject ←→ Query33.0492
NC_013411:2767400Geobacillus sp. Y412MC61, complete genome82.9259 %Subject ←→ Query32.8925
NC_006510:1995916Geobacillus kaustophilus HTA426, complete genome82.7451 %Subject ←→ Query31.0693
NC_014915:727631*Geobacillus sp. Y412MC52 chromosome, complete genome82.742 %Subject ←→ Query27.4562
NC_013411:3201331*Geobacillus sp. Y412MC61, complete genome82.7298 %Subject ←→ Query37.0683
NC_014915:3207300*Geobacillus sp. Y412MC52 chromosome, complete genome82.7298 %Subject ←→ Query37.427
NC_014915:2900209Geobacillus sp. Y412MC52 chromosome, complete genome82.6961 %Subject ←→ Query34.6121
NC_014915:1880748Geobacillus sp. Y412MC52 chromosome, complete genome82.4847 %Subject ←→ Query30.9399
NC_006510:2110430Geobacillus kaustophilus HTA426, complete genome82.3254 %Subject ←→ Query29.4869
NC_014915:332784Geobacillus sp. Y412MC52 chromosome, complete genome82.2672 %Subject ←→ Query35.3478
NC_012793:2337776Geobacillus sp. WCH70, complete genome82.1875 %Subject ←→ Query30.1556
NC_006510:1921541Geobacillus kaustophilus HTA426, complete genome82.0803 %Subject ←→ Query30.4934
NC_006510:1731939*Geobacillus kaustophilus HTA426, complete genome82.0006 %Subject ←→ Query41.4725
NC_013411:2951559Geobacillus sp. Y412MC61, complete genome81.7647 %Subject ←→ Query26.0731
NC_006510:1014500*Geobacillus kaustophilus HTA426, complete genome81.5962 %Subject ←→ Query39.7198
NC_013411:1454465Geobacillus sp. Y412MC61, complete genome81.5227 %Subject ←→ Query39.8118
NC_006510:1400000*Geobacillus kaustophilus HTA426, complete genome81.1152 %Subject ←→ Query38.8011
NC_014915:2387639Geobacillus sp. Y412MC52 chromosome, complete genome80.7567 %Subject ←→ Query32.928
NC_013411:334549Geobacillus sp. Y412MC61, complete genome80.6679 %Subject ←→ Query31.2318
NC_014915:2963500Geobacillus sp. Y412MC52 chromosome, complete genome80.6464 %Subject ←→ Query36.3336
NC_014915:595569Geobacillus sp. Y412MC52 chromosome, complete genome80.5208 %Subject ←→ Query41.0221
NC_006510:746814Geobacillus kaustophilus HTA426, complete genome80.1869 %Subject ←→ Query29.7149
NC_006510:795973Geobacillus kaustophilus HTA426, complete genome78.796 %Subject ←→ Query30.7393
NC_006322:2886404*Bacillus licheniformis ATCC 14580, complete genome78.7898 %Subject ←→ Query31.3686
NC_015437:697051*Selenomonas sputigena ATCC 35185 chromosome, complete genome78.75 %Subject ←→ Query41.6465
NC_013411:597235Geobacillus sp. Y412MC61, complete genome78.2996 %Subject ←→ Query35.813
NC_006322:4048990Bacillus licheniformis ATCC 14580, complete genome77.7083 %Subject ←→ Query32.0525
NC_009667:1203861*Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence77.693 %Subject ←→ Query36.751
NC_010803:634497*Chlorobium limicola DSM 245, complete genome77.4969 %Subject ←→ Query35.9689
NC_009668:594500*Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequence77.4877 %Subject ←→ Query37.0794
NC_015690:3477573*Paenibacillus mucilaginosus KNP414 chromosome, complete genome77.3621 %Subject ←→ Query39.2613
NC_013406:347995Paenibacillus sp. Y412MC10 chromosome, complete genome77.2978 %Subject ←→ Query34.3654
NC_015690:4361000Paenibacillus mucilaginosus KNP414 chromosome, complete genome77.1752 %Subject ←→ Query40.7943
NC_013406:3975512*Paenibacillus sp. Y412MC10 chromosome, complete genome77.1262 %Subject ←→ Query34.1926
NC_013406:3400114Paenibacillus sp. Y412MC10 chromosome, complete genome77.0711 %Subject ←→ Query41.0068
NC_003308:1Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence76.9485 %Subject ← Query43.6752
NC_013406:4000518Paenibacillus sp. Y412MC10 chromosome, complete genome76.9026 %Subject ←→ Query31.2804
NC_015975:1936504*Lactobacillus ruminis ATCC 27782 chromosome, complete genome76.8474 %Subject ←→ Query33.1165
NC_013406:5954472Paenibacillus sp. Y412MC10 chromosome, complete genome76.8229 %Subject ←→ Query37.4529
NC_010581:2999002Beijerinckia indica subsp. indica ATCC 9039, complete genome76.7402 %Subject ←→ Query40.2786
NC_014976:2981777Bacillus subtilis BSn5 chromosome, complete genome76.7402 %Subject ←→ Query33.6272
NC_010337:803748Heliobacterium modesticaldum Ice1, complete genome76.6759 %Subject ← Query48.9344
NC_013406:3650300Paenibacillus sp. Y412MC10 chromosome, complete genome76.6605 %Subject ←→ Query34.0613
NC_016047:876875Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete76.6054 %Subject ←→ Query33.5371
NC_002570:2649759*Bacillus halodurans C-125, complete genome76.5809 %Subject ←→ Query37.3257
NC_015437:1066014Selenomonas sputigena ATCC 35185 chromosome, complete genome76.5288 %Subject ←→ Query34.0116
NC_013406:4023367Paenibacillus sp. Y412MC10 chromosome, complete genome76.4461 %Subject ←→ Query29.6966
NC_006932:531000*Brucella abortus biovar 1 str. 9-941 chromosome I, complete76.2071 %Subject ←→ Query29.548
NC_016023:1725294*Bacillus coagulans 36D1 chromosome, complete genome76.0846 %Subject ←→ Query32.4295
NC_013406:2207520*Paenibacillus sp. Y412MC10 chromosome, complete genome76.0692 %Subject ←→ Query31.481
NC_013406:3874157Paenibacillus sp. Y412MC10 chromosome, complete genome76.057 %Subject ←→ Query34.0467
NC_009668:1726000*Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequence76.0263 %Subject ←→ Query29.1668
NC_009667:1371924*Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence75.9681 %Subject ← Query42.1148
NC_010169:527500*Brucella suis ATCC 23445 chromosome I, complete sequence75.9007 %Subject ←→ Query29.591
NC_012796:1600600Desulfovibrio magneticus RS-1, complete genome75.8548 %Subject ← Query48.3172
NC_002932:1798869*Chlorobium tepidum TLS, complete genome75.6526 %Subject ← Query50.6144
NC_012914:4238142Paenibacillus sp. JDR-2, complete genome75.4534 %Subject ←→ Query35.0494
NC_013406:1145268Paenibacillus sp. Y412MC10 chromosome, complete genome75.4473 %Subject ←→ Query38.0715
NC_015437:438538Selenomonas sputigena ATCC 35185 chromosome, complete genome75.3676 %Subject ←→ Query35.0985
NC_010742:529500*Brucella abortus S19 chromosome 1, complete sequence75.3064 %Subject ←→ Query29.5732
NC_004310:508483*Brucella suis 1330 chromosome I, complete sequence75.2911 %Subject ←→ Query29.7635
NC_000964:764118Bacillus subtilis subsp. subtilis str. 168, complete genome75.2298 %Subject ←→ Query37.0775
NC_007618:526400Brucella melitensis biovar Abortus 2308 chromosome I, complete75.2114 %Subject ←→ Query29.4739
NC_015572:3091707*Methylomonas methanica MC09 chromosome, complete genome75.1838 %Subject ←→ Query32.4266
NC_010103:507482*Brucella canis ATCC 23365 chromosome I, complete sequence75.1562 %Subject ←→ Query28.9388
NC_010337:1561430Heliobacterium modesticaldum Ice1, complete genome75.1409 %Subject ←→ Query41.1505
NC_016023:1538000*Bacillus coagulans 36D1 chromosome, complete genome75.0888 %Subject ←→ Query27.6447
NC_013406:3926531Paenibacillus sp. Y412MC10 chromosome, complete genome75.0705 %Subject ←→ Query33.6637
NC_012982:711122*Hirschia baltica ATCC 49814, complete genome75.0521 %Subject ←→ Query36.0979