Pre_GI: OUP Neighbours

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Query: NC_006347:4031000 Bacteroides fragilis YCH46, complete genome

D: 36.4055

Host Lineage: Bacteroides fragilis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism can become an opportunistic pathogen, infecting anywhere in the body and causing abcess formation. Enterotoxigenic Bacterioides fragilis (ETBF) is associated with diarrheal diseases. This strain was isolated from a patient with septicemia in Japan. Common gut bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Although only a minor component of the human gut microflora, this organism is a major component of clinical specimens and is the most common anaerobe isolated.

Number of Neighbours: 76




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_004663:2014035Bacteroides thetaiotaomicron VPI-5482, complete genome75.8027 %Subject ←→ Query31.5459
NC_003228:3645426*Bacteroides fragilis NCTC 9343, complete genome77.0987 %Subject ←→ Query31.9249
NC_004663:1499145Bacteroides thetaiotaomicron VPI-5482, complete genome78.8205 %Subject ←→ Query31.931
NC_004663:4928333Bacteroides thetaiotaomicron VPI-5482, complete genome75.625 %Subject ←→ Query32.1072
NC_004663:3680974*Bacteroides thetaiotaomicron VPI-5482, complete genome78.0607 %Subject ←→ Query32.1857
NC_004663:2246756Bacteroides thetaiotaomicron VPI-5482, complete genome78.1311 %Subject ←→ Query32.9199
NC_003228:3085793Bacteroides fragilis NCTC 9343, complete genome85.4718 %Subject ←→ Query33.1928
NC_003228:2929006*Bacteroides fragilis NCTC 9343, complete genome83.3701 %Subject ←→ Query33.2448
NC_006347:3735887*Bacteroides fragilis YCH46, complete genome80.242 %Subject ←→ Query33.3293
NC_004663:3801071*Bacteroides thetaiotaomicron VPI-5482, complete genome76.9424 %Subject ←→ Query33.3568
NC_004663:4692339Bacteroides thetaiotaomicron VPI-5482, complete genome80.1226 %Subject ←→ Query33.5299
NC_006347:5094763Bacteroides fragilis YCH46, complete genome77.3162 %Subject ←→ Query33.6485
NC_006347:2327018*Bacteroides fragilis YCH46, complete genome78.076 %Subject ←→ Query33.6545
NC_003228:4449072*Bacteroides fragilis NCTC 9343, complete genome79.9969 %Subject ←→ Query33.6657
NC_003228:2437288Bacteroides fragilis NCTC 9343, complete genome82.2947 %Subject ←→ Query33.6998
NC_003228:5027668Bacteroides fragilis NCTC 9343, complete genome77.546 %Subject ←→ Query33.7164
NC_003228:648669Bacteroides fragilis NCTC 9343, complete genome82.8768 %Subject ←→ Query33.9092
NC_006347:3843228Bacteroides fragilis YCH46, complete genome78.606 %Subject ←→ Query34.0011
NC_003228:3934770Bacteroides fragilis NCTC 9343, complete genome95.2237 %Subject ←→ Query34.0254
NC_004663:3143198*Bacteroides thetaiotaomicron VPI-5482, complete genome79.2524 %Subject ←→ Query34.03
NC_004663:1365429Bacteroides thetaiotaomicron VPI-5482, complete genome76.7616 %Subject ←→ Query34.0528
NC_003228:1045207Bacteroides fragilis NCTC 9343, complete genome76.1029 %Subject ←→ Query34.1926
NC_003228:1832838Bacteroides fragilis NCTC 9343, complete genome79.2402 %Subject ←→ Query34.2838
NC_014933:1431012Bacteroides helcogenes P 36-108 chromosome, complete genome77.7298 %Subject ←→ Query34.3036
NC_003228:3545811*Bacteroides fragilis NCTC 9343, complete genome80.0306 %Subject ←→ Query34.3081
NC_004663:5194400*Bacteroides thetaiotaomicron VPI-5482, complete genome77.8248 %Subject ←→ Query34.3162
NC_003228:4895326*Bacteroides fragilis NCTC 9343, complete genome75.5515 %Subject ←→ Query34.3416
NC_006347:3638165*Bacteroides fragilis YCH46, complete genome80.2328 %Subject ←→ Query34.3628
NC_003228:3143470Bacteroides fragilis NCTC 9343, complete genome80.9589 %Subject ←→ Query34.4658
NC_004663:1983439*Bacteroides thetaiotaomicron VPI-5482, complete genome79.473 %Subject ←→ Query34.4915
NC_006347:4961865*Bacteroides fragilis YCH46, complete genome75.7812 %Subject ←→ Query34.6252
NC_003228:1870953Bacteroides fragilis NCTC 9343, complete genome81.4737 %Subject ←→ Query34.679
NC_006347:700838Bacteroides fragilis YCH46, complete genome82.3376 %Subject ←→ Query34.7354
NC_004663:2184204Bacteroides thetaiotaomicron VPI-5482, complete genome77.0619 %Subject ←→ Query34.7763
NC_004663:5099845*Bacteroides thetaiotaomicron VPI-5482, complete genome81.6146 %Subject ←→ Query34.9374
NC_006347:1815687Bacteroides fragilis YCH46, complete genome76.5748 %Subject ←→ Query34.9951
NC_014933:1759729Bacteroides helcogenes P 36-108 chromosome, complete genome76.3082 %Subject ←→ Query35.7243
NC_004663:5437794Bacteroides thetaiotaomicron VPI-5482, complete genome77.8768 %Subject ←→ Query35.9321
NC_004663:163152Bacteroides thetaiotaomicron VPI-5482, complete genome76.0876 %Subject ←→ Query36.0424
NC_006347:2861498Bacteroides fragilis YCH46, complete genome82.5613 %Subject ←→ Query36.0469
NC_014933:1023486*Bacteroides helcogenes P 36-108 chromosome, complete genome76.2071 %Subject ←→ Query36.2826
NC_006347:2375480Bacteroides fragilis YCH46, complete genome85.6373 %Subject ←→ Query36.3023
NC_003228:76140Bacteroides fragilis NCTC 9343, complete genome80.4749 %Subject ←→ Query36.3942
NC_003228:945266Bacteroides fragilis NCTC 9343, complete genome80.2267 %Subject ←→ Query36.4957
NC_003228:2245181Bacteroides fragilis NCTC 9343, complete genome77.8033 %Subject ←→ Query36.5516
NC_006347:2190000Bacteroides fragilis YCH46, complete genome80.1103 %Subject ←→ Query36.6093
NC_006347:3082921Bacteroides fragilis YCH46, complete genome77.3284 %Subject ←→ Query36.6429
NC_003228:3455405*Bacteroides fragilis NCTC 9343, complete genome78.1924 %Subject ←→ Query36.8008
NC_006347:1006020Bacteroides fragilis YCH46, complete genome81.0141 %Subject ←→ Query36.8214
NC_004663:5817782Bacteroides thetaiotaomicron VPI-5482, complete genome80.5484 %Subject ←→ Query36.8373
NC_003228:3582728Bacteroides fragilis NCTC 9343, complete genome77.0404 %Subject ←→ Query36.8434
NC_014933:3688000Bacteroides helcogenes P 36-108 chromosome, complete genome77.3192 %Subject ←→ Query36.9285
NC_006347:70607*Bacteroides fragilis YCH46, complete genome82.9596 %Subject ←→ Query36.9529
NC_006347:4562242*Bacteroides fragilis YCH46, complete genome78.5999 %Subject ←→ Query36.9908
NC_003228:3669151Bacteroides fragilis NCTC 9343, complete genome80.7322 %Subject ←→ Query37.0623
NC_006347:3166000*Bacteroides fragilis YCH46, complete genome78.606 %Subject ←→ Query37.2362
NC_003228:3690596Bacteroides fragilis NCTC 9343, complete genome80.7169 %Subject ←→ Query37.335
NC_006347:3760447Bacteroides fragilis YCH46, complete genome83.3977 %Subject ←→ Query37.4153
NC_004663:4137501Bacteroides thetaiotaomicron VPI-5482, complete genome76.0662 %Subject ←→ Query37.5644
NC_004663:4729452Bacteroides thetaiotaomicron VPI-5482, complete genome75.2911 %Subject ←→ Query37.7067
NC_004663:3827521*Bacteroides thetaiotaomicron VPI-5482, complete genome78.5018 %Subject ←→ Query37.7827
NC_003228:3212500*Bacteroides fragilis NCTC 9343, complete genome79.0931 %Subject ←→ Query37.9706
NC_014933:318255Bacteroides helcogenes P 36-108 chromosome, complete genome78.701 %Subject ←→ Query38.1115
NC_014933:901897Bacteroides helcogenes P 36-108 chromosome, complete genome75.1716 %Subject ←→ Query38.3525
NC_014933:3015678Bacteroides helcogenes P 36-108 chromosome, complete genome75.9896 %Subject ←→ Query38.5244
NC_014933:3715467*Bacteroides helcogenes P 36-108 chromosome, complete genome75.6464 %Subject ←→ Query38.7487
NC_014933:510164*Bacteroides helcogenes P 36-108 chromosome, complete genome75.4565 %Subject ←→ Query38.754
NC_004663:2509433*Bacteroides thetaiotaomicron VPI-5482, complete genome79.5925 %Subject ←→ Query38.7706
NC_006347:2899653*Bacteroides fragilis YCH46, complete genome80.3493 %Subject ←→ Query38.8697
NC_014933:979063*Bacteroides helcogenes P 36-108 chromosome, complete genome76.7371 %Subject ←→ Query40.5176
NC_006347:3390193Bacteroides fragilis YCH46, complete genome76.3879 %Subject ←→ Query41.1644
NC_014933:3251000Bacteroides helcogenes P 36-108 chromosome, complete genome77.5429 %Subject ←→ Query41.7498
NC_010803:301753Chlorobium limicola DSM 245, complete genome75.1134 %Subject ←→ Query41.8625
NC_014933:1081844Bacteroides helcogenes P 36-108 chromosome, complete genome76.7739 %Subject ←→ Query42.7468
NC_003228:2973266*Bacteroides fragilis NCTC 9343, complete genome80.7353 %Subject ←→ Query42.7821
NC_006347:143876Bacteroides fragilis YCH46, complete genome80.1869 %Subject Query48.0496