Pre_GI: OUP Neighbours

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Query: NC_006347:2689823 Bacteroides fragilis YCH46, complete genome

D: 44.6486

Host Lineage: Bacteroides fragilis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism can become an opportunistic pathogen, infecting anywhere in the body and causing abcess formation. Enterotoxigenic Bacterioides fragilis (ETBF) is associated with diarrheal diseases. This strain was isolated from a patient with septicemia in Japan. Common gut bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Although only a minor component of the human gut microflora, this organism is a major component of clinical specimens and is the most common anaerobe isolated.

Number of Neighbours: 14




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_009943:1262000Candidatus Desulfococcus oleovorans Hxd3, complete genome76.2714 %Subject Query31.171
NC_015578:3309531*Treponema primitia ZAS-2 chromosome, complete genome75.3401 %Subject Query32.6301
NC_009454:2201987Pelotomaculum thermopropionicum SI, complete genome75.9069 %Subject Query33.0757
NC_015172:1471501Syntrophobotulus glycolicus DSM 8271 chromosome, complete genome75.8946 %Subject ←→ Query34.6617
NC_015578:2428500*Treponema primitia ZAS-2 chromosome, complete genome75.095 %Subject ←→ Query35.6654
NC_009943:305854*Candidatus Desulfococcus oleovorans Hxd3, complete genome75.0827 %Subject ←→ Query37.6177
NC_013740:1943740*Acidaminococcus fermentans DSM 20731, complete genome75.3217 %Subject ←→ Query38.0766
NC_012781:2552723*Eubacterium rectale ATCC 33656, complete genome75.8517 %Subject ←→ Query40.7793
NC_003228:1732497Bacteroides fragilis NCTC 9343, complete genome81.0692 %Subject ←→ Query42.4666
NC_015164:1182469Bacteroides salanitronis DSM 18170 chromosome, complete genome77.1752 %Subject ←→ Query43.3183
NC_016048:4047922*Oscillibacter valericigenes Sjm18-20, complete genome76.9393 %Subject ←→ Query43.3512
NC_003228:2802859Bacteroides fragilis NCTC 9343, complete genome89.0288 %Subject ←→ Query43.8242
NC_010337:616304Heliobacterium modesticaldum Ice1, complete genome78.3701 %Subject ←→ Query46.3964
NC_010337:98974*Heliobacterium modesticaldum Ice1, complete genome76.9577 %Subject ←→ Query49.7889