Pre_GI: OUP MCL Sub Cluster Neighbours

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Query: NC_005363:2172444 Bdellovibrio bacteriovorus HD100, complete genome

D: 32.7335

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host DescriptionProposed Island FlowSubject Island D
NC_015458:2338437*Pusillimonas sp. T7-7 chromosome, complete genomeSubject ←→ Query25.7493
NC_009482:156171*Synechococcus sp. RCC307 chromosome, complete genomeSubject ←→ Query25.8627
NC_009482:1718000Synechococcus sp. RCC307 chromosome, complete genomeSubject ←→ Query26.2561
NC_003450:359759Corynebacterium glutamicum ATCC 13032, complete genomeSubject ←→ Query27.0599
NC_003450:2938404*Corynebacterium glutamicum ATCC 13032, complete genomeSubject ←→ Query27.0599
NC_003450:2244862*Corynebacterium glutamicum ATCC 13032, complete genomeSubject ←→ Query27.0599
NC_003450:1395565*Corynebacterium glutamicum ATCC 13032, complete genomeSubject ←→ Query27.0599
NC_003450:747000Corynebacterium glutamicum ATCC 13032, complete genomeSubject ←→ Query27.0599
NC_003450:627500Corynebacterium glutamicum ATCC 13032, complete genomeSubject ←→ Query27.0599
NC_007947:1703326Methylobacillus flagellatus KT, complete genomeSubject ←→ Query27.3726
NC_005071:1903581*Prochlorococcus marinus str. MIT 9313, complete genomeSubject ←→ Query28.1584
NC_015059:76000Acidobacterium sp. MP5ACTX9 plasmid pACIX904, complete sequenceSubject ←→ Query28.204
NC_014836:1606587Desulfurispirillum indicum S5 chromosome, complete genomeSubject ←→ Query29.0856
NC_005071:1064000*Prochlorococcus marinus str. MIT 9313, complete genomeSubject ←→ Query29.1069
NC_009932:39348*Acaryochloris marina MBIC11017 plasmid pREB7, complete sequenceSubject ←→ Query29.1221
NC_005071:2223795*Prochlorococcus marinus str. MIT 9313, complete genomeSubject ←→ Query29.3187
NC_016642:1913432*Pseudovibrio sp. FO-BEG1 chromosome, complete genomeSubject ←→ Query29.4018
NC_005071:835005*Prochlorococcus marinus str. MIT 9313, complete genomeSubject ←→ Query29.6069
NC_005071:1643557*Prochlorococcus marinus str. MIT 9313, complete genomeSubject ←→ Query29.6767
NC_008260:125500*Alcanivorax borkumensis SK2, complete genomeSubject ←→ Query30.5751
NC_005071:588541*Prochlorococcus marinus str. MIT 9313, complete genomeSubject ←→ Query30.6846
NC_005773:4797242Pseudomonas syringae pv. phaseolicola 1448A, complete genomeSubject ←→ Query30.7403
NC_005071:988815*Prochlorococcus marinus str. MIT 9313, complete genomeSubject ←→ Query30.7727
NC_007947:1229807*Methylobacillus flagellatus KT, complete genomeSubject ←→ Query30.8508
NC_009925:2240871Acaryochloris marina MBIC11017, complete genomeSubject ←→ Query31.0068
NC_008820:2422000Prochlorococcus marinus str. MIT 9303, complete genomeSubject ←→ Query31.3534
NC_005071:288922*Prochlorococcus marinus str. MIT 9313, complete genomeSubject ←→ Query31.4016
NC_008740:1459747Marinobacter aquaeolei VT8, complete genomeSubject ←→ Query31.5515
NC_009925:647752Acaryochloris marina MBIC11017, complete genomeSubject ←→ Query31.7181
NC_008820:1197898*Prochlorococcus marinus str. MIT 9303, complete genomeSubject ←→ Query31.7577
NC_009342:795500Corynebacterium glutamicum R chromosome, complete genomeSubject ←→ Query32.1498
NC_014836:1052214*Desulfurispirillum indicum S5 chromosome, complete genomeSubject ←→ Query32.3453
NC_010995:764567*Cellvibrio japonicus Ueda107, complete genomeSubject ←→ Query32.3748
NC_009342:1538000*Corynebacterium glutamicum R chromosome, complete genomeSubject ←→ Query32.5428
NC_016790:1702856Corynebacterium diphtheriae VA01 chromosome, complete genomeSubject ←→ Query32.7061
NC_005363:2172444Bdellovibrio bacteriovorus HD100, complete genomeSubject ←→ Query32.7335
NC_008738:1Marinobacter aquaeolei VT8 plasmid pMAQU01, complete sequenceSubject ←→ Query32.8252
NC_008319:2172928Synechococcus sp. CC9311, complete genomeSubject ←→ Query32.9067
NC_005071:671084*Prochlorococcus marinus str. MIT 9313, complete genomeSubject ←→ Query33.0978
NC_008319:615135Synechococcus sp. CC9311, complete genomeSubject ←→ Query33.2138
NC_008319:2471341*Synechococcus sp. CC9311, complete genomeSubject ←→ Query33.2594
NC_005071:265520Prochlorococcus marinus str. MIT 9313, complete genomeSubject ←→ Query33.305
NC_016782:1745374Corynebacterium diphtheriae 241 chromosome, complete genomeSubject ←→ Query33.4671
NC_005071:2180000*Prochlorococcus marinus str. MIT 9313, complete genomeSubject ←→ Query33.4729
NC_008740:220642*Marinobacter aquaeolei VT8, complete genomeSubject ←→ Query33.579
NC_008319:1574908*Synechococcus sp. CC9311, complete genomeSubject ←→ Query33.615
NC_008820:2268900Prochlorococcus marinus str. MIT 9303, complete genomeSubject ←→ Query33.6181
NC_009931:117904Acaryochloris marina MBIC11017 plasmid pREB6, complete sequenceSubject ←→ Query33.765
NC_006958:748500Corynebacterium glutamicum ATCC 13032, complete genomeSubject ←→ Query33.8126
NC_016944:168530Vibrio cholerae IEC224 chromosome I, complete sequenceSubject ←→ Query33.8927
NC_014836:223013Desulfurispirillum indicum S5 chromosome, complete genomeSubject ←→ Query33.8956
NC_008820:2512518Prochlorococcus marinus str. MIT 9303, complete genomeSubject ←→ Query33.9312
NC_008820:2027977*Prochlorococcus marinus str. MIT 9303, complete genomeSubject ←→ Query33.9464
NC_014836:993448Desulfurispirillum indicum S5 chromosome, complete genomeSubject ←→ Query34.1406
NC_016788:1730458Corynebacterium diphtheriae HC04 chromosome, complete genomeSubject ←→ Query34.175
NC_008319:1829571Synechococcus sp. CC9311, complete genomeSubject ←→ Query34.3568
NC_016783:1758319Corynebacterium diphtheriae INCA 402 chromosome, complete genomeSubject ←→ Query34.4236
NC_006958:3240019*Corynebacterium glutamicum ATCC 13032, complete genomeSubject ←→ Query34.4905
NC_008319:1601494Synechococcus sp. CC9311, complete genomeSubject ←→ Query34.7737
NC_008319:1119076Synechococcus sp. CC9311, complete genomeSubject ←→ Query35.0962
NC_016802:1709840Corynebacterium diphtheriae HC02 chromosome, complete genomeSubject ←→ Query35.1077
NC_008319:1167213*Synechococcus sp. CC9311, complete genomeSubject ←→ Query35.3982
NC_008319:2335801*Synechococcus sp. CC9311, complete genomeSubject ←→ Query35.4511
NC_008319:787881Synechococcus sp. CC9311, complete genomeSubject ←→ Query35.4794
NC_016445:2593800Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeSubject ←→ Query35.6263
NC_009342:1570000Corynebacterium glutamicum R chromosome, complete genomeSubject ←→ Query35.9109
NC_009342:464210Corynebacterium glutamicum R chromosome, complete genomeSubject ←→ Query36.0452
NC_005071:704882*Prochlorococcus marinus str. MIT 9313, complete genomeSubject ←→ Query36.1335
NC_016785:161498*Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeSubject ←→ Query36.298
NC_008576:3331825Magnetococcus sp. MC-1, complete genomeSubject ←→ Query36.3076
NC_008319:1272251*Synechococcus sp. CC9311, complete genomeSubject ←→ Query36.5068
NC_008319:1376938*Synechococcus sp. CC9311, complete genomeSubject ←→ Query36.5232
NC_006958:628035Corynebacterium glutamicum ATCC 13032, complete genomeSubject ←→ Query37.2121
NC_005773:1135374Pseudomonas syringae pv. phaseolicola 1448A, complete genomeSubject ←→ Query37.2379
NC_008319:1727686Synechococcus sp. CC9311, complete genomeSubject ←→ Query37.4747
NC_007513:1721359*Synechococcus sp. CC9902, complete genomeSubject ←→ Query37.5521
NC_008319:1950889*Synechococcus sp. CC9311, complete genomeSubject ←→ Query37.6604
NC_009342:2211000Corynebacterium glutamicum R chromosome, complete genomeSubject ←→ Query37.7614
NC_009925:5957806Acaryochloris marina MBIC11017, complete genomeSubject ←→ Query37.7888
NC_016799:198091*Corynebacterium diphtheriae 31A chromosome, complete genomeSubject ←→ Query37.9294
NC_005070:1837051*Synechococcus sp. WH 8102, complete genomeSubject ←→ Query38.0502
NC_006958:2911711*Corynebacterium glutamicum ATCC 13032, complete genomeSubject ←→ Query38.2964
NC_006958:2214893*Corynebacterium glutamicum ATCC 13032, complete genomeSubject ←→ Query38.3147
NC_008319:571821*Synechococcus sp. CC9311, complete genomeSubject ←→ Query38.3888
NC_007513:1126914*Synechococcus sp. CC9902, complete genomeSubject ←→ Query38.6261
NC_008820:2595500*Prochlorococcus marinus str. MIT 9303, complete genomeSubject ←→ Query38.6403
NC_008820:211616*Prochlorococcus marinus str. MIT 9303, complete genomeSubject ←→ Query38.7027
NC_007513:1311957*Synechococcus sp. CC9902, complete genomeSubject ←→ Query38.7577
NC_008319:262894Synechococcus sp. CC9311, complete genomeSubject ←→ Query38.7636
NC_007513:942500*Synechococcus sp. CC9902, complete genomeSubject ←→ Query38.8331
NC_005071:172364Prochlorococcus marinus str. MIT 9313, complete genomeSubject ←→ Query39.0173
NC_007513:1807184Synechococcus sp. CC9902, complete genomeSubject ←→ Query39.4133
NC_009342:841500Corynebacterium glutamicum R chromosome, complete genomeSubject ←→ Query39.6291
NC_008319:478499*Synechococcus sp. CC9311, complete genomeSubject ←→ Query39.7114
NC_008570:2216736*Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeSubject ←→ Query39.7209
NC_008319:2007752Synechococcus sp. CC9311, complete genomeSubject ←→ Query39.7864
NC_009928:23424*Acaryochloris marina MBIC11017 plasmid pREB3, complete sequenceSubject ←→ Query39.8418
NC_007516:1561166Synechococcus sp. CC9605, complete genomeSubject ←→ Query40.2364
NC_008820:808886*Prochlorococcus marinus str. MIT 9303, complete genomeSubject ←→ Query40.3537
NC_005070:1331741*Synechococcus sp. WH 8102, complete genomeSubject ←→ Query40.3636
NC_007513:1159497Synechococcus sp. CC9902, complete genomeSubject ←→ Query40.5034
NC_008319:635157*Synechococcus sp. CC9311, complete genomeSubject ←→ Query40.552
NC_007513:987969*Synechococcus sp. CC9902, complete genomeSubject ←→ Query40.8572
NC_005070:1978000*Synechococcus sp. WH 8102, complete genomeSubject ←→ Query41.1479
NC_007513:1388641*Synechococcus sp. CC9902, complete genomeSubject ←→ Query41.552
NC_007513:513806*Synechococcus sp. CC9902, complete genomeSubject ←→ Query41.7857
NC_007513:438438*Synechococcus sp. CC9902, complete genomeSubject ←→ Query41.7874
NC_008319:1081614Synechococcus sp. CC9311, complete genomeSubject ←→ Query42.2304
NC_007516:413159*Synechococcus sp. CC9605, complete genomeSubject ←→ Query42.2379
NC_009092:1441813Shewanella loihica PV-4, complete genomeSubject ←→ Query42.2476
NC_009092:1127000Shewanella loihica PV-4, complete genomeSubject ←→ Query42.3087
NC_007513:1900000*Synechococcus sp. CC9902, complete genomeSubject ←→ Query42.3382
NC_007513:1503955*Synechococcus sp. CC9902, complete genomeSubject ←→ Query42.4597
NC_007516:2037477*Synechococcus sp. CC9605, complete genomeSubject ←→ Query42.4873
NC_014246:1402500*Mobiluncus curtisii ATCC 43063 chromosome, complete genomeSubject ←→ Query42.5475
NC_005070:2181000Synechococcus sp. WH 8102, complete genomeSubject Query42.7584
NC_008820:1356858*Prochlorococcus marinus str. MIT 9303, complete genomeSubject Query42.9268
NC_008319:136863Synechococcus sp. CC9311, complete genomeSubject Query43.0087
NC_007513:632884*Synechococcus sp. CC9902, complete genomeSubject Query43.2321
NC_015424:3520783Aeromonas veronii B565 chromosome, complete genomeSubject Query43.6942
NC_005070:1898612Synechococcus sp. WH 8102, complete genomeSubject Query43.7164
NC_007513:728324*Synechococcus sp. CC9902, complete genomeSubject Query43.8017
NC_006958:359760Corynebacterium glutamicum ATCC 13032, complete genomeSubject Query44.652
NC_005070:1486496Synechococcus sp. WH 8102, complete genomeSubject Query45.9664
NC_004347:4302768Shewanella oneidensis MR-1, complete genomeSubject Query46.1729
NC_008319:171847*Synechococcus sp. CC9311, complete genomeSubject Query46.3349
NC_005070:1588419*Synechococcus sp. WH 8102, complete genomeSubject Query47.0209
NC_007492:3954345Pseudomonas fluorescens PfO-1, complete genomeSubject Query47.3368
NC_007516:1439537*Synechococcus sp. CC9605, complete genomeSubject Query47.9752
NC_007516:1086948*Synechococcus sp. CC9605, complete genomeSubject Query48.4699
NC_007516:1618033Synechococcus sp. CC9605, complete genomeSubject Query50.4569
NC_007516:2277910*Synechococcus sp. CC9605, complete genomeSubject Query50.5095
NC_007516:124486*Synechococcus sp. CC9605, complete genomeSubject Query54.9261
NC_007516:774489*Synechococcus sp. CC9605, complete genomeSubject Query55.3327
NC_005070:2374850*Synechococcus sp. WH 8102, complete genomeSubject Query57.4346