Pre_GI: OUP Neighbours

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Query: NC_004556:2078000 Xylella fastidiosa Temecula1, complete genome

D: 42.5175

Host Lineage: Xylella fastidiosa; Xylella; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1998 from a naturally infected Californian, USA grapevine. This organism was first identified in 1993 as the causal agent of citrus variegated chlorosis, a disease that affects varieties of sweet oranges. Other strains of this species cause a range of diseases in mulberry, pear, almond, elm, sycamore, oak, maple, pecan and coffee which collectively result in multimillion dollar devastation of economically important plants. It does not contain a type III secretion system, but possesses genes for a type II secretion system for export of exoenzymes that degrade the plant cell wall and allow the bacterium to colonize the plant xylem. The cell produces an exopolysaccharide that is similar to the xanthan gum produced by Xanthomonas campestris pv. campestris.

Number of Neighbours: 6

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_013174:923737*Jonesia denitrificans DSM 20603, complete genome75.6801 %Subject Query30.3928
NC_002488:842377Xylella fastidiosa 9a5c, complete genome91.4308 %Subject ←→ Query36.5516
NC_010577:2093261Xylella fastidiosa M23, complete genome96.6115 %Subject ←→ Query42.8364
NC_010577:1188438Xylella fastidiosa M23, complete genome86.7433 %Subject ←→ Query43.0953
NC_004556:1178897Xylella fastidiosa Temecula1, complete genome86.9976 %Subject ←→ Query43.3532
NC_010577:1456909*Xylella fastidiosa M23, complete genome78.6274 %Subject ←→ Query43.5098