Pre_GI: OUP Neighbours

Some Help

Query: NC_004556:151593 Xylella fastidiosa Temecula1, complete genome

D: 39.9027

Host Lineage: Xylella fastidiosa; Xylella; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1998 from a naturally infected Californian, USA grapevine. This organism was first identified in 1993 as the causal agent of citrus variegated chlorosis, a disease that affects varieties of sweet oranges. Other strains of this species cause a range of diseases in mulberry, pear, almond, elm, sycamore, oak, maple, pecan and coffee which collectively result in multimillion dollar devastation of economically important plants. It does not contain a type III secretion system, but possesses genes for a type II secretion system for export of exoenzymes that degrade the plant cell wall and allow the bacterium to colonize the plant xylem. The cell produces an exopolysaccharide that is similar to the xanthan gum produced by Xanthomonas campestris pv. campestris.

Number of Neighbours: 8

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

Select all Donors or Recipients for Query Island

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_002488:2235883Xylella fastidiosa 9a5c, complete genome81.394 %Subject ←→ Query33.7761
NC_002488:45219*Xylella fastidiosa 9a5c, complete genome82.2978 %Subject ←→ Query34.1567
NC_002488:2546495Xylella fastidiosa 9a5c, complete genome80.3707 %Subject ←→ Query34.3385
NC_002488:1157684Xylella fastidiosa 9a5c, complete genome76.8045 %Subject ←→ Query34.9246
NC_002488:2502000*Xylella fastidiosa 9a5c, complete genome79.7733 %Subject ←→ Query35.6822
NC_004556:1933944Xylella fastidiosa Temecula1, complete genome81.2868 %Subject ←→ Query37.8222
NC_004556:1132354*Xylella fastidiosa Temecula1, complete genome76.6912 %Subject ←→ Query38.8649
NC_004556:1611973Xylella fastidiosa Temecula1, complete genome81.9608 %Subject ←→ Query42.9799