Pre_GI: OUP Neighbours

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Query: NC_004556:1076063 Xylella fastidiosa Temecula1, complete genome

D: 42.5799

Host Lineage: Xylella fastidiosa; Xylella; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1998 from a naturally infected Californian, USA grapevine. This organism was first identified in 1993 as the causal agent of citrus variegated chlorosis, a disease that affects varieties of sweet oranges. Other strains of this species cause a range of diseases in mulberry, pear, almond, elm, sycamore, oak, maple, pecan and coffee which collectively result in multimillion dollar devastation of economically important plants. It does not contain a type III secretion system, but possesses genes for a type II secretion system for export of exoenzymes that degrade the plant cell wall and allow the bacterium to colonize the plant xylem. The cell produces an exopolysaccharide that is similar to the xanthan gum produced by Xanthomonas campestris pv. campestris.

Number of Neighbours: 14




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_010577:1087092Xylella fastidiosa M23, complete genome94.5251 %Subject ←→ Query42.7341
NC_002488:1812696Xylella fastidiosa 9a5c, complete genome84.4118 %Subject ←→ Query38.8176
NC_002488:1157684Xylella fastidiosa 9a5c, complete genome80.0123 %Subject ←→ Query34.9246
NC_014733:1857020Methylovorus sp. MP688 chromosome, complete genome78.0944 %Subject ←→ Query34.8096
NC_004556:1933944Xylella fastidiosa Temecula1, complete genome76.9087 %Subject ←→ Query37.8222
NC_002488:2546495Xylella fastidiosa 9a5c, complete genome76.6115 %Subject ←→ Query34.3385
NC_006370:166000Photobacterium profundum SS9 chromosome 1, complete sequence76.0263 %Subject Query28.1736
NC_012982:1282856Hirschia baltica ATCC 49814, complete genome75.674 %Subject Query27.7724
NC_004556:1611973Xylella fastidiosa Temecula1, complete genome75.5729 %Subject ←→ Query42.9799
NC_011753:3088952*Vibrio splendidus LGP32 chromosome 1, complete genome75.5024 %Subject Query27.9102
NC_002488:45219*Xylella fastidiosa 9a5c, complete genome75.3891 %Subject ←→ Query34.1567
NC_010611:240839Acinetobacter baumannii ACICU, complete genome75.3738 %Subject ←→ Query48.2217
NC_015731:169989Nitrosomonas sp. Is79A3 chromosome, complete genome75.3094 %Subject Query27.6873
NC_012968:435532Methylotenera mobilis JLW8, complete genome75.1134 %Subject Query29.6632