Pre_GI: OUP Neighbours

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Query: NC_004431:1211000 Escherichia coli CFT073, complete genome

D: 37.0893

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (CFT073; O6:K2:H1) is uropathogenic E. coli (UPEC) one of the most common causes of non-hospital-acquired urinary tract infections. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

Number of Neighbours: 60

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_013717:5726Citrobacter rodentium ICC168 plasmid pCROD1, complete sequence81.7249 %Subject Query25.079
NC_011750:1094000Escherichia coli IAI39 chromosome, complete genome75.5699 %Subject ←→ Query28.554
CP002797:4603787*Escherichia coli NA114, complete genome79.0104 %Subject ←→ Query30.3309
NC_007613:1038000Shigella boydii Sb227, complete genome77.2426 %Subject ←→ Query30.5697
NC_009800:349592*Escherichia coli HS, complete genome76.777 %Subject ←→ Query30.8783
NC_002655:1103991Escherichia coli O157:H7 EDL933, complete genome79.8131 %Subject ←→ Query31.019
NC_002695:1417912Escherichia coli O157:H7 str. Sakai, complete genome77.3162 %Subject ←→ Query31.3382
NC_008563:2041345Escherichia coli APEC O1, complete genome76.9271 %Subject ←→ Query31.3432
AP010958:2455052*Escherichia coli O103:H2 str. 12009 DNA, complete genome76.5196 %Subject ←→ Query31.4202
CP002797:2062006*Escherichia coli NA114, complete genome76.3082 %Subject ←→ Query31.7624
NC_008253:3122148*Escherichia coli 536, complete genome79.0931 %Subject ←→ Query32.0871
NC_011750:3545466*Escherichia coli IAI39 chromosome, complete genome81.106 %Subject ←→ Query32.5632
NC_008253:4735418Escherichia coli 536, complete genome76.9393 %Subject ←→ Query32.6562
NC_011751:256830Escherichia coli UMN026 chromosome, complete genome75.3094 %Subject ←→ Query32.8338
NC_011748:3958572Escherichia coli 55989, complete genome75.9804 %Subject ←→ Query33.3232
CU928145:3958572Escherichia coli 55989 chromosome, complete genome75.9804 %Subject ←→ Query33.3232
NC_008253:4817864Escherichia coli 536, complete genome76.1857 %Subject ←→ Query33.3548
NC_007946:4875997Escherichia coli UTI89, complete genome75.7322 %Subject ←→ Query33.512
NC_011750:4390000Escherichia coli IAI39 chromosome, complete genome76.5043 %Subject ←→ Query33.521
NC_008253:334467*Escherichia coli 536, complete genome80.0919 %Subject ←→ Query34.2564
NC_007946:4779745Escherichia coli UTI89, complete genome78.2353 %Subject ←→ Query34.3298
NC_010658:1933605*Shigella boydii CDC 3083-94, complete genome76.97 %Subject ←→ Query34.3978
NC_007941:11319Escherichia coli UTI89 plasmid pUTI89, complete sequence80.5024 %Subject ←→ Query34.4019
NC_011083:338910Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,76.3051 %Subject ←→ Query34.6863
NC_004431:324000Escherichia coli CFT073, complete genome81.1489 %Subject ←→ Query34.8012
NC_008253:296500Escherichia coli 536, complete genome81.204 %Subject ←→ Query35.2505
NC_010488:48868Escherichia coli SMS-3-5 plasmid pSMS35_130, complete sequence76.1765 %Subject ←→ Query35.6499
NC_011750:4775770Escherichia coli IAI39 chromosome, complete genome80.7904 %Subject ←→ Query35.7604
NC_002695:1794635Escherichia coli O157:H7 str. Sakai, complete genome75.8303 %Subject ←→ Query35.9924
NC_003198:331314Salmonella enterica subsp. enterica serovar Typhi str. CT18,76.0846 %Subject ←→ Query36.1232
NC_008563:3332114Escherichia coli APEC O1, complete genome75.6464 %Subject ←→ Query36.3496
NC_004631:2615908Salmonella enterica subsp. enterica serovar Typhi Ty2, complete77.2457 %Subject ←→ Query36.5722
NC_008253:3941938*Escherichia coli 536, complete genome76.3603 %Subject ←→ Query36.7085
CP002797:4775780Escherichia coli NA114, complete genome79.3811 %Subject ←→ Query37.0319
NC_006511:2540500Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC76.587 %Subject ←→ Query37.0863
NC_004431:1166568Escherichia coli CFT073, complete genome80.6495 %Subject ←→ Query37.2232
NC_006905:326517Salmonella enterica subsp. enterica serovar Choleraesuis str77.212 %Subject ←→ Query37.465
NC_004431:3409389*Escherichia coli CFT073, complete genome85.5576 %Subject ←→ Query37.4762
NC_011751:3453683Escherichia coli UMN026 chromosome, complete genome85.1838 %Subject ←→ Query37.7715
NC_008253:3161311Escherichia coli 536, complete genome76.5931 %Subject ←→ Query37.787
NC_002655:1053082Escherichia coli O157:H7 EDL933, complete genome75.5239 %Subject ←→ Query37.8144
NC_007946:1119000*Escherichia coli UTI89, complete genome90.3064 %Subject ←→ Query37.8204
AP010958:3853082*Escherichia coli O103:H2 str. 12009 DNA, complete genome79.2923 %Subject ←→ Query37.9582
AP010958:2272919Escherichia coli O103:H2 str. 12009 DNA, complete genome76.8045 %Subject ←→ Query38.2003
NC_014228:3353896Xenorhabdus nematophila ATCC 19061, complete genome75.6648 %Subject ←→ Query38.8102
NC_002655:3919545Escherichia coli O157:H7 EDL933, complete genome78.0576 %Subject ←→ Query39.1881
NC_004431:279868Escherichia coli CFT073, complete genome82.5735 %Subject ←→ Query39.5292
NC_002695:3852233Escherichia coli O157:H7 str. Sakai, complete genome78.0423 %Subject ←→ Query40.3549
NC_002128:35000Escherichia coli O157:H7 str. Sakai plasmid pO157, complete77.7451 %Subject ←→ Query41.037
NC_002695:1571389Escherichia coli O157:H7 str. Sakai, complete genome75.1532 %Subject ←→ Query41.3174
NC_007414:56508Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequence79.2004 %Subject ←→ Query42.1367
NC_015567:346500Serratia sp. AS9 chromosome, complete genome75.1471 %Subject ←→ Query42.2995
NC_009790:42112Escherichia coli E24377A plasmid pETEC_74, complete sequence81.1458 %Subject ←→ Query42.3754
AP010958:1305712Escherichia coli O103:H2 str. 12009 DNA, complete genome75.383 %Subject ←→ Query42.7374
NC_011748:3360967*Escherichia coli 55989, complete genome75.2543 %Subject ←→ Query42.7659
CU928145:3360967*Escherichia coli 55989 chromosome, complete genome75.2543 %Subject ←→ Query42.7659
AP010958:5090696*Escherichia coli O103:H2 str. 12009 DNA, complete genome77.8676 %Subject ←→ Query42.8493
AP010958:3627355Escherichia coli O103:H2 str. 12009 DNA, complete genome78.9093 %Subject ←→ Query43.1575
NC_004851:191709Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence82.5153 %Subject ←→ Query44.8472
NC_015963:4500Enterobacter asburiae LF7a plasmid pENTAS01, complete sequence75.4442 %Subject Query47.8868