Pre_GI: OUP Neighbours

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Query: NC_004431:1166568 Escherichia coli CFT073, complete genome

D: 37.2232

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (CFT073; O6:K2:H1) is uropathogenic E. coli (UPEC) one of the most common causes of non-hospital-acquired urinary tract infections. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

Number of Neighbours: 140




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_013717:5726Citrobacter rodentium ICC168 plasmid pCROD1, complete sequence83.5938 %Subject Query25.079
NC_013132:2523780*Chitinophaga pinensis DSM 2588, complete genome76.1336 %Subject Query25.7326
NC_013132:8871718Chitinophaga pinensis DSM 2588, complete genome76.1612 %Subject ←→ Query27.6994
NC_008258:2045000*Shigella flexneri 5 str. 8401, complete genome76.9608 %Subject ←→ Query27.7177
NC_011740:1991941*Escherichia fergusonii ATCC 35469, complete genome75.9069 %Subject ←→ Query27.7754
NC_015672:203139*Flexistipes sinusarabici DSM 4947 chromosome, complete genome75.7353 %Subject ←→ Query28.0642
NC_014561:76931Pantoea vagans C9-1 plasmid pPag1, complete sequence75.2696 %Subject ←→ Query28.2071
NC_011750:1094000Escherichia coli IAI39 chromosome, complete genome76.4461 %Subject ←→ Query28.554
NC_011740:1831845Escherichia fergusonii ATCC 35469, complete genome78.5447 %Subject ←→ Query28.5567
CU928159:30700*Escherichia coli str. 55989 plasmid 55989p, complete genome79.0931 %Subject ←→ Query28.6357
CP002797:2472908Escherichia coli NA114, complete genome76.1612 %Subject ←→ Query29.1859
NC_010498:1117938Escherichia coli SMS-3-5, complete genome79.5466 %Subject ←→ Query29.8896
NC_011748:824367Escherichia coli 55989, complete genome75.1838 %Subject ←→ Query30.0584
CU928145:824367Escherichia coli 55989 chromosome, complete genome75.1838 %Subject ←→ Query30.0584
NC_011740:2737467Escherichia fergusonii ATCC 35469, complete genome76.0172 %Subject ←→ Query30.2078
CP002797:4603787*Escherichia coli NA114, complete genome78.9461 %Subject ←→ Query30.3309
NC_006511:1654959*Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC75.6771 %Subject ←→ Query30.5174
NC_007613:1038000Shigella boydii Sb227, complete genome78.7653 %Subject ←→ Query30.5697
NC_004337:2035945Shigella flexneri 2a str. 301, complete genome76.1121 %Subject ←→ Query30.5778
NC_009800:349592*Escherichia coli HS, complete genome77.4694 %Subject ←→ Query30.8783
NC_002655:1103991Escherichia coli O157:H7 EDL933, complete genome85.3585 %Subject ←→ Query31.019
NC_002695:1417912Escherichia coli O157:H7 str. Sakai, complete genome84.2034 %Subject ←→ Query31.3382
NC_008563:2041345Escherichia coli APEC O1, complete genome75.1256 %Subject ←→ Query31.3432
AP010958:2455052*Escherichia coli O103:H2 str. 12009 DNA, complete genome78.1373 %Subject ←→ Query31.4202
NC_007946:1632025Escherichia coli UTI89, complete genome75.0092 %Subject ←→ Query31.5613
NC_010468:2265423*Escherichia coli ATCC 8739, complete genome76.924 %Subject ←→ Query31.6845
NC_014219:2284000Bacillus selenitireducens MLS10 chromosome, complete genome75.0919 %Subject ←→ Query31.7181
CP002797:2062006*Escherichia coli NA114, complete genome77.3039 %Subject ←→ Query31.7624
NC_007384:3741708Shigella sonnei Ss046, complete genome75.0551 %Subject ←→ Query32.0692
NC_008253:3122148*Escherichia coli 536, complete genome81.5012 %Subject ←→ Query32.0871
NC_009792:923155Citrobacter koseri ATCC BAA-895, complete genome75.1624 %Subject ←→ Query32.2061
NC_011750:3545466*Escherichia coli IAI39 chromosome, complete genome82.6348 %Subject ←→ Query32.5632
NC_004741:2009769Shigella flexneri 2a str. 2457T, complete genome76.4124 %Subject ←→ Query32.5875
NC_008253:4735418Escherichia coli 536, complete genome86.829 %Subject ←→ Query32.6562
NC_009801:1756610Escherichia coli E24377A, complete genome76.9148 %Subject ←→ Query32.6826
NC_004757:1089057Nitrosomonas europaea ATCC 19718, complete genome76.0784 %Subject ←→ Query32.9209
NC_011750:4947500*Escherichia coli IAI39 chromosome, complete genome77.9473 %Subject ←→ Query32.9361
CP002516:2305659*Escherichia coli KO11, complete genome76.8321 %Subject ←→ Query33.0931
NC_000913:1188999*Escherichia coli K12, complete genome75.72 %Subject ←→ Query33.149
NC_010102:2762304Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,79.6752 %Subject ←→ Query33.1712
NC_011750:1978801Escherichia coli IAI39 chromosome, complete genome76.5962 %Subject ←→ Query33.1799
NC_006511:1063249Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC75.579 %Subject ←→ Query33.2411
NC_008253:4817864Escherichia coli 536, complete genome75.6005 %Subject ←→ Query33.3548
NC_007946:4875997Escherichia coli UTI89, complete genome76.4154 %Subject ←→ Query33.512
NC_011750:4390000Escherichia coli IAI39 chromosome, complete genome77.6838 %Subject ←→ Query33.521
NC_004741:3041294*Shigella flexneri 2a str. 2457T, complete genome75.9007 %Subject ←→ Query33.6878
NC_010473:1712984*Escherichia coli str. K-12 substr. DH10B, complete genome75.9375 %Subject ←→ Query33.9207
NC_010067:892729*Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete77.932 %Subject ←→ Query33.9375
NC_010498:2278306Escherichia coli SMS-3-5, complete genome79.8254 %Subject ←→ Query34.2186
NC_008253:334467*Escherichia coli 536, complete genome80.6832 %Subject ←→ Query34.2564
AC_000091:558920Escherichia coli W3110 DNA, complete genome77.546 %Subject ←→ Query34.3271
NC_007946:4779745Escherichia coli UTI89, complete genome88.7531 %Subject ←→ Query34.3298
NC_010658:1933605*Shigella boydii CDC 3083-94, complete genome76.5594 %Subject ←→ Query34.3978
NC_007941:11319Escherichia coli UTI89 plasmid pUTI89, complete sequence76.8444 %Subject ←→ Query34.4019
AC_000091:1627049Escherichia coli W3110 DNA, complete genome75.5239 %Subject ←→ Query34.4611
CU928145:1408280*Escherichia coli 55989 chromosome, complete genome78.4314 %Subject ←→ Query34.5817
NC_011748:1408280*Escherichia coli 55989, complete genome78.4314 %Subject ←→ Query34.5817
NC_000913:558920*Escherichia coli K12, complete genome78.3701 %Subject ←→ Query34.6124
NC_010473:498252*Escherichia coli str. K-12 substr. DH10B, complete genome78.2567 %Subject ←→ Query34.6343
NC_000913:1625500*Escherichia coli K12, complete genome76.3266 %Subject ←→ Query34.6375
NC_004431:324000Escherichia coli CFT073, complete genome82.4908 %Subject ←→ Query34.8012
NC_011740:2859933Escherichia fergusonii ATCC 35469, complete genome75.7935 %Subject ←→ Query34.9604
NC_010158:1*Yersinia pestis Angola plasmid pMT-pPCP, complete sequence75.6771 %Subject ←→ Query35.0134
NC_010067:1655815*Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete75.9589 %Subject ←→ Query35.2017
NC_013421:701005Pectobacterium wasabiae WPP163, complete genome76.9761 %Subject ←→ Query35.2447
NC_008253:296500Escherichia coli 536, complete genome91.0754 %Subject ←→ Query35.2505
NC_010488:48868Escherichia coli SMS-3-5 plasmid pSMS35_130, complete sequence79.6201 %Subject ←→ Query35.6499
NC_011750:4775770Escherichia coli IAI39 chromosome, complete genome83.9951 %Subject ←→ Query35.7604
NC_010498:2555706Escherichia coli SMS-3-5, complete genome79.3413 %Subject ←→ Query35.8686
CU928160:1668842Escherichia coli IAI1 chromosome, complete genome75.0858 %Subject ←→ Query35.948
NC_008563:1217804Escherichia coli APEC O1, complete genome75.2237 %Subject ←→ Query35.9491
NC_002695:1794635Escherichia coli O157:H7 str. Sakai, complete genome81.0539 %Subject ←→ Query35.9924
NC_011083:4547825Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,79.1452 %Subject ←→ Query36.0169
NC_011751:1859606Escherichia coli UMN026 chromosome, complete genome76.9455 %Subject ←→ Query36.2006
NC_008563:3332114Escherichia coli APEC O1, complete genome81.921 %Subject ←→ Query36.3496
NC_004431:2747237Escherichia coli CFT073, complete genome79.5864 %Subject ←→ Query36.3806
NC_009786:43331Escherichia coli E24377A plasmid pETEC_80, complete sequence79.1391 %Subject ←→ Query36.4529
AC_000091:1191353*Escherichia coli W3110 DNA, complete genome75.8425 %Subject ←→ Query36.4616
NC_004631:2615908Salmonella enterica subsp. enterica serovar Typhi Ty2, complete80.769 %Subject ←→ Query36.5722
NC_008253:3941938*Escherichia coli 536, complete genome85.0245 %Subject ←→ Query36.7085
NC_002655:3538656*Escherichia coli O157:H7 EDL933, complete genome76.2071 %Subject ←→ Query36.7786
NC_002695:3468873*Escherichia coli O157:H7 str. Sakai, complete genome77.7451 %Subject ←→ Query36.813
CP002797:4775780Escherichia coli NA114, complete genome84.8989 %Subject ←→ Query37.0319
NC_011751:1446073Escherichia coli UMN026 chromosome, complete genome76.5625 %Subject ←→ Query37.0661
NC_006511:2540500Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC81.5717 %Subject ←→ Query37.0863
NC_014305:66500Erwinia billingiae Eb661 plasmid pEB170, complete sequence76.9332 %Subject ←→ Query37.0879
NC_004431:1211000*Escherichia coli CFT073, complete genome80.6495 %Subject ←→ Query37.0893
NC_002655:1448605Escherichia coli O157:H7 EDL933, complete genome80.6097 %Subject ←→ Query37.1546
NC_009801:2898426*Escherichia coli E24377A, complete genome75.913 %Subject ←→ Query37.4412
NC_006905:326517Salmonella enterica subsp. enterica serovar Choleraesuis str77.2089 %Subject ←→ Query37.465
NC_004431:3409389*Escherichia coli CFT073, complete genome86.1336 %Subject ←→ Query37.4762
NC_012962:3933715Photorhabdus asymbiotica, complete genome75.9589 %Subject ←→ Query37.6621
NC_002695:1364833Escherichia coli O157:H7 str. Sakai, complete genome80.2543 %Subject ←→ Query37.7023
NC_011751:3453683Escherichia coli UMN026 chromosome, complete genome85.6342 %Subject ←→ Query37.7715
NC_009649:94871Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,75.2574 %Subject ←→ Query37.7857
NC_008253:3161311Escherichia coli 536, complete genome78.1587 %Subject ←→ Query37.787
NC_002655:1053082Escherichia coli O157:H7 EDL933, complete genome81.7678 %Subject ←→ Query37.8144
NC_007946:1119000*Escherichia coli UTI89, complete genome81.9547 %Subject ←→ Query37.8204
NC_013421:1696746*Pectobacterium wasabiae WPP163, complete genome75.098 %Subject ←→ Query37.8565
AP010958:3853082*Escherichia coli O103:H2 str. 12009 DNA, complete genome79.7365 %Subject ←→ Query37.9582
NC_007946:1073135Escherichia coli UTI89, complete genome76.2806 %Subject ←→ Query38.0761
AP010958:2272919Escherichia coli O103:H2 str. 12009 DNA, complete genome75.769 %Subject ←→ Query38.2003
NC_010102:1779707Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,75.4841 %Subject ←→ Query38.4493
NC_011149:309556Salmonella enterica subsp. enterica serovar Agona str. SL483,76.8934 %Subject ←→ Query38.5236
NC_002655:301940Escherichia coli O157:H7 EDL933, complete genome75.769 %Subject ←→ Query39.0763
NC_002655:3919545Escherichia coli O157:H7 EDL933, complete genome77.5705 %Subject ←→ Query39.1881
NC_014228:1712339*Xenorhabdus nematophila ATCC 19061, complete genome75.6832 %Subject ←→ Query39.3595
NC_004431:279868Escherichia coli CFT073, complete genome84.2279 %Subject ←→ Query39.5292
NC_009788:16360Escherichia coli E24377A plasmid pETEC_73, complete sequence80.1134 %Subject ←→ Query39.7806
NC_002695:301939Escherichia coli O157:H7 str. Sakai, complete genome75.4044 %Subject ←→ Query39.811
NC_010554:2872000Proteus mirabilis HI4320, complete genome79.6752 %Subject ←→ Query40.1143
NC_002695:3852233Escherichia coli O157:H7 str. Sakai, complete genome77.6838 %Subject ←→ Query40.3549
NC_014839:170000Pantoea sp. At-9b plasmid pPAT9B02, complete sequence76.0172 %Subject ←→ Query40.4426
NC_010067:2304313*Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete77.6991 %Subject ←→ Query40.6544
NC_002128:35000Escherichia coli O157:H7 str. Sakai plasmid pO157, complete77.6869 %Subject ←→ Query41.037
NC_002695:1571389Escherichia coli O157:H7 str. Sakai, complete genome79.6538 %Subject ←→ Query41.3174
NC_002655:1655944Escherichia coli O157:H7 EDL933, complete genome80.0061 %Subject ←→ Query41.582
NC_007414:56508Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequence77.5735 %Subject ←→ Query42.1367
NC_015567:346500Serratia sp. AS9 chromosome, complete genome76.1305 %Subject ←→ Query42.2995
NC_009790:42112Escherichia coli E24377A plasmid pETEC_74, complete sequence84.0472 %Subject ←→ Query42.3754
NC_002655:4653160Escherichia coli O157:H7 EDL933, complete genome75.4534 %Subject ←→ Query42.393
AP010958:3669500Escherichia coli O103:H2 str. 12009 DNA, complete genome79.1973 %Subject ←→ Query42.6045
NC_013716:5201097*Citrobacter rodentium ICC168, complete genome75.6587 %Subject ←→ Query42.6129
AP010958:1305712Escherichia coli O103:H2 str. 12009 DNA, complete genome76.4062 %Subject ←→ Query42.7374
NC_011748:3360967*Escherichia coli 55989, complete genome87.2886 %Subject ←→ Query42.7659
CU928145:3360967*Escherichia coli 55989 chromosome, complete genome87.2886 %Subject ←→ Query42.7659
AP010958:5090696*Escherichia coli O103:H2 str. 12009 DNA, complete genome79.8928 %Subject ←→ Query42.8493
NC_002695:4584177Escherichia coli O157:H7 str. Sakai, complete genome75.4442 %Subject ←→ Query42.9915
AP010958:3627355Escherichia coli O103:H2 str. 12009 DNA, complete genome82.0006 %Subject ←→ Query43.1575
NC_014839:12519Pantoea sp. At-9b plasmid pPAT9B02, complete sequence75.1746 %Subject ←→ Query43.2099
NC_015566:345084Serratia sp. AS12 chromosome, complete genome76.4675 %Subject ←→ Query43.9354
NC_013716:3327881Citrobacter rodentium ICC168, complete genome79.5251 %Subject ←→ Query44.6889
NC_013961:3269368*Erwinia amylovora, complete genome77.742 %Subject ←→ Query44.7095
NC_004851:191709Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence78.701 %Subject ←→ Query44.8472
NC_013716:4306695*Citrobacter rodentium ICC168, complete genome76.8168 %Subject ←→ Query44.9938
NC_010660:86445Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence77.8156 %Subject ←→ Query45.1069
NC_014839:253961*Pantoea sp. At-9b plasmid pPAT9B02, complete sequence77.4632 %Subject ←→ Query46.3854
NC_015663:1Enterobacter aerogenes KCTC 2190 chromosome, complete genome77.4571 %Subject ←→ Query46.7179
NC_015963:4500Enterobacter asburiae LF7a plasmid pENTAS01, complete sequence77.7328 %Subject Query47.8868
NC_015963:117178Enterobacter asburiae LF7a plasmid pENTAS01, complete sequence79.6293 %Subject Query52.6759