Pre_GI: OUP Neighbours

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Query: NC_004347:3197219 Shewanella oneidensis MR-1, complete genome

D: 30.7018

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.

Number of Neighbours: 141




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_007954:2440000*Shewanella denitrificans OS217, complete genome76.8352 %Subject ←→ Query24.4194
NC_016041:2420098Glaciecola nitratireducens FR1064 chromosome, complete genome75.242 %Subject ←→ Query24.8954
NC_015497:2997275*Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome76.587 %Subject ←→ Query25.0122
NC_008345:3199965Shewanella frigidimarina NCIMB 400, complete genome78.0637 %Subject ←→ Query25.0699
NC_015497:3497680Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome77.3376 %Subject ←→ Query25.5502
NC_015637:669593Vibrio anguillarum 775 chromosome chromosome II, complete sequence76.5778 %Subject ←→ Query25.6019
NC_015637:325561Vibrio anguillarum 775 chromosome chromosome II, complete sequence75.5729 %Subject ←→ Query25.9135
NC_011566:3994239*Shewanella piezotolerans WP3, complete genome78.3088 %Subject ←→ Query26.295
NC_013166:242863Kangiella koreensis DSM 16069, complete genome75.3952 %Subject ←→ Query26.5108
NC_008228:2295841*Pseudoalteromonas atlantica T6c, complete genome75.7292 %Subject ←→ Query26.5139
NC_015637:891842Vibrio anguillarum 775 chromosome chromosome II, complete sequence75.4167 %Subject ←→ Query26.5351
NC_015222:983647Nitrosomonas sp. AL212 chromosome, complete genome75.1501 %Subject ←→ Query26.7844
NC_013166:784339Kangiella koreensis DSM 16069, complete genome75.7629 %Subject ←→ Query26.7966
NC_008526:2373190Lactobacillus casei ATCC 334, complete genome75.1746 %Subject ←→ Query26.8543
NC_010999:2516000Lactobacillus casei, complete genome75.3891 %Subject ←→ Query27.1158
NC_009052:4437649*Shewanella baltica OS155, complete genome81.6728 %Subject ←→ Query27.2282
NC_008228:372520*Pseudoalteromonas atlantica T6c, complete genome75.7751 %Subject ←→ Query27.3377
NC_009997:3661083Shewanella baltica OS195, complete genome81.4491 %Subject ←→ Query27.3924
NC_009901:4899535Shewanella pealeana ATCC 700345, complete genome75.9344 %Subject ←→ Query27.4349
NC_015224:2618192*Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,76.1642 %Subject ←→ Query27.59
NC_015222:94847Nitrosomonas sp. AL212 chromosome, complete genome75.3585 %Subject ←→ Query27.6612
NC_010334:3224009Shewanella halifaxensis HAW-EB4, complete genome78.9277 %Subject ←→ Query27.7481
NC_007954:1823085*Shewanella denitrificans OS217, complete genome78.03 %Subject ←→ Query27.7501
NC_008750:1659095*Shewanella sp. W3-18-1, complete genome76.7647 %Subject ←→ Query28.1007
NC_012968:1191037Methylotenera mobilis JLW8, complete genome76.2776 %Subject ←→ Query28.1939
NC_009052:4335754Shewanella baltica OS155, complete genome79.9602 %Subject ←→ Query28.274
NC_015497:1058980Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome78.0607 %Subject ←→ Query28.3135
NC_004347:4441110Shewanella oneidensis MR-1, complete genome77.6869 %Subject ←→ Query28.4344
NC_008150:4561633*Yersinia pestis Antiqua, complete genome75.5116 %Subject ←→ Query28.4594
NC_012913:1832500*Aggregatibacter aphrophilus NJ8700, complete genome75.9161 %Subject ←→ Query28.5015
NC_015224:4101939*Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.0643 %Subject ←→ Query28.505
NC_015224:1440283Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.8241 %Subject ←→ Query28.5415
NC_012968:2228943*Methylotenera mobilis JLW8, complete genome77.6195 %Subject ←→ Query28.5567
NC_015224:1641819*Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,76.7984 %Subject ←→ Query28.5984
NC_007954:3887488Shewanella denitrificans OS217, complete genome80.2022 %Subject ←→ Query28.7444
NC_007954:1494291Shewanella denitrificans OS217, complete genome76.2255 %Subject ←→ Query28.7564
NC_010465:3958766Yersinia pseudotuberculosis YPIII, complete genome75.2298 %Subject ←→ Query28.7816
NC_009999:38832Shewanella baltica OS195 plasmid pS19502, complete sequence79.6875 %Subject ←→ Query28.8515
NC_009052:2683447*Shewanella baltica OS155, complete genome79.4761 %Subject ←→ Query28.9093
NC_010531:708049Polynucleobacter necessarius STIR1, complete genome75.0184 %Subject ←→ Query28.9112
NC_010159:3169266Yersinia pestis Angola, complete genome76.5319 %Subject ←→ Query29.1008
NC_009997:2585588Shewanella baltica OS195, complete genome78.9645 %Subject ←→ Query29.1282
NC_004088:4116676Yersinia pestis KIM, complete genome75.4504 %Subject ←→ Query29.2173
NC_009997:415808Shewanella baltica OS195, complete genome79.9816 %Subject ←→ Query29.2589
NC_003143:483395*Yersinia pestis CO92, complete genome75.5239 %Subject ←→ Query29.2984
NC_010159:409500*Yersinia pestis Angola, complete genome76.0233 %Subject ←→ Query29.3874
NC_009997:3583166Shewanella baltica OS195, complete genome77.4387 %Subject ←→ Query29.4446
NC_009997:3483157*Shewanella baltica OS195, complete genome75.1808 %Subject ←→ Query29.4747
NC_008228:776000Pseudoalteromonas atlantica T6c, complete genome76.6667 %Subject ←→ Query29.4808
NC_013199:2426686Lactobacillus rhamnosus Lc 705, complete genome75.864 %Subject ←→ Query29.5122
NC_009997:2967521*Shewanella baltica OS195, complete genome77.837 %Subject ←→ Query29.575
NC_009997:5188221Shewanella baltica OS195, complete genome77.0803 %Subject ←→ Query29.6455
NC_009901:3317068Shewanella pealeana ATCC 700345, complete genome78.0882 %Subject ←→ Query29.6662
NC_008750:807446Shewanella sp. W3-18-1, complete genome79.7947 %Subject ←→ Query29.7696
NC_006512:1722138*Idiomarina loihiensis L2TR, complete genome75.0276 %Subject ←→ Query29.7775
NC_005139:518760Vibrio vulnificus YJ016 chromosome I, complete sequence76.0601 %Subject ←→ Query29.8091
NC_010465:2282874Yersinia pseudotuberculosis YPIII, complete genome75.2206 %Subject ←→ Query29.8112
NC_009052:4168776*Shewanella baltica OS155, complete genome76.7433 %Subject ←→ Query29.8197
NC_008750:3435495*Shewanella sp. W3-18-1, complete genome81.201 %Subject ←→ Query29.9064
NC_009654:4253431*Marinomonas sp. MWYL1, complete genome75.337 %Subject ←→ Query29.9246
NC_004347:3670145*Shewanella oneidensis MR-1, complete genome78.1801 %Subject ←→ Query29.9322
NC_013198:2458080Lactobacillus rhamnosus GG, complete genome76.155 %Subject ←→ Query29.954
NC_009901:2787978Shewanella pealeana ATCC 700345, complete genome75.3799 %Subject ←→ Query29.9683
NC_004347:718091Shewanella oneidensis MR-1, complete genome84.4363 %Subject ←→ Query30.0041
NC_008149:402599*Yersinia pestis Nepal516, complete genome75.4442 %Subject ←→ Query30.0082
NC_009052:2512373Shewanella baltica OS155, complete genome77.261 %Subject ←→ Query30.0584
NC_008321:3512471Shewanella sp. MR-4, complete genome75.1317 %Subject ←→ Query30.0796
NC_003143:1691000Yersinia pestis CO92, complete genome77.4847 %Subject ←→ Query30.0863
NC_006155:713174*Yersinia pseudotuberculosis IP 32953, complete genome75.4136 %Subject ←→ Query30.0948
NC_005810:4045303Yersinia pestis biovar Microtus str. 91001, complete genome75.3615 %Subject ←→ Query30.1313
NC_009654:91096*Marinomonas sp. MWYL1, complete genome75.049 %Subject ←→ Query30.2225
NC_008322:4611000Shewanella sp. MR-7, complete genome75.8149 %Subject ←→ Query30.2256
NC_008322:2637646*Shewanella sp. MR-7, complete genome79.0839 %Subject ←→ Query30.2286
NC_012968:239476*Methylotenera mobilis JLW8, complete genome75.579 %Subject ←→ Query30.2298
NC_004347:791897Shewanella oneidensis MR-1, complete genome81.0202 %Subject ←→ Query30.2408
NC_009901:3148901Shewanella pealeana ATCC 700345, complete genome80.4105 %Subject ←→ Query30.316
NC_009654:1729159*Marinomonas sp. MWYL1, complete genome76.1489 %Subject ←→ Query30.3593
NC_008321:2569315*Shewanella sp. MR-4, complete genome78.7561 %Subject ←→ Query30.4034
NC_007954:334795Shewanella denitrificans OS217, complete genome76.3787 %Subject ←→ Query30.4254
NC_010334:3040589Shewanella halifaxensis HAW-EB4, complete genome75.1746 %Subject ←→ Query30.4925
NC_003910:4234000Colwellia psychrerythraea 34H, complete genome75.8701 %Subject ←→ Query30.5236
NC_008345:2717945Shewanella frigidimarina NCIMB 400, complete genome75.576 %Subject ←→ Query30.5387
NC_009052:1211989*Shewanella baltica OS155, complete genome75.5729 %Subject ←→ Query30.5674
NC_010634:1809500Yersinia pseudotuberculosis PB1/+, complete genome76.4583 %Subject ←→ Query30.5822
NC_010159:809663Yersinia pestis Angola, complete genome75.3922 %Subject ←→ Query30.5995
NC_009997:2635025Shewanella baltica OS195, complete genome75.7108 %Subject ←→ Query30.6571
NC_010506:3585533Shewanella woodyi ATCC 51908, complete genome76.3266 %Subject ←→ Query30.7231
NC_012968:507988*Methylotenera mobilis JLW8, complete genome76.8597 %Subject ←→ Query30.7369
NC_004347:2668000*Shewanella oneidensis MR-1, complete genome77.1906 %Subject ←→ Query30.8998
NC_006155:1807902Yersinia pseudotuberculosis IP 32953, complete genome75.7077 %Subject ←→ Query30.987
NC_008577:4533574Shewanella sp. ANA-3 chromosome 1, complete sequence77.6899 %Subject ←→ Query31.253
NC_004347:4541742Shewanella oneidensis MR-1, complete genome81.8689 %Subject ←→ Query31.2642
NC_008149:2773139Yersinia pestis Nepal516, complete genome76.5901 %Subject ←→ Query31.5189
NC_008577:1015419Shewanella sp. ANA-3 chromosome 1, complete sequence82.1354 %Subject ←→ Query31.5905
NC_010995:4117963Cellvibrio japonicus Ueda107, complete genome75.4994 %Subject ←→ Query31.6516
NC_015581:1891409*Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome76.2623 %Subject ←→ Query31.6938
NC_009052:2107692Shewanella baltica OS155, complete genome79.8315 %Subject ←→ Query31.778
NC_009901:2915939*Shewanella pealeana ATCC 700345, complete genome76.1949 %Subject ←→ Query31.8276
NC_008322:3585601*Shewanella sp. MR-7, complete genome77.693 %Subject ←→ Query32.0176
NC_008577:3738758*Shewanella sp. ANA-3 chromosome 1, complete sequence75.4351 %Subject ←→ Query32.1574
NC_008577:1579950Shewanella sp. ANA-3 chromosome 1, complete sequence76.3817 %Subject ←→ Query32.2252
NC_004347:4007847Shewanella oneidensis MR-1, complete genome80.1164 %Subject ←→ Query32.3067
NC_008577:1885809*Shewanella sp. ANA-3 chromosome 1, complete sequence76.5257 %Subject ←→ Query32.5693
NC_005810:1520000Yersinia pestis biovar Microtus str. 91001, complete genome77.3192 %Subject ←→ Query32.6435
NC_015633:461143Vibrio anguillarum 775 chromosome chromosome I, complete sequence75.576 %Subject ←→ Query32.6547
NC_008322:2716676Shewanella sp. MR-7, complete genome76.204 %Subject ←→ Query32.7019
NC_015581:1791658*Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome75.1042 %Subject ←→ Query32.7922
NC_008577:2115440*Shewanella sp. ANA-3 chromosome 1, complete sequence76.924 %Subject ←→ Query32.8405
NC_008321:2649781Shewanella sp. MR-4, complete genome75.6618 %Subject ←→ Query32.9025
NC_008150:905000Yersinia pestis Antiqua, complete genome77.3376 %Subject ←→ Query33.3319
NC_015581:680460Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome75.0214 %Subject ←→ Query33.4619
NC_008322:1898000*Shewanella sp. MR-7, complete genome79.4792 %Subject ←→ Query33.767
NC_009831:4447919Shewanella sediminis HAW-EB3, complete genome75.0858 %Subject ←→ Query34.1979
NC_009831:1539159*Shewanella sediminis HAW-EB3, complete genome76.9026 %Subject ←→ Query34.3628
NC_008321:1523323*Shewanella sp. MR-4, complete genome80.7016 %Subject ←→ Query34.601
NC_008321:3815940*Shewanella sp. MR-4, complete genome75.9069 %Subject ←→ Query34.6739
NC_009654:304000Marinomonas sp. MWYL1, complete genome78.3854 %Subject ←→ Query34.9258
NC_002506:822401Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete78.5478 %Subject ←→ Query34.9693
NC_008321:1993541*Shewanella sp. MR-4, complete genome79.0502 %Subject ←→ Query34.9743
NC_015224:1703130Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,77.5766 %Subject ←→ Query34.9769
NC_008577:2604281Shewanella sp. ANA-3 chromosome 1, complete sequence76.1581 %Subject ←→ Query34.9877
NC_008322:2983951Shewanella sp. MR-7, complete genome78.9154 %Subject ←→ Query35.0073
NC_015224:3225000*Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.9651 %Subject ←→ Query35.2572
NC_006371:1997954*Photobacterium profundum SS9 chromosome 2, complete sequence75.0521 %Subject ←→ Query35.2715
NC_008577:3125675Shewanella sp. ANA-3 chromosome 1, complete sequence78.511 %Subject ←→ Query35.5215
NC_015224:1391088Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,77.3254 %Subject ←→ Query36.0736
NC_004547:3207776*Erwinia carotovora subsp. atroseptica SCRI1043, complete genome76.1428 %Subject ←→ Query36.2193
NC_015224:3587500Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,76.7586 %Subject ←→ Query36.7592
NC_015224:1763848Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,76.4124 %Subject ←→ Query37.1095
NC_015224:3820338Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.2175 %Subject ←→ Query37.1577
NC_008322:1595500*Shewanella sp. MR-7, complete genome76.0202 %Subject ←→ Query37.3246
NC_012997:4545875Teredinibacter turnerae T7901, complete genome75.1746 %Subject ←→ Query37.5301
NC_012997:4026000Teredinibacter turnerae T7901, complete genome77.2028 %Subject ←→ Query38.2165
NC_015224:1067390Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.2819 %Subject ←→ Query38.2547
NC_015572:1252000Methylomonas methanica MC09 chromosome, complete genome75.6464 %Subject ←→ Query38.7541
NC_010634:4463727Yersinia pseudotuberculosis PB1/+, complete genome75.3738 %Subject ←→ Query38.8379
NC_002505:238569Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete76.9301 %Subject ←→ Query39.3701
NC_015567:1660462Serratia sp. AS9 chromosome, complete genome75.5331 %Subject Query42.6158
NC_015566:1659288Serratia sp. AS12 chromosome, complete genome75.1593 %Subject Query44.7005
NC_009832:1719149Serratia proteamaculans 568, complete genome75.098 %Subject Query48.0067
NC_008700:2701500*Shewanella amazonensis SB2B, complete genome75.5576 %Subject Query49.9286