Pre_GI: OUP Neighbours

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Query: NC_004347:103967 Shewanella oneidensis MR-1, complete genome

D: 28.505

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.

Number of Neighbours: 14




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_008577:1690946*Shewanella sp. ANA-3 chromosome 1, complete sequence79.0104 %Subject ←→ Query34.9418
NC_008322:641197*Shewanella sp. MR-7, complete genome77.9136 %Subject ←→ Query29.3288
NC_008577:613958Shewanella sp. ANA-3 chromosome 1, complete sequence77.8401 %Subject ←→ Query31.9005
NC_008321:1636148*Shewanella sp. MR-4, complete genome77.212 %Subject ←→ Query33.2895
NC_004347:4211241*Shewanella oneidensis MR-1, complete genome76.8689 %Subject ←→ Query26.7814
NC_008321:3964414Shewanella sp. MR-4, complete genome76.7739 %Subject ←→ Query36.1551
NC_008700:1115436*Shewanella amazonensis SB2B, complete genome76.0846 %Subject ←→ Query36.6166
NC_008322:1708631*Shewanella sp. MR-7, complete genome76.0692 %Subject ←→ Query33.7062
NC_008577:2910383*Shewanella sp. ANA-3 chromosome 1, complete sequence76.0202 %Subject ←→ Query31.1953
NC_008321:3189974Shewanella sp. MR-4, complete genome75.6587 %Subject ←→ Query29.9459
NC_009052:3229775Shewanella baltica OS155, complete genome75.1869 %Subject ←→ Query27.5596
NC_008321:3232000Shewanella sp. MR-4, complete genome75.1256 %Subject ←→ Query30.7332
NC_009654:4716417Marinomonas sp. MWYL1, complete genome75.1226 %Subject ←→ Query32.6103
NC_008321:458811Shewanella sp. MR-4, complete genome75.046 %Subject ←→ Query31.5836