Pre_GI: OUP Neighbours

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Query: NC_004307:1108325 Bifidobacterium longum NCC2705, complete genome

D: 31.6663

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from infant feces. Normal human gut flora. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.

Number of Neighbours: 20




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_010816:1852406Bifidobacterium longum DJO10A, complete genome78.0453 %Subject ←→ Query23.1548
NC_008009:4479648Acidobacteria bacterium Ellin345, complete genome75.1072 %Subject ←→ Query25.2371
NC_007761:781210*Rhizobium etli CFN 42, complete genome76.4246 %Subject ←→ Query28.9946
NC_014098:1553900*Bacillus tusciae DSM 2912 chromosome, complete genome75.4779 %Subject ←→ Query30.8579
NC_015731:25493*Nitrosomonas sp. Is79A3 chromosome, complete genome75.8548 %Subject ←→ Query31.2014
NC_009667:1934818Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence76.4093 %Subject ←→ Query31.3936
NC_012814:1599241Bifidobacterium animalis subsp. lactis Bl-04, complete genome77.9259 %Subject ←→ Query32.3379
NC_012815:1603916Bifidobacterium animalis subsp. lactis DSM 10140, complete genome77.5031 %Subject ←→ Query32.4976
NC_014218:253558*Arcanobacterium haemolyticum DSM 20595 chromosome, complete genome77.4847 %Subject ←→ Query32.6331
NC_011987:53760Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence75.0306 %Subject ←→ Query33.1909
NC_002932:937157Chlorobium tepidum TLS, complete genome76.2316 %Subject ←→ Query33.2928
NC_011027:136954*Chlorobaculum parvum NCIB 8327, complete genome75.3064 %Subject ←→ Query33.2989
NC_010529:296500Cupriavidus taiwanensis plasmid pRALTA, complete sequence76.1397 %Subject ←→ Query33.7969
NC_015738:838715*Eggerthella sp. YY7918, complete genome75.5699 %Subject ←→ Query36.3913
NC_013205:1548500*Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,77.3254 %Subject ←→ Query39.0007
NC_013173:2261396*Desulfomicrobium baculatum DSM 4028, complete genome75.8517 %Subject ←→ Query40.3898
NC_009667:1371924*Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence75.2359 %Subject Query42.1148
NC_011027:303000*Chlorobaculum parvum NCIB 8327, complete genome75.5576 %Subject Query47.9407
NC_014483:4532000*Paenibacillus polymyxa E681 chromosome, complete genome75.6955 %Subject Query48.1165
NC_013714:2294342Bifidobacterium dentium Bd1, complete genome77.2304 %Subject Query48.7653