Pre_GI: OUP Neighbours

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Query: NC_003552:3092456 Methanosarcina acetivorans C2A, complete genome

D: 38.0267

Host Lineage: Methanosarcina acetivorans; Methanosarcina; Methanosarcinaceae; Methanosarcinales; Euryarchaeota; Archaea

General Information: This wild-type strain (C2A; DSM2834) is the type strain of this species and was isolated from marine sediment. Anaerobic methane-producing archeon. This organism is a strictly anaerobic, nonmotile, methane-producing Archaea responsible for virtually all biogenic methane production, a process of critical importance as a key step in the global carbon cycle. This process results in the production of significant amounts of greenhouse gas. This organism is also important in production of alternative fuels and plays a role in both agricultural and waste treatment industry. Optimal growth occurs at pH 6.5-7.0.

Number of Neighbours: 28

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_003901:1177056*Methanosarcina mazei Go1, complete genome77.6011 %Subject Query24.4832
NC_014002:1408085*Methanohalophilus mahii DSM 5219 chromosome, complete genome75.4749 %Subject Query25.6323
NC_014002:403180*Methanohalophilus mahii DSM 5219 chromosome, complete genome75.0153 %Subject Query26.4135
NC_003901:3750000Methanosarcina mazei Go1, complete genome77.4847 %Subject ←→ Query28.0581
NC_003901:3591500Methanosarcina mazei Go1, complete genome75.6189 %Subject ←→ Query29.0451
NC_003901:2727361Methanosarcina mazei Go1, complete genome79.7947 %Subject ←→ Query29.3128
NC_003552:5402000Methanosarcina acetivorans C2A, complete genome75.337 %Subject ←→ Query29.4257
NC_012108:4417483Desulfobacterium autotrophicum HRM2, complete genome75.9069 %Subject ←→ Query30.3758
NC_003901:3698164Methanosarcina mazei Go1, complete genome81.5472 %Subject ←→ Query30.9202
NC_003901:860242Methanosarcina mazei Go1, complete genome80.1777 %Subject ←→ Query31.1817
NC_007759:964000*Syntrophus aciditrophicus SB, complete genome75.337 %Subject ←→ Query31.2296
NC_003552:4782635Methanosarcina acetivorans C2A, complete genome76.5441 %Subject ←→ Query32.5138
NC_003901:815389Methanosarcina mazei Go1, complete genome76.7524 %Subject ←→ Query32.7812
NC_012108:2194251Desulfobacterium autotrophicum HRM2, complete genome75.2941 %Subject ←→ Query33.3119
NC_011830:2901346Desulfitobacterium hafniense DCB-2, complete genome76.0355 %Subject ←→ Query33.6819
NC_011830:3025437*Desulfitobacterium hafniense DCB-2, complete genome77.5 %Subject ←→ Query33.8394
NC_003552:1008475Methanosarcina acetivorans C2A, complete genome78.076 %Subject ←→ Query34.1205
NC_011830:2177187Desulfitobacterium hafniense DCB-2, complete genome76.0601 %Subject ←→ Query35.1804
NC_007907:1940000Desulfitobacterium hafniense Y51, complete genome77.0251 %Subject ←→ Query35.3885
NC_015732:2057895Spirochaeta caldaria DSM 7334 chromosome, complete genome75.4688 %Subject ←→ Query35.4146
NC_003552:1202909Methanosarcina acetivorans C2A, complete genome75.2359 %Subject ←→ Query35.8329
NC_003552:3269000Methanosarcina acetivorans C2A, complete genome83.1648 %Subject ←→ Query36.9331
NC_014220:1162948Syntrophothermus lipocalidus DSM 12680 chromosome, complete genome75.3493 %Subject ←→ Query37.8629
NC_014364:894373*Spirochaeta smaragdinae DSM 11293 chromosome, complete genome75.3156 %Subject ←→ Query38.0711
NC_013740:1178370Acidaminococcus fermentans DSM 20731, complete genome76.6667 %Subject ←→ Query39.7688
NC_011768:5900500*Desulfatibacillum alkenivorans AK-01, complete genome75.3033 %Subject ←→ Query41.351
NC_013740:842841*Acidaminococcus fermentans DSM 20731, complete genome75.0582 %Subject ←→ Query44.7435
NC_013222:817686*Robiginitalea biformata HTCC2501, complete genome75.3952 %Subject Query49.7242