Pre_GI: OUP Neighbours

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Query: NC_003210:721824 Listeria monocytogenes EGD-e, complete genome

D: 22.1346

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain has numerous pathogenicity islands and genes as compared to the related non-pathogenic organism Listeria innocua. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor". There are 13 serovars associated with Listeria monocytogenes, and the serovar 4b strains are more commonly associated with invasive disease.

Number of Neighbours: 17




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_010939:2085000*Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete75.6281 %Subject ←→ Query26.8349
NC_004668:3118500Enterococcus faecalis V583, complete genome76.0662 %Subject ←→ Query28.4525
NC_004668:191732*Enterococcus faecalis V583, complete genome75.144 %Subject ←→ Query23.4497
NC_015460:1687684*Gallibacterium anatis UMN179 chromosome, complete genome76.201 %Subject Query33.257
NC_012793:3035978Geobacillus sp. WCH70, complete genome76.5809 %Subject ←→ Query27.2556
NC_002973:1846000*Listeria monocytogenes str. 4b F2365, complete genome83.2077 %Subject ←→ Query20.0663
NC_002973:730942Listeria monocytogenes str. 4b F2365, complete genome92.4908 %Subject ←→ Query22.6302
NC_015276:2023663Marinomonas mediterranea MMB-1 chromosome, complete genome75.3309 %Subject Query34.0303
NC_008525:108687*Pediococcus pentosaceus ATCC 25745, complete genome78.4467 %Subject ←→ Query30.0765
NC_015277:4269399Sphingobacterium sp. 21 chromosome, complete genome79.1973 %Subject ←→ Query26.7631
NC_002951:1474465Staphylococcus aureus subsp. aureus COL, complete genome76.0631 %Subject ←→ Query29.1376
NC_002952:1497785Staphylococcus aureus subsp. aureus MRSA252, complete genome76.8536 %Subject ←→ Query29.2682
NC_009782:1510396Staphylococcus aureus subsp. aureus Mu3, complete genome75.8854 %Subject ←→ Query29.4968
NC_002758:1508996Staphylococcus aureus subsp. aureus Mu50, complete genome75.8946 %Subject ←→ Query28.8616
NC_002745:1432585Staphylococcus aureus subsp. aureus N315, complete genome75.8027 %Subject ←→ Query29.4273
NC_007793:1451409Staphylococcus aureus subsp. aureus USA300, complete genome75.9835 %Subject ←→ Query28.476
NC_004603:1464000Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete76.2868 %Subject ←→ Query31.3716