Pre_GI: OUP Neighbours

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Query: NC_002950:209569 Porphyromonas gingivalis W83, complete genome

D: 30.2934

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This strain (also known as HG66) is virulent in a mouse model and has been extensively studied. It was originally isolated by H. Werner in the 1950s in Bonn, Germany, from an unknown human infection. Associated with severe and chronic periodontal disease. This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin.Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.

Number of Neighbours: 160




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_014364:394899Spirochaeta smaragdinae DSM 11293 chromosome, complete genome79.424 %Subject Query44.1589
NC_015571:411156Porphyromonas gingivalis TDC60, complete genome79.2555 %Subject ←→ Query32.6171
NC_011830:4722607Desulfitobacterium hafniense DCB-2, complete genome79.1575 %Subject ←→ Query35.7585
NC_012491:743883*Brevibacillus brevis NBRC 100599, complete genome78.7469 %Subject ←→ Query35.5725
NC_014551:2510000*Bacillus amyloliquefaciens DSM 7, complete genome78.318 %Subject ←→ Query33.5634
NC_015160:2239933*Odoribacter splanchnicus DSM 20712 chromosome, complete genome78.03 %Subject ←→ Query30.6001
NC_015571:2002489*Porphyromonas gingivalis TDC60, complete genome78.0024 %Subject ←→ Query31.3475
NC_015160:2145915Odoribacter splanchnicus DSM 20712 chromosome, complete genome77.8064 %Subject ←→ Query28.8608
NC_014824:366000Ruminococcus albus 7 plasmid pRUMAL01, complete sequence77.6869 %Subject ←→ Query27.0575
NC_011060:1898224Pelodictyon phaeoclathratiforme BU-1, complete genome77.6226 %Subject ←→ Query39.6782
NC_015160:1697125*Odoribacter splanchnicus DSM 20712 chromosome, complete genome77.546 %Subject ←→ Query28.5749
NC_015160:797780*Odoribacter splanchnicus DSM 20712 chromosome, complete genome77.5276 %Subject ←→ Query30.8261
NC_008528:610070*Oenococcus oeni PSU-1, complete genome77.5245 %Subject ←→ Query29.6233
NC_015160:3996764*Odoribacter splanchnicus DSM 20712 chromosome, complete genome77.5031 %Subject ←→ Query28.7451
NC_014364:4578408Spirochaeta smaragdinae DSM 11293 chromosome, complete genome77.4755 %Subject ←→ Query34.4426
NC_012785:638000Kosmotoga olearia TBF 19.5.1, complete genome77.4724 %Subject ←→ Query25.4803
NC_010729:1014957Porphyromonas gingivalis ATCC 33277, complete genome77.4387 %Subject ←→ Query30.0401
NC_013406:1217385Paenibacillus sp. Y412MC10 chromosome, complete genome77.4081 %Subject Query40.6606
NC_015737:831792Clostridium sp. SY8519, complete genome77.3836 %Subject ←→ Query30.2286
NC_015164:2473496*Bacteroides salanitronis DSM 18170 chromosome, complete genome77.3499 %Subject ←→ Query38.3493
NC_006322:4149500*Bacillus licheniformis ATCC 14580, complete genome77.3162 %Subject ←→ Query38.2051
NC_014734:183214*Paludibacter propionicigenes WB4 chromosome, complete genome77.2059 %Subject ←→ Query28.2452
NC_014376:1217000Clostridium saccharolyticum WM1 chromosome, complete genome77.1936 %Subject ←→ Query29.7766
NC_008510:1339926Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,77.1324 %Subject Query17.8979
NC_011060:1538375Pelodictyon phaeoclathratiforme BU-1, complete genome77.114 %Subject ←→ Query33.6941
NC_015634:359500*Bacillus coagulans 2-6 chromosome, complete genome77.0588 %Subject ←→ Query37.1292
NC_007907:3722500Desulfitobacterium hafniense Y51, complete genome76.9945 %Subject ←→ Query38.1854
NC_015660:3518931Geobacillus thermoglucosidasius C56-YS93 chromosome, complete76.9884 %Subject ←→ Query29.0471
NC_014376:2964731*Clostridium saccharolyticum WM1 chromosome, complete genome76.9332 %Subject ←→ Query33.5289
NC_014364:2246524*Spirochaeta smaragdinae DSM 11293 chromosome, complete genome76.8597 %Subject ←→ Query37.5351
NC_015977:2920500Roseburia hominis A2-183 chromosome, complete genome76.8413 %Subject ←→ Query37.7098
NC_013895:1332832Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete76.8137 %Subject ←→ Query31.2164
NC_015660:3328595Geobacillus thermoglucosidasius C56-YS93 chromosome, complete76.8045 %Subject ←→ Query28.0701
NC_015660:296488Geobacillus thermoglucosidasius C56-YS93 chromosome, complete76.78 %Subject ←→ Query31.3239
NC_015975:558523*Lactobacillus ruminis ATCC 27782 chromosome, complete genome76.7524 %Subject ←→ Query28.1514
NC_014976:627935Bacillus subtilis BSn5 chromosome, complete genome76.7249 %Subject ←→ Query29.5132
NC_016047:3406488Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete76.7157 %Subject ←→ Query29.3318
NC_007907:5185510Desulfitobacterium hafniense Y51, complete genome76.6789 %Subject ←→ Query34.7666
NC_014364:667841Spirochaeta smaragdinae DSM 11293 chromosome, complete genome76.6789 %Subject ←→ Query36.4759
NC_012793:3096095Geobacillus sp. WCH70, complete genome76.6605 %Subject ←→ Query29.7031
NC_010831:2078329*Chlorobium phaeobacteroides BS1, complete genome76.6391 %Subject ←→ Query39.1588
NC_013406:3583474Paenibacillus sp. Y412MC10 chromosome, complete genome76.636 %Subject Query42.5396
NC_014219:192555Bacillus selenitireducens MLS10 chromosome, complete genome76.5349 %Subject ←→ Query33.4495
NC_016047:4108910Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete76.5074 %Subject ←→ Query32.807
NC_015634:2595500Bacillus coagulans 2-6 chromosome, complete genome76.489 %Subject ←→ Query35.9909
NC_008508:1382036Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1,76.4583 %Subject Query17.8569
NC_014551:1872000Bacillus amyloliquefaciens DSM 7, complete genome76.4553 %Subject ←→ Query32.1659
NC_012491:5628000Brevibacillus brevis NBRC 100599, complete genome76.4522 %Subject ←→ Query33.6173
NC_003909:386880*Bacillus cereus ATCC 10987, complete genome76.4369 %Subject ←→ Query22.1729
NC_014219:2284000Bacillus selenitireducens MLS10 chromosome, complete genome76.4308 %Subject ←→ Query31.7181
NC_012778:1573847Eubacterium eligens ATCC 27750, complete genome76.4216 %Subject ←→ Query26.9631
NC_002950:1511955*Porphyromonas gingivalis W83, complete genome76.4185 %Subject ←→ Query33.0544
NC_015152:2549756*Spirochaeta sp. Buddy chromosome, complete genome76.3787 %Subject ←→ Query32.9075
NC_016023:2163000*Bacillus coagulans 36D1 chromosome, complete genome76.3787 %Subject ←→ Query34.5001
NC_006347:5027580Bacteroides fragilis YCH46, complete genome76.3726 %Subject ←→ Query32.0586
NC_012491:4231469*Brevibacillus brevis NBRC 100599, complete genome76.3726 %Subject ←→ Query33.0435
NC_004663:4977635*Bacteroides thetaiotaomicron VPI-5482, complete genome76.3542 %Subject ←→ Query33.2138
NC_002967:552000Treponema denticola ATCC 35405, complete genome76.3419 %Subject ←→ Query21.5467
NC_014376:3009403Clostridium saccharolyticum WM1 chromosome, complete genome76.299 %Subject ←→ Query30.7125
NC_014976:2420000Bacillus subtilis BSn5 chromosome, complete genome76.2898 %Subject ←→ Query33.5606
NC_013895:117429*Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete76.2347 %Subject ←→ Query30.5843
NC_010729:1179008*Porphyromonas gingivalis ATCC 33277, complete genome76.2071 %Subject ←→ Query34.8701
NC_014976:1671594Bacillus subtilis BSn5 chromosome, complete genome76.1673 %Subject ←→ Query28.2861
NC_014479:3245126Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete76.1673 %Subject ←→ Query29.3642
NC_009662:837500*Nitratiruptor sp. SB155-2, complete genome76.1397 %Subject ←→ Query25.1207
NC_014483:4740214*Paenibacillus polymyxa E681 chromosome, complete genome76.1121 %Subject ←→ Query31.554
NC_015160:1055220Odoribacter splanchnicus DSM 20712 chromosome, complete genome76.1029 %Subject ←→ Query31.1607
NC_014479:188009Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete76.1029 %Subject ←→ Query28.4703
NC_015975:99500Lactobacillus ruminis ATCC 27782 chromosome, complete genome76.0631 %Subject ←→ Query25.8512
NC_016023:1959255Bacillus coagulans 36D1 chromosome, complete genome76.0539 %Subject ←→ Query31.4721
NC_014976:2735423*Bacillus subtilis BSn5 chromosome, complete genome76.0478 %Subject ←→ Query33.0378
NC_015975:1593797Lactobacillus ruminis ATCC 27782 chromosome, complete genome76.0417 %Subject ←→ Query26.9455
NC_015172:1621223Syntrophobotulus glycolicus DSM 8271 chromosome, complete genome76.0355 %Subject ←→ Query32.773
NC_015660:487506Geobacillus thermoglucosidasius C56-YS93 chromosome, complete76.0294 %Subject ←→ Query27.583
NC_015152:272500Spirochaeta sp. Buddy chromosome, complete genome76.0294 %Subject ←→ Query28.3895
NC_000964:3658000Bacillus subtilis subsp. subtilis str. 168, complete genome76.0233 %Subject ←→ Query30.7728
NC_015164:325212*Bacteroides salanitronis DSM 18170 chromosome, complete genome76.0141 %Subject ←→ Query36.6265
NC_015164:63590*Bacteroides salanitronis DSM 18170 chromosome, complete genome75.9406 %Subject ←→ Query36.3296
NC_014551:483773*Bacillus amyloliquefaciens DSM 7, complete genome75.9344 %Subject ←→ Query32.1933
NC_014364:2322269*Spirochaeta smaragdinae DSM 11293 chromosome, complete genome75.9038 %Subject ←→ Query39.7692
NC_014219:3254268*Bacillus selenitireducens MLS10 chromosome, complete genome75.9007 %Subject Query44.161
NC_013895:1086500*Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete75.864 %Subject ←→ Query28.8667
NC_009725:496443*Bacillus amyloliquefaciens FZB42, complete genome75.8517 %Subject ←→ Query35.4002
NC_015660:3643370Geobacillus thermoglucosidasius C56-YS93 chromosome, complete75.8241 %Subject ←→ Query25.9515
NC_015164:1952500Bacteroides salanitronis DSM 18170 chromosome, complete genome75.8211 %Subject ←→ Query37.3063
NC_016047:345491Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete75.8119 %Subject ←→ Query28.4594
NC_014551:3864127Bacillus amyloliquefaciens DSM 7, complete genome75.8088 %Subject ←→ Query35.3295
NC_006322:1119471Bacillus licheniformis ATCC 14580, complete genome75.8027 %Subject ←→ Query36.4447
NC_015977:3215770*Roseburia hominis A2-183 chromosome, complete genome75.7996 %Subject Query41.94
NC_008528:1265542*Oenococcus oeni PSU-1, complete genome75.7966 %Subject ←→ Query30.4449
NC_012914:5446366Paenibacillus sp. JDR-2, complete genome75.7935 %Subject ←→ Query31.0342
NC_009828:469778*Thermotoga lettingae TMO, complete genome75.7874 %Subject ←→ Query21.6939
NC_014479:3452484Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete75.7782 %Subject ←→ Query32.4894
NC_014976:17909Bacillus subtilis BSn5 chromosome, complete genome75.7659 %Subject ←→ Query28.3033
NC_000964:521975*Bacillus subtilis subsp. subtilis str. 168, complete genome75.7506 %Subject ←→ Query30.7275
NC_000964:4164683Bacillus subtilis subsp. subtilis str. 168, complete genome75.7353 %Subject ←→ Query30.1174
NC_014734:1428282*Paludibacter propionicigenes WB4 chromosome, complete genome75.6863 %Subject ←→ Query26.5789
NC_013062:1141865Flavobacteriaceae bacterium 3519-10, complete genome75.6863 %Subject ←→ Query24.786
NC_002950:879930*Porphyromonas gingivalis W83, complete genome75.6679 %Subject ←→ Query34.5736
NC_012914:5618000Paenibacillus sp. JDR-2, complete genome75.6679 %Subject ←→ Query39.6612
NC_014483:5015890Paenibacillus polymyxa E681 chromosome, complete genome75.6587 %Subject ←→ Query33.3818
NC_013731:11605*Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequence75.6526 %Subject Query43.3836
NC_014479:509919*Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete75.6464 %Subject ←→ Query29.9932
NC_013895:1203000Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete75.6373 %Subject ←→ Query29.5055
NC_015177:124000Pedobacter saltans DSM 12145 chromosome, complete genome75.625 %Subject ←→ Query22.3918
NC_014479:3939183*Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete75.6219 %Subject ←→ Query32.3217
NC_013132:7954000*Chitinophaga pinensis DSM 2588, complete genome75.6189 %Subject ←→ Query31.7994
NC_015977:2874000*Roseburia hominis A2-183 chromosome, complete genome75.6127 %Subject Query42.5037
NC_010729:619664*Porphyromonas gingivalis ATCC 33277, complete genome75.6005 %Subject ←→ Query35.2723
NC_013061:4712051Pedobacter heparinus DSM 2366, complete genome75.5913 %Subject ←→ Query23.6685
NC_012914:5225609*Paenibacillus sp. JDR-2, complete genome75.5852 %Subject Query44.0437
NC_016047:3632489Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete75.5821 %Subject ←→ Query34.0296
NC_015164:3210885Bacteroides salanitronis DSM 18170 chromosome, complete genome75.5729 %Subject ←→ Query38.0101
NC_015160:3556114Odoribacter splanchnicus DSM 20712 chromosome, complete genome75.5239 %Subject ←→ Query28.9062
NC_015144:1526669*Weeksella virosa DSM 16922 chromosome, complete genome75.5239 %Subject Query17.1601
NC_011898:3367457*Clostridium cellulolyticum H10, complete genome75.5055 %Subject ←→ Query27.3966
NC_014033:1215790*Prevotella ruminicola 23 chromosome, complete genome75.4994 %Subject Query41.0444
NC_015707:1394227Thermotoga thermarum DSM 5069 chromosome, complete genome75.4749 %Subject ←→ Query26.7996
NC_015164:3659000Bacteroides salanitronis DSM 18170 chromosome, complete genome75.4626 %Subject ←→ Query36.9763
NC_015144:693958*Weeksella virosa DSM 16922 chromosome, complete genome75.4289 %Subject Query17.38
NC_011830:1037520Desulfitobacterium hafniense DCB-2, complete genome75.4167 %Subject ←→ Query34.1988
NC_009663:89224*Sulfurovum sp. NBC37-1, complete genome75.4136 %Subject ←→ Query29.2011
NC_014734:2285762*Paludibacter propionicigenes WB4 chromosome, complete genome75.3738 %Subject ←→ Query27.5515
NC_016047:1978312Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete75.3431 %Subject ←→ Query29.87
NC_012881:1802000*Desulfovibrio salexigens DSM 2638, complete genome75.3401 %Subject ←→ Query30.7507
NC_011026:2533017*Chloroherpeton thalassium ATCC 35110, complete genome75.3248 %Subject ←→ Query31.9226
NC_015164:4023881Bacteroides salanitronis DSM 18170 chromosome, complete genome75.2941 %Subject ←→ Query35.2444
NC_011830:720756Desulfitobacterium hafniense DCB-2, complete genome75.2911 %Subject ←→ Query30.4292
NC_014824:263491Ruminococcus albus 7 plasmid pRUMAL01, complete sequence75.288 %Subject ←→ Query24.7021
NC_006322:3418268Bacillus licheniformis ATCC 14580, complete genome75.2604 %Subject ←→ Query34.2705
NC_009828:1474970Thermotoga lettingae TMO, complete genome75.242 %Subject ←→ Query21.7777
NC_000964:1873398Bacillus subtilis subsp. subtilis str. 168, complete genome75.2328 %Subject ←→ Query31.6844
NC_015975:1056731*Lactobacillus ruminis ATCC 27782 chromosome, complete genome75.2083 %Subject ←→ Query34.5635
NC_008571:2229369Gramella forsetii KT0803, complete genome75.1777 %Subject ←→ Query21.8628
NC_009012:2100000*Clostridium thermocellum ATCC 27405, complete genome75.1685 %Subject ←→ Query27.4471
NC_015660:3174424Geobacillus thermoglucosidasius C56-YS93 chromosome, complete75.1593 %Subject ←→ Query27.2809
NC_009012:574145Clostridium thermocellum ATCC 27405, complete genome75.1562 %Subject ←→ Query28.2831
NC_014479:2505823Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete75.1532 %Subject ←→ Query30.2196
NC_015958:2174731Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome75.1501 %Subject ←→ Query25.6478
NC_015672:788417*Flexistipes sinusarabici DSM 4947 chromosome, complete genome75.1379 %Subject ←→ Query32.9442
NC_015311:403281*Prevotella denticola F0289 chromosome, complete genome75.1348 %Subject Query48.0161
NC_003552:661579*Methanosarcina acetivorans C2A, complete genome75.1317 %Subject ←→ Query30.1344
NC_014033:2410331Prevotella ruminicola 23 chromosome, complete genome75.1072 %Subject Query41.2236
NC_014033:1088500Prevotella ruminicola 23 chromosome, complete genome75.1011 %Subject Query42.9348
NC_014479:1831404Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete75.098 %Subject ←→ Query29.5706
NC_009009:1792317*Streptococcus sanguinis SK36, complete genome75.095 %Subject ←→ Query28.3209
NC_009012:2356500Clostridium thermocellum ATCC 27405, complete genome75.0705 %Subject ←→ Query27.9669
NC_015177:4478986Pedobacter saltans DSM 12145 chromosome, complete genome75.0705 %Subject ←→ Query21.9601
NC_012491:4987280*Brevibacillus brevis NBRC 100599, complete genome75.0674 %Subject ←→ Query33.843
NC_009663:1656804Sulfurovum sp. NBC37-1, complete genome75.0643 %Subject ←→ Query30.152
NC_014976:759129Bacillus subtilis BSn5 chromosome, complete genome75.0613 %Subject ←→ Query35.2757
NC_015737:1976000Clostridium sp. SY8519, complete genome75.0582 %Subject ←→ Query33.2382
NC_015975:752927*Lactobacillus ruminis ATCC 27782 chromosome, complete genome75.0398 %Subject ←→ Query30.478
NC_013061:1856969*Pedobacter heparinus DSM 2366, complete genome75.0306 %Subject ←→ Query24.4802
NC_009848:582775Bacillus pumilus SAFR-032, complete genome75.0276 %Subject ←→ Query27.3375
NC_016047:3599095Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete75.0245 %Subject ←→ Query32.4227
NC_011830:1288984Desulfitobacterium hafniense DCB-2, complete genome75.0092 %Subject ←→ Query36.5143
NC_013895:1282566*Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete75.0092 %Subject ←→ Query28.6033
NC_008571:185000Gramella forsetii KT0803, complete genome75.0092 %Subject Query19.7425
NC_016047:2150000Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete75.0092 %Subject ←→ Query30.6113