Pre_GI: OUP Neighbours

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Query: NC_002950:1571383 Porphyromonas gingivalis W83, complete genome

D: 33.7002

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This strain (also known as HG66) is virulent in a mouse model and has been extensively studied. It was originally isolated by H. Werner in the 1950s in Bonn, Germany, from an unknown human infection. Associated with severe and chronic periodontal disease. This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin.Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.

Number of Neighbours: 141

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_014109:393500*Candidatus Riesia pediculicola USDA chromosome, complete genome75.9681 %Subject Query14.7682
NC_010003:1126800*Petrotoga mobilis SJ95, complete genome75.4871 %Subject Query17.1493
NC_015144:997587*Weeksella virosa DSM 16922 chromosome, complete genome75.4473 %Subject Query18.0022
NC_008510:2605500Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,77.3683 %Subject Query18.1033
NC_008508:2572450Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1,77.5031 %Subject Query18.8628
NC_014109:27500*Candidatus Riesia pediculicola USDA chromosome, complete genome75.5147 %Subject Query20.9099
NC_002967:2194829*Treponema denticola ATCC 35405, complete genome80.5913 %Subject Query21.2944
NC_008510:995612*Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,75.1961 %Subject Query21.3582
NC_002967:552000Treponema denticola ATCC 35405, complete genome78.3915 %Subject Query21.5467
NC_014824:263491Ruminococcus albus 7 plasmid pRUMAL01, complete sequence76.8413 %Subject ←→ Query24.7021
NC_015660:3643370Geobacillus thermoglucosidasius C56-YS93 chromosome, complete75.3922 %Subject ←→ Query25.9515
NC_007796:412000*Methanospirillum hungatei JF-1, complete genome75.2482 %Subject ←→ Query26.0139
NC_015144:47783Weeksella virosa DSM 16922 chromosome, complete genome75.2328 %Subject ←→ Query26.1478
NC_003552:1397311Methanosarcina acetivorans C2A, complete genome75.8364 %Subject ←→ Query26.7996
NC_003901:2862500Methanosarcina mazei Go1, complete genome75.4351 %Subject ←→ Query26.8763
NC_016023:915178Bacillus coagulans 36D1 chromosome, complete genome75.5668 %Subject ←→ Query27.1674
NC_007796:3379614*Methanospirillum hungatei JF-1, complete genome76.5135 %Subject ←→ Query27.2343
NC_015660:3174424Geobacillus thermoglucosidasius C56-YS93 chromosome, complete76.0754 %Subject ←→ Query27.2809
NC_015660:1076159Geobacillus thermoglucosidasius C56-YS93 chromosome, complete75.5086 %Subject ←→ Query27.3103
NC_015660:487506Geobacillus thermoglucosidasius C56-YS93 chromosome, complete78.0607 %Subject ←→ Query27.583
NC_012793:1718000Geobacillus sp. WCH70, complete genome75.9252 %Subject ←→ Query27.6873
NC_015660:3328595Geobacillus thermoglucosidasius C56-YS93 chromosome, complete77.0221 %Subject ←→ Query28.0701
NC_016023:1143130*Bacillus coagulans 36D1 chromosome, complete genome76.0692 %Subject ←→ Query28.1872
NC_014976:1671594Bacillus subtilis BSn5 chromosome, complete genome76.0355 %Subject ←→ Query28.2861
NC_012793:3275751*Geobacillus sp. WCH70, complete genome75.4749 %Subject ←→ Query28.4508
NC_002578:729632Thermoplasma acidophilum DSM 1728, complete genome77.0956 %Subject ←→ Query28.5587
NC_014976:2175667Bacillus subtilis BSn5 chromosome, complete genome75.7047 %Subject ←→ Query28.6114
NC_016047:2631511*Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete76.4124 %Subject ←→ Query28.7208
NC_015160:3996764*Odoribacter splanchnicus DSM 20712 chromosome, complete genome76.6483 %Subject ←→ Query28.7451
NC_002689:1548000*Thermoplasma volcanium GSS1, complete genome75.0061 %Subject ←→ Query28.8247
NC_003552:1816864Methanosarcina acetivorans C2A, complete genome75.5729 %Subject ←→ Query28.8383
NC_015160:2145915Odoribacter splanchnicus DSM 20712 chromosome, complete genome76.8658 %Subject ←→ Query28.8608
NC_015160:3556114Odoribacter splanchnicus DSM 20712 chromosome, complete genome78.4007 %Subject ←→ Query28.9062
NC_000964:4116104Bacillus subtilis subsp. subtilis str. 168, complete genome75.0643 %Subject ←→ Query28.9123
NC_014976:403919Bacillus subtilis BSn5 chromosome, complete genome75.2053 %Subject ←→ Query28.9721
NC_015160:2418317Odoribacter splanchnicus DSM 20712 chromosome, complete genome76.4308 %Subject ←→ Query29.0385
NC_015660:3518931Geobacillus thermoglucosidasius C56-YS93 chromosome, complete75.3064 %Subject ←→ Query29.0471
NC_015660:1918307*Geobacillus thermoglucosidasius C56-YS93 chromosome, complete79.3842 %Subject ←→ Query29.0695
NC_003552:1259356*Methanosarcina acetivorans C2A, complete genome75.6281 %Subject ←→ Query29.3142
NC_014479:3245126Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete76.0417 %Subject ←→ Query29.3642
NC_014479:2038348Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete75.0735 %Subject ←→ Query29.5197
NC_014479:1831404Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete76.0386 %Subject ←→ Query29.5706
NC_007796:3422000Methanospirillum hungatei JF-1, complete genome76.8107 %Subject ←→ Query29.5759
NC_007796:1731500Methanospirillum hungatei JF-1, complete genome77.5613 %Subject ←→ Query29.6421
NC_012793:3096095Geobacillus sp. WCH70, complete genome76.0692 %Subject ←→ Query29.7031
NC_016047:1978312Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete76.0631 %Subject ←→ Query29.87
NC_014479:509919*Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete75.4657 %Subject ←→ Query29.9932
NC_010729:1014957Porphyromonas gingivalis ATCC 33277, complete genome78.9308 %Subject ←→ Query30.0401
NC_003552:2634828Methanosarcina acetivorans C2A, complete genome77.307 %Subject ←→ Query30.0578
NC_000964:4164683Bacillus subtilis subsp. subtilis str. 168, complete genome75.4504 %Subject ←→ Query30.1174
NC_003552:661579*Methanosarcina acetivorans C2A, complete genome75.2145 %Subject ←→ Query30.1344
NC_003552:2502689*Methanosarcina acetivorans C2A, complete genome76.1244 %Subject ←→ Query30.1624
NC_014479:2505823Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete75.1808 %Subject ←→ Query30.2196
NC_014976:3469395*Bacillus subtilis BSn5 chromosome, complete genome75.4167 %Subject ←→ Query30.4023
NC_006322:1932847Bacillus licheniformis ATCC 14580, complete genome76.7739 %Subject ←→ Query30.5728
NC_015160:2239933*Odoribacter splanchnicus DSM 20712 chromosome, complete genome76.9914 %Subject ←→ Query30.6001
NC_015160:797780*Odoribacter splanchnicus DSM 20712 chromosome, complete genome77.2059 %Subject ←→ Query30.8261
NC_015571:1065775Porphyromonas gingivalis TDC60, complete genome80.6342 %Subject ←→ Query30.9847
NC_006322:1536426Bacillus licheniformis ATCC 14580, complete genome75.4779 %Subject ←→ Query31.0007
NC_015160:1055220Odoribacter splanchnicus DSM 20712 chromosome, complete genome79.5129 %Subject ←→ Query31.1607
NC_015571:2002489*Porphyromonas gingivalis TDC60, complete genome77.693 %Subject ←→ Query31.3475
NC_016023:267581Bacillus coagulans 36D1 chromosome, complete genome75.288 %Subject ←→ Query31.3655
NC_016023:1959255Bacillus coagulans 36D1 chromosome, complete genome75.2053 %Subject ←→ Query31.4721
NC_013216:3473119Desulfotomaculum acetoxidans DSM 771, complete genome75.8027 %Subject ←→ Query31.6148
NC_011830:4951716Desulfitobacterium hafniense DCB-2, complete genome75.2512 %Subject ←→ Query31.6622
NC_016023:579000*Bacillus coagulans 36D1 chromosome, complete genome77.9504 %Subject ←→ Query31.7659
NC_007796:2387002*Methanospirillum hungatei JF-1, complete genome75.4994 %Subject ←→ Query31.7818
NC_016023:1769925*Bacillus coagulans 36D1 chromosome, complete genome78.0178 %Subject ←→ Query31.8874
NC_014011:1760793*Aminobacterium colombiense DSM 12261 chromosome, complete genome76.0447 %Subject ←→ Query31.9684
NC_006322:2173500Bacillus licheniformis ATCC 14580, complete genome76.6176 %Subject ←→ Query31.9935
NC_014551:1872000Bacillus amyloliquefaciens DSM 7, complete genome76.4522 %Subject ←→ Query32.1659
NC_014551:483773*Bacillus amyloliquefaciens DSM 7, complete genome77.549 %Subject ←→ Query32.1933
NC_014219:3188128*Bacillus selenitireducens MLS10 chromosome, complete genome75.5331 %Subject ←→ Query32.2126
NC_002578:377783*Thermoplasma acidophilum DSM 1728, complete genome76.2071 %Subject ←→ Query32.2517
NC_003552:2674385Methanosarcina acetivorans C2A, complete genome75.6066 %Subject ←→ Query32.3056
NC_014479:3939183*Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete77.2488 %Subject ←→ Query32.3217
NC_014479:3452484Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete76.829 %Subject ←→ Query32.4894
NC_015571:411156Porphyromonas gingivalis TDC60, complete genome75.9007 %Subject ←→ Query32.6171
NC_016047:4108910Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete77.5276 %Subject ←→ Query32.807
NC_009725:1787262Bacillus amyloliquefaciens FZB42, complete genome77.0404 %Subject ←→ Query32.9617
NC_002950:1511955*Porphyromonas gingivalis W83, complete genome84.6262 %Subject ←→ Query33.0544
NC_014364:3633291Spirochaeta smaragdinae DSM 11293 chromosome, complete genome79.0656 %Subject ←→ Query33.1986
NC_012914:1923500Paenibacillus sp. JDR-2, complete genome75.6342 %Subject ←→ Query33.2254
NC_015571:2044000Porphyromonas gingivalis TDC60, complete genome81.3787 %Subject ←→ Query33.3314
NC_014551:2510000*Bacillus amyloliquefaciens DSM 7, complete genome75.5392 %Subject ←→ Query33.5634
NC_016047:3632489Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete76.6759 %Subject ←→ Query34.0296
NC_006322:3418268Bacillus licheniformis ATCC 14580, complete genome76.5135 %Subject ←→ Query34.2705
NC_014364:4578408Spirochaeta smaragdinae DSM 11293 chromosome, complete genome78.3364 %Subject ←→ Query34.4426
NC_016023:2163000*Bacillus coagulans 36D1 chromosome, complete genome75.5545 %Subject ←→ Query34.5001
NC_002950:879930*Porphyromonas gingivalis W83, complete genome77.3621 %Subject ←→ Query34.5736
NC_015634:2547144Bacillus coagulans 2-6 chromosome, complete genome76.7371 %Subject ←→ Query34.5737
NC_009725:1159637*Bacillus amyloliquefaciens FZB42, complete genome76.0938 %Subject ←→ Query34.5848
NC_006322:3628143Bacillus licheniformis ATCC 14580, complete genome75.383 %Subject ←→ Query34.7261
NC_007907:5185510Desulfitobacterium hafniense Y51, complete genome75.1501 %Subject ←→ Query34.7666
NC_010729:1179008*Porphyromonas gingivalis ATCC 33277, complete genome80.6893 %Subject ←→ Query34.8701
NC_010729:619664*Porphyromonas gingivalis ATCC 33277, complete genome83.5815 %Subject ←→ Query35.2723
NC_014551:3864127Bacillus amyloliquefaciens DSM 7, complete genome78.1281 %Subject ←→ Query35.3295
NC_009725:496443*Bacillus amyloliquefaciens FZB42, complete genome75.4688 %Subject ←→ Query35.4002
NC_015160:4285542*Odoribacter splanchnicus DSM 20712 chromosome, complete genome77.454 %Subject ←→ Query35.4063
NC_009725:2072475Bacillus amyloliquefaciens FZB42, complete genome76.0049 %Subject ←→ Query35.7054
NC_006322:567987*Bacillus licheniformis ATCC 14580, complete genome75.9957 %Subject ←→ Query35.8713
NC_014551:2057971Bacillus amyloliquefaciens DSM 7, complete genome76.5411 %Subject ←→ Query35.9324
NC_013406:5066769*Paenibacillus sp. Y412MC10 chromosome, complete genome75.818 %Subject ←→ Query36.0422
NC_015164:29004Bacteroides salanitronis DSM 18170 chromosome, complete genome78.7837 %Subject ←→ Query36.1564
NC_014507:1403000Methanoplanus petrolearius DSM 11571 chromosome, complete genome80.7384 %Subject ←→ Query36.2716
NC_015164:63590*Bacteroides salanitronis DSM 18170 chromosome, complete genome76.152 %Subject ←→ Query36.3296
NC_014364:667841Spirochaeta smaragdinae DSM 11293 chromosome, complete genome79.8376 %Subject ←→ Query36.4759
NC_015164:325212*Bacteroides salanitronis DSM 18170 chromosome, complete genome75.3309 %Subject ←→ Query36.6265
NC_007907:960104*Desulfitobacterium hafniense Y51, complete genome76.1703 %Subject ←→ Query36.8442
NC_015164:3659000Bacteroides salanitronis DSM 18170 chromosome, complete genome76.3542 %Subject ←→ Query36.9763
NC_015634:359500*Bacillus coagulans 2-6 chromosome, complete genome77.4234 %Subject ←→ Query37.1292
NC_004663:6223442*Bacteroides thetaiotaomicron VPI-5482, complete genome76.1918 %Subject ←→ Query37.2375
NC_015164:1952500Bacteroides salanitronis DSM 18170 chromosome, complete genome75.6342 %Subject ←→ Query37.3063
NC_015164:960525Bacteroides salanitronis DSM 18170 chromosome, complete genome78.9154 %Subject ←→ Query37.3425
NC_006322:203932*Bacillus licheniformis ATCC 14580, complete genome75.5423 %Subject ←→ Query37.4168
NC_015634:652000*Bacillus coagulans 2-6 chromosome, complete genome75.2267 %Subject ←→ Query37.5131
NC_014364:2246524*Spirochaeta smaragdinae DSM 11293 chromosome, complete genome81.3542 %Subject ←→ Query37.5351
NC_009725:692237Bacillus amyloliquefaciens FZB42, complete genome76.0294 %Subject ←→ Query37.5873
NC_014377:1943476Thermosediminibacter oceani DSM 16646 chromosome, complete genome77.8002 %Subject ←→ Query37.9103
NC_009725:3809403Bacillus amyloliquefaciens FZB42, complete genome76.3726 %Subject ←→ Query38.0857
NC_006322:4149500*Bacillus licheniformis ATCC 14580, complete genome77.1048 %Subject ←→ Query38.2051
NC_014551:1279229*Bacillus amyloliquefaciens DSM 7, complete genome77.9412 %Subject ←→ Query38.31
NC_015164:2473496*Bacteroides salanitronis DSM 18170 chromosome, complete genome77.6164 %Subject ←→ Query38.3493
NC_007759:2179000*Syntrophus aciditrophicus SB, complete genome75.4075 %Subject ←→ Query38.7732
NC_010831:1224000Chlorobium phaeobacteroides BS1, complete genome75.0521 %Subject ←→ Query39.0792
NC_014033:395000*Prevotella ruminicola 23 chromosome, complete genome75.5208 %Subject ←→ Query39.5521
NC_014364:2322269*Spirochaeta smaragdinae DSM 11293 chromosome, complete genome81.8505 %Subject ←→ Query39.7692
NC_014551:809025*Bacillus amyloliquefaciens DSM 7, complete genome75.0153 %Subject ←→ Query40.3152
NC_013406:1217385Paenibacillus sp. Y412MC10 chromosome, complete genome77.4786 %Subject ←→ Query40.6606
NC_009725:2859630Bacillus amyloliquefaciens FZB42, complete genome75.4473 %Subject ←→ Query40.7378
NC_015578:2341026Treponema primitia ZAS-2 chromosome, complete genome76.011 %Subject ←→ Query41.1981
NC_015277:6213304*Sphingobacterium sp. 21 chromosome, complete genome77.1752 %Subject ←→ Query41.8101
NC_015578:1940097*Treponema primitia ZAS-2 chromosome, complete genome75.2451 %Subject ←→ Query42.2757
NC_015578:247266*Treponema primitia ZAS-2 chromosome, complete genome75.0276 %Subject ←→ Query42.47
NC_013406:3583474Paenibacillus sp. Y412MC10 chromosome, complete genome75.8548 %Subject ←→ Query42.5396
NC_014364:394899Spirochaeta smaragdinae DSM 11293 chromosome, complete genome79.1513 %Subject Query44.1589
NC_014219:3254268*Bacillus selenitireducens MLS10 chromosome, complete genome75.0398 %Subject Query44.161
NC_015311:2626850Prevotella denticola F0289 chromosome, complete genome79.3505 %Subject Query45.0299
NC_015311:1612366*Prevotella denticola F0289 chromosome, complete genome76.3879 %Subject Query48.0003
NC_015311:403281*Prevotella denticola F0289 chromosome, complete genome76.1979 %Subject Query48.0161
NC_013406:2866000*Paenibacillus sp. Y412MC10 chromosome, complete genome76.5227 %Subject Query50.1139