Pre_GI: OUP Neighbours

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Query: NC_002506:370629 Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete

D: 32.6953

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

Number of Neighbours: 143




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_010611:3413333*Acinetobacter baumannii ACICU, complete genome76.924 %Subject ←→ Query31.1907
NC_010611:208268*Acinetobacter baumannii ACICU, complete genome75.2665 %Subject ←→ Query32.4822
NC_010410:480518*Acinetobacter baumannii AYE, complete genome75.9559 %Subject ←→ Query30.396
NC_015554:1653614Alteromonas sp. SN2 chromosome, complete genome75.1317 %Subject ←→ Query25.4955
NC_014932:1387818*Bartonella clarridgeiae 73, complete genome76.8474 %Subject Query21.3964
NC_010161:596034*Bartonella tribocorum CIP 105476, complete genome75.9896 %Subject ←→ Query26.0944
NC_005861:2120633Candidatus Protochlamydia amoebophila UWE25, complete genome75.9865 %Subject Query22.6855
NC_011026:2450325Chloroherpeton thalassium ATCC 35110, complete genome75.5729 %Subject ←→ Query32.4678
NC_011527:1255998Coxiella burnetii CbuG_Q212, complete genome75.6189 %Subject ←→ Query23.804
NC_009727:670616Coxiella burnetii Dugway 7E9-12, complete genome75.2512 %Subject ←→ Query23.2673
NC_010117:700112Coxiella burnetii RSA 331, complete genome76.1795 %Subject ←→ Query23.7977
NC_002971:619355Coxiella burnetii RSA 493, complete genome76.0631 %Subject ←→ Query23.2807
NC_015497:4683741*Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome75.5178 %Subject ←→ Query29.5224
NC_015497:2997275*Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome78.7868 %Subject ←→ Query25.0122
NC_015497:1287877Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome76.4798 %Subject ←→ Query27.577
NC_011852:211314Haemophilus parasuis SH0165, complete genome75.3922 %Subject ←→ Query30.4292
NC_012982:1899973Hirschia baltica ATCC 49814, complete genome77.3744 %Subject ←→ Query30.3976
NC_013166:961431Kangiella koreensis DSM 16069, complete genome77.2028 %Subject ←→ Query26.6659
NC_014334:2307950Lactobacillus casei str. Zhang chromosome, complete genome75.049 %Subject ←→ Query25.5593
NC_010999:1245239Lactobacillus casei, complete genome75.0735 %Subject ←→ Query29.2811
NC_014106:54587*Lactobacillus crispatus ST1, complete genome75.2911 %Subject ←→ Query26.719
NC_010080:69000*Lactobacillus helveticus DPC 4571, complete genome75.0429 %Subject ←→ Query28.2732
NC_015602:1339067*Lactobacillus kefiranofaciens ZW3 chromosome, complete genome75.3064 %Subject ←→ Query30.661
NC_012984:3077004Lactobacillus plantarum JDM1, complete genome75.1134 %Subject ←→ Query28.2101
NC_004567:343500Lactobacillus plantarum WCFS1, complete genome75.4075 %Subject ←→ Query30.9556
NC_013861:3215640Legionella longbeachae NSW150, complete genome75.0153 %Subject Query19.969
NC_006369:2888701Legionella pneumophila str. Lens, complete genome76.921 %Subject Query21.9388
NC_006368:3028286Legionella pneumophila str. Paris, complete genome76.6942 %Subject ←→ Query24.3495
NC_002942:2943206Legionella pneumophila subsp. pneumophila str. Philadelphia 1,77.3652 %Subject ←→ Query22.7983
NC_015276:632206Marinomonas mediterranea MMB-1 chromosome, complete genome75.3615 %Subject ←→ Query30.8175
NC_009654:3316458*Marinomonas sp. MWYL1, complete genome77.5919 %Subject ←→ Query32.1528
NC_009654:3215205*Marinomonas sp. MWYL1, complete genome76.7984 %Subject ←→ Query30.1455
NC_009654:2940278Marinomonas sp. MWYL1, complete genome75.5178 %Subject ←→ Query29.6145
NC_009654:2309365*Marinomonas sp. MWYL1, complete genome76.6483 %Subject ←→ Query30.338
NC_009654:91096*Marinomonas sp. MWYL1, complete genome75.9498 %Subject ←→ Query30.2225
NC_009654:4253431*Marinomonas sp. MWYL1, complete genome76.0172 %Subject ←→ Query29.9246
NC_009654:3849774*Marinomonas sp. MWYL1, complete genome76.7494 %Subject ←→ Query30.3052
NC_012968:2228943*Methylotenera mobilis JLW8, complete genome75.5116 %Subject ←→ Query28.5567
NC_002663:564958Pasteurella multocida subsp. multocida str. Pm70, complete genome75.3462 %Subject ←→ Query25.0787
NC_006370:1810842Photobacterium profundum SS9 chromosome 1, complete sequence75.6556 %Subject ←→ Query34.6547
NC_006371:1997954*Photobacterium profundum SS9 chromosome 2, complete sequence75.0643 %Subject ←→ Query35.2715
NC_006371:1848487Photobacterium profundum SS9 chromosome 2, complete sequence77.6287 %Subject ←→ Query27.4745
NC_008228:1404126Pseudoalteromonas atlantica T6c, complete genome75.1409 %Subject ←→ Query28.2625
NC_008228:1307943Pseudoalteromonas atlantica T6c, complete genome75.864 %Subject ←→ Query28.1676
NC_008228:816000Pseudoalteromonas atlantica T6c, complete genome75.2696 %Subject ←→ Query26.6385
NC_008228:3841897Pseudoalteromonas atlantica T6c, complete genome75.1869 %Subject ←→ Query28.1858
NC_008228:3679949Pseudoalteromonas atlantica T6c, complete genome76.5319 %Subject ←→ Query27.5234
NC_008228:2068641Pseudoalteromonas atlantica T6c, complete genome76.4675 %Subject ←→ Query26.7571
NC_009052:1899954Shewanella baltica OS155, complete genome75.5576 %Subject ←→ Query31.5886
NC_009052:1211989*Shewanella baltica OS155, complete genome76.3572 %Subject ←→ Query30.5674
NC_009052:3381943Shewanella baltica OS155, complete genome75.3339 %Subject ←→ Query34.4844
NC_009052:2683447*Shewanella baltica OS155, complete genome75.53 %Subject ←→ Query28.9093
NC_009999:38832Shewanella baltica OS195 plasmid pS19502, complete sequence75.3493 %Subject ←→ Query28.8515
NC_009997:2352948Shewanella baltica OS195, complete genome77.1814 %Subject ←→ Query33.4008
NC_009997:2069894Shewanella baltica OS195, complete genome78.6765 %Subject ←→ Query30.9447
NC_009997:1368471*Shewanella baltica OS195, complete genome75.2175 %Subject ←→ Query29.5659
NC_009997:5188221Shewanella baltica OS195, complete genome76.0263 %Subject ←→ Query29.6455
NC_009997:3661083Shewanella baltica OS195, complete genome76.057 %Subject ←→ Query27.3924
NC_009997:2699644Shewanella baltica OS195, complete genome76.348 %Subject ←→ Query29.7301
NC_007954:3887488Shewanella denitrificans OS217, complete genome77.402 %Subject ←→ Query28.7444
NC_007954:3171081*Shewanella denitrificans OS217, complete genome76.7096 %Subject ←→ Query32.7279
NC_007954:1823085*Shewanella denitrificans OS217, complete genome75.9344 %Subject ←→ Query27.7501
NC_007954:1324062*Shewanella denitrificans OS217, complete genome76.4706 %Subject ←→ Query30.7014
NC_008345:3394154*Shewanella frigidimarina NCIMB 400, complete genome75.6893 %Subject ←→ Query27.2838
NC_010334:2749250Shewanella halifaxensis HAW-EB4, complete genome75.6495 %Subject ←→ Query27.9161
NC_010334:2615260Shewanella halifaxensis HAW-EB4, complete genome76.731 %Subject ←→ Query28.3423
NC_010334:1783500*Shewanella halifaxensis HAW-EB4, complete genome75.8272 %Subject ←→ Query33.9047
NC_010334:1701957Shewanella halifaxensis HAW-EB4, complete genome75.576 %Subject ←→ Query31.739
NC_010334:1561691Shewanella halifaxensis HAW-EB4, complete genome75.671 %Subject ←→ Query33.4149
NC_004347:3670145*Shewanella oneidensis MR-1, complete genome75.5882 %Subject ←→ Query29.9322
NC_004347:3303957Shewanella oneidensis MR-1, complete genome75.7169 %Subject ←→ Query29.572
NC_009901:3317068Shewanella pealeana ATCC 700345, complete genome75.2145 %Subject ←→ Query29.6662
NC_009901:2272206Shewanella pealeana ATCC 700345, complete genome75.7935 %Subject ←→ Query29.7826
NC_009901:1693500*Shewanella pealeana ATCC 700345, complete genome76.9332 %Subject ←→ Query34.2613
NC_009901:1516340Shewanella pealeana ATCC 700345, complete genome75.8915 %Subject ←→ Query29.3247
NC_009831:1539159*Shewanella sediminis HAW-EB3, complete genome77.932 %Subject ←→ Query34.3628
NC_008577:1579950Shewanella sp. ANA-3 chromosome 1, complete sequence75.4504 %Subject ←→ Query32.2252
NC_008577:4611431Shewanella sp. ANA-3 chromosome 1, complete sequence76.9761 %Subject ←→ Query35.4875
NC_008577:3738758*Shewanella sp. ANA-3 chromosome 1, complete sequence75.0674 %Subject ←→ Query32.1574
NC_008577:2604281Shewanella sp. ANA-3 chromosome 1, complete sequence75.4534 %Subject ←→ Query34.9877
NC_008577:2402165Shewanella sp. ANA-3 chromosome 1, complete sequence76.0141 %Subject ←→ Query34.8689
NC_008577:1885809*Shewanella sp. ANA-3 chromosome 1, complete sequence76.1458 %Subject ←→ Query32.5693
NC_008321:3815940*Shewanella sp. MR-4, complete genome75.8824 %Subject ←→ Query34.6739
NC_008321:1993541*Shewanella sp. MR-4, complete genome75.5208 %Subject ←→ Query34.9743
NC_008322:1186000*Shewanella sp. MR-7, complete genome75.8517 %Subject ←→ Query34.6086
NC_008322:3585601*Shewanella sp. MR-7, complete genome75.046 %Subject ←→ Query32.0176
NC_008322:2716676Shewanella sp. MR-7, complete genome76.0815 %Subject ←→ Query32.7019
NC_008322:2077628*Shewanella sp. MR-7, complete genome78.1648 %Subject ←→ Query31.0943
NC_008322:1595500*Shewanella sp. MR-7, complete genome76.6268 %Subject ←→ Query37.3246
NC_014012:3812754*Shewanella violacea DSS12, complete genome76.1918 %Subject ←→ Query32.0464
NC_014012:1676983Shewanella violacea DSS12, complete genome75.0429 %Subject ←→ Query31.899
NC_010506:5195000Shewanella woodyi ATCC 51908, complete genome76.2132 %Subject ←→ Query32.4018
NC_010506:2046000*Shewanella woodyi ATCC 51908, complete genome75.8885 %Subject ←→ Query34.6328
NC_013798:345339*Streptococcus gallolyticus UCN34, complete genome76.0846 %Subject ←→ Query28.2969
NC_012997:2405500*Teredinibacter turnerae T7901, complete genome76.1857 %Subject ←→ Query36.1474
NC_015581:680460Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome75.0153 %Subject ←→ Query33.4619
NC_007520:903799*Thiomicrospira crunogena XCL-2, complete genome77.5276 %Subject ←→ Query27.7177
NC_007520:407627Thiomicrospira crunogena XCL-2, complete genome77.9105 %Subject ←→ Query25.8025
NC_007520:2305610Thiomicrospira crunogena XCL-2, complete genome75.769 %Subject ←→ Query25.1763
NC_015633:461143Vibrio anguillarum 775 chromosome chromosome I, complete sequence75.1287 %Subject ←→ Query32.6547
NC_015633:413587Vibrio anguillarum 775 chromosome chromosome I, complete sequence75.6219 %Subject ←→ Query26.7419
NC_015633:2919501Vibrio anguillarum 775 chromosome chromosome I, complete sequence75.9038 %Subject ←→ Query29.0917
NC_015633:2565753*Vibrio anguillarum 775 chromosome chromosome I, complete sequence77.1293 %Subject ←→ Query29.7101
NC_015633:2327500*Vibrio anguillarum 775 chromosome chromosome I, complete sequence77.4908 %Subject ←→ Query31.752
NC_015633:1702000Vibrio anguillarum 775 chromosome chromosome I, complete sequence76.1121 %Subject ←→ Query28.5688
NC_015637:819233*Vibrio anguillarum 775 chromosome chromosome II, complete sequence76.0049 %Subject ←→ Query24.545
NC_015637:669593Vibrio anguillarum 775 chromosome chromosome II, complete sequence75.6771 %Subject ←→ Query25.6019
NC_002505:1892430*Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete76.0447 %Subject ←→ Query35.2857
NC_002505:514732*Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete76.731 %Subject ←→ Query36.5511
NC_002505:238569Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete76.0233 %Subject ←→ Query39.3701
NC_002505:1931750Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete77.0221 %Subject ←→ Query34.0291
NC_002506:324552Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete91.5104 %Subject ←→ Query34.7009
NC_002506:298868*Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete83.2506 %Subject ←→ Query33.2059
NC_011184:597496*Vibrio fischeri MJ11 chromosome I, complete sequence76.1949 %Subject ←→ Query27.0599
NC_009783:670449Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequence76.1857 %Subject ←→ Query38.4002
NC_004603:1897532Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete83.2812 %Subject ←→ Query30.8799
NC_004603:1115134*Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete76.0601 %Subject ←→ Query34.0426
NC_004603:230000Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete76.2286 %Subject ←→ Query34.7279
NC_004605:1385444Vibrio parahaemolyticus RIMD 2210633 chromosome II, complete78.0055 %Subject ←→ Query29.9092
NC_004605:1092476Vibrio parahaemolyticus RIMD 2210633 chromosome II, complete75.4044 %Subject ←→ Query28.997
NC_013456:1743046Vibrio sp. Ex25 chromosome 1, complete genome81.9271 %Subject ←→ Query30.0644
NC_013456:145171*Vibrio sp. Ex25 chromosome 1, complete genome76.1918 %Subject ←→ Query32.0784
NC_013456:3011518Vibrio sp. Ex25 chromosome 1, complete genome75.5821 %Subject ←→ Query31.6492
NC_013456:2528284*Vibrio sp. Ex25 chromosome 1, complete genome77.7175 %Subject ←→ Query32.8064
NC_013456:212150Vibrio sp. Ex25 chromosome 1, complete genome76.2316 %Subject ←→ Query29.9962
NC_013456:1843000*Vibrio sp. Ex25 chromosome 1, complete genome78.0944 %Subject ←→ Query28.916
NC_013456:1819421*Vibrio sp. Ex25 chromosome 1, complete genome81.2163 %Subject ←→ Query29.5743
NC_011753:206178Vibrio splendidus LGP32 chromosome 1, complete genome76.6023 %Subject ←→ Query29.7679
NC_011753:2018500Vibrio splendidus LGP32 chromosome 1, complete genome80.1287 %Subject ←→ Query25.5289
NC_011753:1680738Vibrio splendidus LGP32 chromosome 1, complete genome75.6005 %Subject ←→ Query27.3346
NC_004459:2025436Vibrio vulnificus CMCP6 chromosome I, complete sequence75.7506 %Subject ←→ Query35.3621
NC_004459:1Vibrio vulnificus CMCP6 chromosome I, complete sequence76.3603 %Subject ←→ Query32.7196
NC_004459:767127*Vibrio vulnificus CMCP6 chromosome I, complete sequence75.9589 %Subject ←→ Query32.0829
NC_004459:349500*Vibrio vulnificus CMCP6 chromosome I, complete sequence75.6924 %Subject ←→ Query34.4599
NC_004459:2443000*Vibrio vulnificus CMCP6 chromosome I, complete sequence84.4485 %Subject ←→ Query31.6
NC_004460:81687Vibrio vulnificus CMCP6 chromosome II, complete sequence75.6219 %Subject ←→ Query28.2861
NC_005139:305420Vibrio vulnificus YJ016 chromosome I, complete sequence75.3983 %Subject ←→ Query35.5808
NC_005139:2201820*Vibrio vulnificus YJ016 chromosome I, complete sequence77.8523 %Subject ←→ Query33.0058
NC_005139:1784000Vibrio vulnificus YJ016 chromosome I, complete sequence84.2678 %Subject ←→ Query31.7867
NC_005139:796546Vibrio vulnificus YJ016 chromosome I, complete sequence76.6176 %Subject ←→ Query31.9602
NC_005139:518760Vibrio vulnificus YJ016 chromosome I, complete sequence75.9498 %Subject ←→ Query29.8091
NC_005139:343500Vibrio vulnificus YJ016 chromosome I, complete sequence76.0049 %Subject ←→ Query34.9328
NC_005140:660305Vibrio vulnificus YJ016 chromosome II, complete sequence75.5392 %Subject ←→ Query27.8453