Pre_GI: OUP Neighbours

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Query: NC_002505:980595 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete

D: 33.004

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

Number of Neighbours: 34




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_009654:4716417Marinomonas sp. MWYL1, complete genome79.6262 %Subject ←→ Query32.6103
NC_006370:166000Photobacterium profundum SS9 chromosome 1, complete sequence78.6795 %Subject ←→ Query28.1736
NC_002505:168532Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete78.652 %Subject ←→ Query38.3098
NC_004459:1794540*Vibrio vulnificus CMCP6 chromosome I, complete sequence78.6489 %Subject ←→ Query31.6148
NC_009654:4624459Marinomonas sp. MWYL1, complete genome78.6152 %Subject ←→ Query30.4991
NC_006371:1973500Photobacterium profundum SS9 chromosome 2, complete sequence78.1955 %Subject ←→ Query28.6413
NC_010554:2646806Proteus mirabilis HI4320, complete genome78.1679 %Subject ←→ Query35.3988
NC_009052:1394000*Shewanella baltica OS155, complete genome78.03 %Subject ←→ Query28.5263
NC_008321:458811Shewanella sp. MR-4, complete genome77.9565 %Subject ←→ Query31.5836
NC_004459:1679335*Vibrio vulnificus CMCP6 chromosome I, complete sequence77.8922 %Subject ←→ Query35.7874
NC_015276:855150Marinomonas mediterranea MMB-1 chromosome, complete genome77.8431 %Subject ←→ Query32.162
NC_005140:960261Vibrio vulnificus YJ016 chromosome II, complete sequence77.4479 %Subject ←→ Query28.0411
NC_009052:144619*Shewanella baltica OS155, complete genome77.3346 %Subject ←→ Query27.7085
NC_009997:4091371Shewanella baltica OS195, complete genome77.068 %Subject ←→ Query29.1038
NC_008577:1690946*Shewanella sp. ANA-3 chromosome 1, complete sequence77.0496 %Subject ←→ Query34.9418
NC_005139:2731623*Vibrio vulnificus YJ016 chromosome I, complete sequence76.6207 %Subject ←→ Query31.989
NC_008322:1708631*Shewanella sp. MR-7, complete genome76.1121 %Subject ←→ Query33.7062
NC_015276:2804874*Marinomonas mediterranea MMB-1 chromosome, complete genome76.0049 %Subject ←→ Query29.8547
NC_002506:207097*Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete75.8885 %Subject ←→ Query37.898
NC_015276:1037862Marinomonas mediterranea MMB-1 chromosome, complete genome75.6403 %Subject ←→ Query30.9217
NC_015276:2852010Marinomonas mediterranea MMB-1 chromosome, complete genome75.5821 %Subject ←→ Query30.4475
NC_008526:74500*Lactobacillus casei ATCC 334, complete genome75.5668 %Subject ←→ Query28.9383
NC_015559:3511231Marinomonas posidonica IVIA-Po-181 chromosome, complete genome75.4688 %Subject ←→ Query30.6283
NC_004460:1618892Vibrio vulnificus CMCP6 chromosome II, complete sequence75.4136 %Subject ←→ Query29.7179
NC_015581:1133775*Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome75.3646 %Subject ←→ Query33.7044
NC_008321:3232000Shewanella sp. MR-4, complete genome75.3033 %Subject ←→ Query30.7332
NC_004460:973738Vibrio vulnificus CMCP6 chromosome II, complete sequence75.2635 %Subject ←→ Query30.5138
NC_015497:3614817Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome75.2328 %Subject ←→ Query26.8361
NC_005140:1820970Vibrio vulnificus YJ016 chromosome II, complete sequence75.193 %Subject ←→ Query27.8788
NC_002942:1109618Legionella pneumophila subsp. pneumophila str. Philadelphia 1,75.1808 %Subject ←→ Query25.2542
NC_008577:613958Shewanella sp. ANA-3 chromosome 1, complete sequence75.1746 %Subject ←→ Query31.9005
NC_008321:1636148*Shewanella sp. MR-4, complete genome75.0858 %Subject ←→ Query33.2895
NC_009052:71058Shewanella baltica OS155, complete genome75.0551 %Subject ←→ Query28.9961
NC_004460:1313468Vibrio vulnificus CMCP6 chromosome II, complete sequence75.0398 %Subject ←→ Query33.3414