Pre_GI: OUP Neighbours

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Query: NC_002505:2537655 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete

D: 33.5512

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

Number of Neighbours: 27




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_005140:340000Vibrio vulnificus YJ016 chromosome II, complete sequence79.2249 %Subject ←→ Query26.4713
NC_005140:1820970Vibrio vulnificus YJ016 chromosome II, complete sequence79.6446 %Subject ←→ Query27.8788
NC_014366:478000*Gamma proteobacterium HdN1, complete genome75.7812 %Subject ←→ Query28.2485
NC_009138:668000Herminiimonas arsenicoxydans, complete genome77.5245 %Subject ←→ Query28.6266
NC_008526:74500*Lactobacillus casei ATCC 334, complete genome75.864 %Subject ←→ Query28.9383
NC_009138:467268Herminiimonas arsenicoxydans, complete genome76.0202 %Subject ←→ Query29.4022
NC_004460:1618892Vibrio vulnificus CMCP6 chromosome II, complete sequence76.3971 %Subject ←→ Query29.7179
NC_004460:973738Vibrio vulnificus CMCP6 chromosome II, complete sequence81.1795 %Subject ←→ Query30.5138
NC_013422:1604157Halothiobacillus neapolitanus c2, complete genome76.2163 %Subject ←→ Query31.1466
NC_015731:447411Nitrosomonas sp. Is79A3 chromosome, complete genome75.7169 %Subject ←→ Query31.3594
NC_004459:1794540*Vibrio vulnificus CMCP6 chromosome I, complete sequence78.8787 %Subject ←→ Query31.6148
NC_004460:1313468Vibrio vulnificus CMCP6 chromosome II, complete sequence77.7757 %Subject ←→ Query33.3414
NC_004460:1237129Vibrio vulnificus CMCP6 chromosome II, complete sequence81.9455 %Subject ←→ Query33.7123
NC_014366:1435785*Gamma proteobacterium HdN1, complete genome76.7524 %Subject ←→ Query33.8336
NC_002935:1378566*Corynebacterium diphtheriae NCTC 13129, complete genome75.9926 %Subject ←→ Query34.6555
NC_010554:2646806Proteus mirabilis HI4320, complete genome76.2837 %Subject ←→ Query35.3988
NC_014837:2803447*Pantoea sp. At-9b chromosome, complete genome75.0031 %Subject ←→ Query35.5354
NC_012982:711122*Hirschia baltica ATCC 49814, complete genome75.3922 %Subject ←→ Query36.0979
CP002516:1165726*Escherichia coli KO11, complete genome75.576 %Subject ←→ Query36.7113
NC_002506:207097*Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete79.3842 %Subject ←→ Query37.898
NC_004349:3938Shewanella oneidensis MR-1 plasmid pMR-1, complete sequence76.0539 %Subject ←→ Query38.1809
NC_002505:168532Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete80.4626 %Subject ←→ Query38.3098
NC_002488:1812696Xylella fastidiosa 9a5c, complete genome76.7371 %Subject ←→ Query38.8176
NC_015554:4724245*Alteromonas sp. SN2 chromosome, complete genome75.3554 %Subject ←→ Query42.0329
NC_014837:33014*Pantoea sp. At-9b chromosome, complete genome75.9191 %Subject ←→ Query43.5321
NC_008573:195317Shewanella sp. ANA-3 plasmid 1, complete sequence76.973 %Subject Query46.5154
NC_010611:240839Acinetobacter baumannii ACICU, complete genome75.4933 %Subject Query48.2217