Pre_GI: OUP Neighbours

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Query: NC_002488:45219 Xylella fastidiosa 9a5c, complete genome

D: 34.1567

Host Lineage: Xylella fastidiosa; Xylella; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a pathogenic strain (8.1b) isolated in 1992 in France that had come from infected twigs derived from the sweet orange strain Valencia in Brazil in the same year. This organism was first identified in 1993 as the causal agent of citrus variegated chlorosis, a disease that affects varieties of sweet oranges. Other strains of this species cause a range of diseases in mulberry, pear, almond, elm, sycamore, oak, maple, pecan and coffee which collectively result in multimillion dollar devastation of economically important plants. Xylella fastidiosa is similar to Xanthomonas campestris pv. campestris in that it produces a wide variety of pathogenic factors for colonization in a host-specific manner including a large number of fimbrial and afimbrial adhesins for attachment. It does not contain a type III secretion system, but possesses genes for a type II secretion system for export of exoenzymes that degrade the plant cell wall and allow the bacterium to colonize the plant xylem.

Number of Neighbours: 10

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_002488:2235883Xylella fastidiosa 9a5c, complete genome82.644 %Subject ←→ Query33.7761
NC_002488:2546495Xylella fastidiosa 9a5c, complete genome80.5607 %Subject ←→ Query34.3385
NC_002488:1157684Xylella fastidiosa 9a5c, complete genome78.6305 %Subject ←→ Query34.9246
NC_002488:2502000*Xylella fastidiosa 9a5c, complete genome75.9926 %Subject ←→ Query35.6822
NC_004556:1933944Xylella fastidiosa Temecula1, complete genome79.5772 %Subject ←→ Query37.8222
NC_004556:1132354*Xylella fastidiosa Temecula1, complete genome75.3431 %Subject ←→ Query38.8649
NC_004556:151593*Xylella fastidiosa Temecula1, complete genome82.2978 %Subject ←→ Query39.9027
NC_004556:1076063Xylella fastidiosa Temecula1, complete genome75.3891 %Subject ←→ Query42.5799
NC_010577:1087092Xylella fastidiosa M23, complete genome75.1164 %Subject ←→ Query42.7341
NC_004556:1611973Xylella fastidiosa Temecula1, complete genome82.886 %Subject ←→ Query42.9799