Pre_GI: OUP Neighbours

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Query: NC_002488:1 Xylella fastidiosa 9a5c, complete genome

D: 34.5604

Host Lineage: Xylella fastidiosa; Xylella; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a pathogenic strain (8.1b) isolated in 1992 in France that had come from infected twigs derived from the sweet orange strain Valencia in Brazil in the same year. This organism was first identified in 1993 as the causal agent of citrus variegated chlorosis, a disease that affects varieties of sweet oranges. Other strains of this species cause a range of diseases in mulberry, pear, almond, elm, sycamore, oak, maple, pecan and coffee which collectively result in multimillion dollar devastation of economically important plants. Xylella fastidiosa is similar to Xanthomonas campestris pv. campestris in that it produces a wide variety of pathogenic factors for colonization in a host-specific manner including a large number of fimbrial and afimbrial adhesins for attachment. It does not contain a type III secretion system, but possesses genes for a type II secretion system for export of exoenzymes that degrade the plant cell wall and allow the bacterium to colonize the plant xylem.

Number of Neighbours: 35

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_010611:797351Acinetobacter baumannii ACICU, complete genome75.1869 %Subject Query23.2125
NC_009085:893601Acinetobacter baumannii ATCC 17978, complete genome75.3002 %Subject ←→ Query24.927
NC_005955:1029435*Bartonella quintana str. Toulouse, complete genome75.0643 %Subject ←→ Query25.1664
NC_014334:2696000Lactobacillus casei str. Zhang chromosome, complete genome75.1838 %Subject ←→ Query25.2128
NC_015637:891842Vibrio anguillarum 775 chromosome chromosome II, complete sequence76.2776 %Subject ←→ Query26.5351
NC_015222:2475792*Nitrosomonas sp. AL212 chromosome, complete genome75.6373 %Subject ←→ Query26.7854
NC_010611:154307*Acinetobacter baumannii ACICU, complete genome75.4228 %Subject ←→ Query27.2606
NC_014259:3984568*Acinetobacter sp. DR1 chromosome, complete genome76.8076 %Subject ←→ Query27.6436
NC_008150:4561633*Yersinia pestis Antiqua, complete genome76.2561 %Subject ←→ Query28.4594
NC_010465:3958766Yersinia pseudotuberculosis YPIII, complete genome75.6005 %Subject ←→ Query28.7816
NC_010531:708049Polynucleobacter necessarius STIR1, complete genome76.8229 %Subject ←→ Query28.9112
NC_010410:3777076*Acinetobacter baumannii AYE, complete genome75.2635 %Subject ←→ Query29.0441
NC_004088:4116676Yersinia pestis KIM, complete genome75.7966 %Subject ←→ Query29.2173
NC_010554:1871000Proteus mirabilis HI4320, complete genome76.1734 %Subject ←→ Query29.2221
NC_003143:483395*Yersinia pestis CO92, complete genome76.2806 %Subject ←→ Query29.2984
NC_005810:4224500Yersinia pestis biovar Microtus str. 91001, complete genome76.0355 %Subject ←→ Query29.8821
NC_008149:402599*Yersinia pestis Nepal516, complete genome76.7586 %Subject ←→ Query30.0082
NC_015731:3077842Nitrosomonas sp. Is79A3 chromosome, complete genome77.0374 %Subject ←→ Query30.0354
NC_006155:713174*Yersinia pseudotuberculosis IP 32953, complete genome77.4694 %Subject ←→ Query30.0948
NC_010159:809663Yersinia pestis Angola, complete genome76.3021 %Subject ←→ Query30.5995
NC_013198:394000*Lactobacillus rhamnosus GG, complete genome75.913 %Subject ←→ Query31.056
NC_015581:771482*Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome75.5362 %Subject ←→ Query31.8014
NC_008322:3585601*Shewanella sp. MR-7, complete genome75.2267 %Subject ←→ Query32.0176
NC_012917:2971702Pectobacterium carotovorum subsp. carotovorum PC1, complete genome76.4185 %Subject ←→ Query32.0937
NC_005810:2180303*Yersinia pestis biovar Microtus str. 91001, complete genome75.1869 %Subject ←→ Query33.5745
NC_006155:2461262*Yersinia pseudotuberculosis IP 32953, complete genome75.5974 %Subject ←→ Query34.0957
NC_015224:3225000*Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,76.3051 %Subject ←→ Query35.2572
NC_010577:1Xylella fastidiosa M23, complete genome92.644 %Subject ←→ Query37.1778
NC_004556:1Xylella fastidiosa Temecula1, complete genome92.7206 %Subject ←→ Query37.6064
NC_006370:847204Photobacterium profundum SS9 chromosome 1, complete sequence77.0282 %Subject ←→ Query37.8101
NC_004547:1600900Erwinia carotovora subsp. atroseptica SCRI1043, complete genome75.2114 %Subject ←→ Query39.6404
NC_015567:1660462Serratia sp. AS9 chromosome, complete genome75.5545 %Subject ←→ Query42.6158
NC_015566:1659288Serratia sp. AS12 chromosome, complete genome75.2727 %Subject Query44.7005
NC_013421:3279499Pectobacterium wasabiae WPP163, complete genome75.5239 %Subject Query44.7246
NC_012917:1506083Pectobacterium carotovorum subsp. carotovorum PC1, complete genome76.1029 %Subject Query45.1848