Pre_GI: OUP Neighbours

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Query: AP010958:3627355 Escherichia coli O103:H2 str. 12009 DNA, complete genome

D: 43.1575

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

Number of Neighbours: 121




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
AP010958:5090696*Escherichia coli O103:H2 str. 12009 DNA, complete genome91.5135 %Subject ←→ Query42.8493
NC_002695:3852233Escherichia coli O157:H7 str. Sakai, complete genome85.6893 %Subject ←→ Query40.3549
NC_002655:3919545Escherichia coli O157:H7 EDL933, complete genome85.6311 %Subject ←→ Query39.1881
NC_008253:3941938*Escherichia coli 536, complete genome83.4589 %Subject ←→ Query36.7085
NC_008253:4735418Escherichia coli 536, complete genome83.0882 %Subject Query32.6562
NC_009790:42112Escherichia coli E24377A plasmid pETEC_74, complete sequence82.8554 %Subject ←→ Query42.3754
NC_002655:1103991Escherichia coli O157:H7 EDL933, complete genome82.7206 %Subject Query31.019
NC_010498:1117938Escherichia coli SMS-3-5, complete genome82.6869 %Subject Query29.8896
NC_002695:1417912Escherichia coli O157:H7 str. Sakai, complete genome82.6869 %Subject Query31.3382
NC_007946:4779745Escherichia coli UTI89, complete genome82.1201 %Subject ←→ Query34.3298
NC_013716:3327881Citrobacter rodentium ICC168, complete genome82.114 %Subject ←→ Query44.6889
NC_004431:1166568Escherichia coli CFT073, complete genome82.0006 %Subject ←→ Query37.2232
NC_004431:3409389*Escherichia coli CFT073, complete genome81.633 %Subject ←→ Query37.4762
AP010958:3853082*Escherichia coli O103:H2 str. 12009 DNA, complete genome81.5717 %Subject ←→ Query37.9582
NC_008253:334467*Escherichia coli 536, complete genome81.3971 %Subject ←→ Query34.2564
NC_004431:279868Escherichia coli CFT073, complete genome81.1183 %Subject ←→ Query39.5292
NC_008253:296500Escherichia coli 536, complete genome80.864 %Subject ←→ Query35.2505
NC_011750:1094000Escherichia coli IAI39 chromosome, complete genome80.7874 %Subject Query28.554
NC_009788:16360Escherichia coli E24377A plasmid pETEC_73, complete sequence80.3431 %Subject ←→ Query39.7806
NC_007384:1320287*Shigella sonnei Ss046, complete genome80.0092 %Subject ←→ Query33.904
NC_011751:3453683Escherichia coli UMN026 chromosome, complete genome79.8101 %Subject ←→ Query37.7715
NC_011750:3545466*Escherichia coli IAI39 chromosome, complete genome79.7028 %Subject Query32.5632
NC_008563:3332114Escherichia coli APEC O1, complete genome79.6998 %Subject ←→ Query36.3496
NC_007946:1119000*Escherichia coli UTI89, complete genome79.5374 %Subject ←→ Query37.8204
NC_011748:3360967*Escherichia coli 55989, complete genome79.4301 %Subject ←→ Query42.7659
CU928145:3360967*Escherichia coli 55989 chromosome, complete genome79.4301 %Subject ←→ Query42.7659
CP002797:4775780Escherichia coli NA114, complete genome79.4056 %Subject ←→ Query37.0319
NC_010158:1*Yersinia pestis Angola plasmid pMT-pPCP, complete sequence79.3842 %Subject ←→ Query35.0134
NC_013717:5726Citrobacter rodentium ICC168 plasmid pCROD1, complete sequence79.2831 %Subject Query25.079
NC_002655:1053082Escherichia coli O157:H7 EDL933, complete genome79.2524 %Subject ←→ Query37.8144
NC_011750:4947500*Escherichia coli IAI39 chromosome, complete genome79.2065 %Subject Query32.9361
NC_011750:4775770Escherichia coli IAI39 chromosome, complete genome79.0533 %Subject ←→ Query35.7604
NC_004431:1211000*Escherichia coli CFT073, complete genome78.9093 %Subject ←→ Query37.0893
CU928159:30700*Escherichia coli str. 55989 plasmid 55989p, complete genome78.8266 %Subject Query28.6357
NC_009801:2898426*Escherichia coli E24377A, complete genome78.8082 %Subject ←→ Query37.4412
NC_002655:1448605Escherichia coli O157:H7 EDL933, complete genome78.7132 %Subject ←→ Query37.1546
NC_008253:3122148*Escherichia coli 536, complete genome78.6795 %Subject Query32.0871
NC_009786:43331Escherichia coli E24377A plasmid pETEC_80, complete sequence78.6274 %Subject ←→ Query36.4529
CP002797:4603787*Escherichia coli NA114, complete genome78.4712 %Subject Query30.3309
CU928145:4792703*Escherichia coli 55989 chromosome, complete genome78.4436 %Subject Query31.6938
NC_011748:4792703*Escherichia coli 55989, complete genome78.4436 %Subject Query31.6938
NC_002695:1364833Escherichia coli O157:H7 str. Sakai, complete genome78.3211 %Subject ←→ Query37.7023
NC_008563:4707826Escherichia coli APEC O1, complete genome78.3119 %Subject Query32.3018
NC_002128:35000Escherichia coli O157:H7 str. Sakai plasmid pO157, complete78.2843 %Subject ←→ Query41.037
NC_004431:324000Escherichia coli CFT073, complete genome78.1311 %Subject ←→ Query34.8012
NC_010488:48868Escherichia coli SMS-3-5 plasmid pSMS35_130, complete sequence78.0545 %Subject ←→ Query35.6499
NC_007384:3383983Shigella sonnei Ss046, complete genome77.9657 %Subject Query30.7059
NC_007946:289425*Escherichia coli UTI89, complete genome77.8768 %Subject ←→ Query36.7308
NC_010067:892729*Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete77.8248 %Subject ←→ Query33.9375
NC_007946:1073135Escherichia coli UTI89, complete genome77.7911 %Subject ←→ Query38.0761
NC_015963:117178Enterobacter asburiae LF7a plasmid pENTAS01, complete sequence77.7083 %Subject ←→ Query52.6759
NC_011748:1408280*Escherichia coli 55989, complete genome77.6317 %Subject ←→ Query34.5817
CU928145:1408280*Escherichia coli 55989 chromosome, complete genome77.6317 %Subject ←→ Query34.5817
NC_002695:1794635Escherichia coli O157:H7 str. Sakai, complete genome77.6195 %Subject ←→ Query35.9924
NC_008253:3161311Escherichia coli 536, complete genome77.4571 %Subject ←→ Query37.787
NC_007384:3741708Shigella sonnei Ss046, complete genome77.3621 %Subject Query32.0692
NC_011750:1978801Escherichia coli IAI39 chromosome, complete genome77.2733 %Subject ←→ Query33.1799
NC_004431:4319152Escherichia coli CFT073, complete genome77.2641 %Subject ←→ Query34.2595
NC_009800:349592*Escherichia coli HS, complete genome77.2028 %Subject Query30.8783
NC_011083:4547825Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,77.1875 %Subject ←→ Query36.0169
NC_011750:4390000Escherichia coli IAI39 chromosome, complete genome77.1722 %Subject ←→ Query33.521
NC_007946:4875997Escherichia coli UTI89, complete genome77.1477 %Subject ←→ Query33.512
NC_009801:4882684Escherichia coli E24377A, complete genome77.0558 %Subject ←→ Query35.1675
NC_007414:56508Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequence77.0129 %Subject ←→ Query42.1367
NC_008253:4817864Escherichia coli 536, complete genome76.9087 %Subject ←→ Query33.3548
NC_007613:1038000Shigella boydii Sb227, complete genome76.8566 %Subject Query30.5697
NC_015963:4500Enterobacter asburiae LF7a plasmid pENTAS01, complete sequence76.8536 %Subject ←→ Query47.8868
NC_002695:3468873*Escherichia coli O157:H7 str. Sakai, complete genome76.8474 %Subject ←→ Query36.813
NC_011751:643976*Escherichia coli UMN026 chromosome, complete genome76.8413 %Subject Query30.7806
NC_010498:2278306Escherichia coli SMS-3-5, complete genome76.8076 %Subject ←→ Query34.2186
NC_002655:2264773Escherichia coli O157:H7 EDL933, complete genome76.7433 %Subject ←→ Query36.26
NC_011740:2859933Escherichia fergusonii ATCC 35469, complete genome76.7402 %Subject ←→ Query34.9604
NC_010067:2304313*Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete76.6973 %Subject ←→ Query40.6544
AP010958:2455052*Escherichia coli O103:H2 str. 12009 DNA, complete genome76.682 %Subject Query31.4202
NC_011740:1991941*Escherichia fergusonii ATCC 35469, complete genome76.6085 %Subject Query27.7754
NC_013961:3269368*Erwinia amylovora, complete genome76.5441 %Subject ←→ Query44.7095
NC_010660:86445Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence76.5074 %Subject ←→ Query45.1069
NC_010554:2872000Proteus mirabilis HI4320, complete genome76.4369 %Subject ←→ Query40.1143
NC_013716:5020204Citrobacter rodentium ICC168, complete genome76.2408 %Subject ←→ Query45.8692
NC_014228:3353896Xenorhabdus nematophila ATCC 19061, complete genome76.1642 %Subject ←→ Query38.8102
NC_007384:1696831Shigella sonnei Ss046, complete genome76.106 %Subject Query30.335
NC_006511:2540500Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC76.0968 %Subject ←→ Query37.0863
AP010958:3669500Escherichia coli O103:H2 str. 12009 DNA, complete genome76.057 %Subject ←→ Query42.6045
NC_010102:2762304Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,76.057 %Subject ←→ Query33.1712
NC_009649:94871Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,76.0447 %Subject ←→ Query37.7857
CP002516:4236680Escherichia coli KO11, complete genome75.9528 %Subject Query30.2199
NC_004741:3041294*Shigella flexneri 2a str. 2457T, complete genome75.9283 %Subject ←→ Query33.6878
NC_004631:2615908Salmonella enterica subsp. enterica serovar Typhi Ty2, complete75.864 %Subject ←→ Query36.5722
NC_004431:4955658*Escherichia coli CFT073, complete genome75.8303 %Subject ←→ Query36.0161
NC_002655:1655944Escherichia coli O157:H7 EDL933, complete genome75.7445 %Subject ←→ Query41.582
AP010958:1305712Escherichia coli O103:H2 str. 12009 DNA, complete genome75.7047 %Subject ←→ Query42.7374
NC_010498:2555706Escherichia coli SMS-3-5, complete genome75.674 %Subject ←→ Query35.8686
NC_002655:2142587*Escherichia coli O157:H7 EDL933, complete genome75.6618 %Subject ←→ Query33.7541
NC_009801:1756610Escherichia coli E24377A, complete genome75.6127 %Subject Query32.6826
NC_004431:2747237Escherichia coli CFT073, complete genome75.5331 %Subject ←→ Query36.3806
NC_004431:364000*Escherichia coli CFT073, complete genome75.53 %Subject ←→ Query34.6588
NC_011149:1987291*Salmonella enterica subsp. enterica serovar Agona str. SL483,75.4718 %Subject ←→ Query42.8458
NC_007606:4182188*Shigella dysenteriae Sd197, complete genome75.4565 %Subject Query30.7373
NC_008258:2045000*Shigella flexneri 5 str. 8401, complete genome75.383 %Subject Query27.7177
NC_004337:309833*Shigella flexneri 2a str. 301, complete genome75.3554 %Subject ←→ Query34.975
NC_007941:11319Escherichia coli UTI89 plasmid pUTI89, complete sequence75.3156 %Subject ←→ Query34.4019
NC_010067:51000Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete75.3125 %Subject ←→ Query35.8135
NC_004851:191709Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence75.3033 %Subject ←→ Query44.8472
NC_015663:549425Enterobacter aerogenes KCTC 2190 chromosome, complete genome75.2819 %Subject ←→ Query36.3661
NC_008120:62000Yersinia pestis Antiqua plasmid pMT, complete sequence75.2757 %Subject ←→ Query43.4078
NC_010473:498252*Escherichia coli str. K-12 substr. DH10B, complete genome75.2451 %Subject ←→ Query34.6343
NC_008563:318993*Escherichia coli APEC O1, complete genome75.2145 %Subject Query32.633
NC_006155:2334122Yersinia pseudotuberculosis IP 32953, complete genome75.2053 %Subject Query30.4912
NC_008150:1543635Yersinia pestis Antiqua, complete genome75.1471 %Subject Query32.8584
NC_002655:3538656*Escherichia coli O157:H7 EDL933, complete genome75.1379 %Subject ←→ Query36.7786
NC_014839:170000Pantoea sp. At-9b plasmid pPAT9B02, complete sequence75.1256 %Subject ←→ Query40.4426
AC_000091:1191353*Escherichia coli W3110 DNA, complete genome75.1042 %Subject ←→ Query36.4616
NC_008563:1175035*Escherichia coli APEC O1, complete genome75.1011 %Subject Query31.9208
NC_013421:1505176Pectobacterium wasabiae WPP163, complete genome75.0551 %Subject ←→ Query33.8704
CP002185:4750571*Escherichia coli W, complete genome75.0521 %Subject Query32.0844
NC_002695:1571389Escherichia coli O157:H7 str. Sakai, complete genome75.049 %Subject ←→ Query41.3174
NC_000913:558920*Escherichia coli K12, complete genome75.0398 %Subject ←→ Query34.6124
NC_003143:2258636Yersinia pestis CO92, complete genome75.0306 %Subject Query30.8047
NC_011740:1831845Escherichia fergusonii ATCC 35469, complete genome75.0306 %Subject Query28.5567
NC_010067:2529750Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete75.0214 %Subject ←→ Query36.6103
NC_006511:4465495Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC75.0092 %Subject ←→ Query38.1746