Pre_GI: OUP Neighbours

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Query: AP010958:1472506 Escherichia coli O103:H2 str. 12009 DNA, complete genome

D: 36.7127

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

Number of Neighbours: 57




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_014561:153143Pantoea vagans C9-1 plasmid pPag1, complete sequence75.288 %Subject ←→ Query28.1767
NC_015737:664999*Clostridium sp. SY8519, complete genome75.6373 %Subject ←→ Query28.8363
NC_010465:429095Yersinia pseudotuberculosis YPIII, complete genome75.8364 %Subject ←→ Query29.1646
NC_005810:4469156Yersinia pestis biovar Microtus str. 91001, complete genome76.4583 %Subject ←→ Query29.5112
NC_003143:4006884Yersinia pestis CO92, complete genome75.674 %Subject ←→ Query29.6176
NC_008149:4053363Yersinia pestis Nepal516, complete genome76.2837 %Subject ←→ Query30.0006
NC_004088:266543Yersinia pestis KIM, complete genome76.1458 %Subject ←→ Query30.0081
NC_006155:4302826Yersinia pseudotuberculosis IP 32953, complete genome75.2451 %Subject ←→ Query30.1556
NC_014500:2525880Dickeya dadantii 3937 chromosome, complete genome75.0674 %Subject ←→ Query30.3147
NC_015737:1385585Clostridium sp. SY8519, complete genome75.3676 %Subject ←→ Query30.9582
NC_003277:22257Salmonella typhimurium LT2 plasmid pSLT, complete sequence78.2782 %Subject ←→ Query31.1132
NC_008563:3119284Escherichia coli APEC O1, complete genome82.4081 %Subject ←→ Query31.9127
NC_015737:2050219Clostridium sp. SY8519, complete genome75.4718 %Subject ←→ Query32.545
NC_007519:3240864*Desulfovibrio alaskensis G20 chromosome, complete genome75.6097 %Subject ←→ Query32.733
NC_007384:1763375Shigella sonnei Ss046, complete genome80.9498 %Subject ←→ Query33.4012
NC_013592:2160000Dickeya dadantii Ech586, complete genome75.913 %Subject ←→ Query33.4874
NC_012912:2285778Dickeya zeae Ech1591, complete genome76.9424 %Subject ←→ Query33.4887
NC_014304:77715Erwinia billingiae Eb661 plasmid pEB102, complete sequence75.9252 %Subject ←→ Query34.3324
CU928160:256932Escherichia coli IAI1 chromosome, complete genome80.9988 %Subject ←→ Query34.5956
NC_013956:4579759Pantoea ananatis LMG 20103 chromosome, complete genome79.8744 %Subject ←→ Query34.8158
NC_012779:3316877Edwardsiella ictaluri 93-146, complete genome75.9957 %Subject ←→ Query34.9445
NC_014305:126029Erwinia billingiae Eb661 plasmid pEB170, complete sequence77.4939 %Subject ←→ Query35.5879
NC_009832:1946401Serratia proteamaculans 568, complete genome80.3922 %Subject ←→ Query35.908
NC_012779:2424967*Edwardsiella ictaluri 93-146, complete genome75.0061 %Subject ←→ Query35.992
NC_004631:685357*Salmonella enterica subsp. enterica serovar Typhi Ty2, complete78.0208 %Subject ←→ Query36.1113
NC_013961:3083816Erwinia amylovora, complete genome77.0006 %Subject ←→ Query36.2172
NC_007608:97092Shigella boydii Sb227 plasmid pSB4_227, complete sequence80.7782 %Subject ←→ Query36.3239
NC_009801:3374501*Escherichia coli E24377A, complete genome79.7396 %Subject ←→ Query36.3653
NC_006511:682863*Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC75.4657 %Subject ←→ Query36.3874
NC_004431:1352906Escherichia coli CFT073, complete genome87.9779 %Subject ←→ Query36.4239
NC_002695:2158314Escherichia coli O157:H7 str. Sakai, complete genome88.1464 %Subject ←→ Query36.4725
NC_011751:1377457Escherichia coli UMN026 chromosome, complete genome87.8738 %Subject ←→ Query36.813
NC_012779:2064582Edwardsiella ictaluri 93-146, complete genome75.2022 %Subject ←→ Query37.0151
NC_003198:2297837Salmonella enterica subsp. enterica serovar Typhi str. CT18,76.9822 %Subject ←→ Query37.159
NC_002695:2893951Escherichia coli O157:H7 str. Sakai, complete genome88.3149 %Subject ←→ Query37.275
NC_011080:2342672Salmonella enterica subsp. enterica serovar Newport str. SL254,76.8781 %Subject ←→ Query37.4165
NC_009648:3476000Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome81.5717 %Subject ←→ Query37.4593
NC_006905:2355290Salmonella enterica subsp. enterica serovar Choleraesuis str76.8658 %Subject ←→ Query37.6094
NC_011750:1931384Escherichia coli IAI39 chromosome, complete genome86.6299 %Subject ←→ Query37.6581
NC_014500:894136Dickeya dadantii 3937 chromosome, complete genome75.6495 %Subject ←→ Query37.8586
NC_011149:2294500Salmonella enterica subsp. enterica serovar Agona str. SL483,75.3585 %Subject ←→ Query38.0253
NC_007385:157516Shigella sonnei Ss046 plasmid pSS_046, complete sequence83.1342 %Subject ←→ Query38.0958
NC_013716:4824541*Citrobacter rodentium ICC168, complete genome77.2855 %Subject ←→ Query38.2235
NC_012779:957558Edwardsiella ictaluri 93-146, complete genome75.4933 %Subject ←→ Query38.2879
NC_002655:1909139Escherichia coli O157:H7 EDL933, complete genome89.3689 %Subject ←→ Query38.4667
NC_011750:919953Escherichia coli IAI39 chromosome, complete genome84.8897 %Subject ←→ Query38.6045
NC_011750:2009889Escherichia coli IAI39 chromosome, complete genome80.0153 %Subject ←→ Query39.0625
NC_012779:3176820*Edwardsiella ictaluri 93-146, complete genome76.3174 %Subject ←→ Query39.7546
NC_012779:305969Edwardsiella ictaluri 93-146, complete genome78.4865 %Subject ←→ Query39.836
NC_012779:2281700*Edwardsiella ictaluri 93-146, complete genome75.9038 %Subject ←→ Query40.1776
NC_014121:1822895Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete82.0803 %Subject ←→ Query40.59
NC_013592:1424560Dickeya dadantii Ech586, complete genome76.4308 %Subject ←→ Query41.2418
NC_014228:3282500Xenorhabdus nematophila ATCC 19061, complete genome77.8983 %Subject ←→ Query41.4806
NC_012779:2928000*Edwardsiella ictaluri 93-146, complete genome78.2292 %Subject ←→ Query41.5453
NC_010660:175200*Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence81.6207 %Subject ←→ Query46.3542
NC_009648:1487692Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome78.0239 %Subject Query49.6231
NC_009648:2465613*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome77.163 %Subject Query50.7802