Pre_GI: OUP Neighbours

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Query: NC_013714:2086526 Bifidobacterium dentium Bd1, complete genome

D: 34.1422

Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.

Number of Neighbours: 82




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_006351:101500Burkholderia pseudomallei K96243 chromosome 2, complete sequence75.2727 %Subject Query16.0567
NC_012724:2068588Burkholderia glumae BGR1 chromosome 1, complete genome75.2175 %Subject Query17.379
NC_007435:1914375Burkholderia pseudomallei 1710b chromosome II, complete sequence75.3278 %Subject Query21.5347
NC_007952:444616Burkholderia xenovorans LB400 chromosome 2, complete sequence75.1379 %Subject Query21.8183
NC_013722:1816561*Xanthomonas albilineans, complete genome75.4902 %Subject Query22.6104
NC_015382:172213Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequence76.1305 %Subject Query22.7041
NC_010557:1030319*Burkholderia ambifaria MC40-6 chromosome 3, complete sequence75.1256 %Subject Query22.7714
NC_010515:1618093*Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence77.9749 %Subject Query23.596
NC_015067:1528984*Bifidobacterium longum subsp. longum JCM 1217, complete genome82.9688 %Subject Query23.6908
NC_014118:1592000Burkholderia sp. CCGE1002 chromosome chromosome 2, complete75.6403 %Subject Query23.7539
NC_010625:1370462Burkholderia phymatum STM815 plasmid pBPHY01, complete sequence75.2206 %Subject Query23.9126
NC_007953:1088933Burkholderia xenovorans LB400 chromosome 3, complete sequence75.1042 %Subject ←→ Query24.5947
NC_009078:142794*Burkholderia pseudomallei 1106a chromosome II, complete sequence76.3817 %Subject ←→ Query24.6076
NC_015052:2383865*Bifidobacterium longum subsp. infantis 157F, complete genome80.8517 %Subject ←→ Query24.8906
NC_002928:123126Bordetella parapertussis 12822, complete genome75.7445 %Subject ←→ Query25.3213
NC_008543:2220698Burkholderia cenocepacia HI2424 chromosome 2, complete sequence76.6268 %Subject ←→ Query25.3497
NC_010676:304405Burkholderia phytofirmans PsJN chromosome 2, complete sequence76.3726 %Subject ←→ Query25.5023
NC_010515:1678487Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence76.0355 %Subject ←→ Query25.6489
NC_014118:987889Burkholderia sp. CCGE1002 chromosome chromosome 2, complete76.5288 %Subject ←→ Query26.341
NC_007406:2615916Nitrobacter winogradskyi Nb-255, complete genome75.8456 %Subject ←→ Query26.4561
NC_015684:2000771Oligotropha carboxidovorans OM5 chromosome, complete genome75.4902 %Subject ←→ Query26.6102
NC_008358:1789816*Hyphomonas neptunium ATCC 15444, complete genome75.242 %Subject ←→ Query26.7364
NC_002927:118982Bordetella bronchiseptica RB50, complete genome75.8946 %Subject ←→ Query26.8922
NC_010515:2111691Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence75.8241 %Subject ←→ Query26.9363
NC_008618:1487000Bifidobacterium adolescentis ATCC 15703, complete genome81.5319 %Subject ←→ Query26.9912
NC_006351:1886475Burkholderia pseudomallei K96243 chromosome 2, complete sequence76.8015 %Subject ←→ Query27.0178
NC_007435:566436Burkholderia pseudomallei 1710b chromosome II, complete sequence76.5104 %Subject ←→ Query27.0633
NC_006350:2427000Burkholderia pseudomallei K96243 chromosome 1, complete sequence76.6759 %Subject ←→ Query27.2678
NC_006350:3957454*Burkholderia pseudomallei K96243 chromosome 1, complete sequence75.7353 %Subject ←→ Query27.3391
NC_011386:2073726*Oligotropha carboxidovorans OM5, complete genome75.0092 %Subject ←→ Query27.3972
NC_007651:3064530*Burkholderia thailandensis E264 chromosome I, complete sequence76.3388 %Subject ←→ Query27.487
NC_009078:1841023Burkholderia pseudomallei 1106a chromosome II, complete sequence76.5074 %Subject ←→ Query27.5616
NC_008618:1704462Bifidobacterium adolescentis ATCC 15703, complete genome79.0839 %Subject ←→ Query27.5916
NC_007298:778723Dechloromonas aromatica RCB, complete genome75.5178 %Subject ←→ Query27.8158
NC_014722:2070864Burkholderia rhizoxinica HKI 454, complete genome75.5331 %Subject ←→ Query27.9659
NC_007298:219783*Dechloromonas aromatica RCB, complete genome76.7065 %Subject ←→ Query28.1317
NC_014355:2210884*Candidatus Nitrospira defluvii, complete genome76.3021 %Subject ←→ Query28.2753
NC_009074:3791232*Burkholderia pseudomallei 668 chromosome I, complete sequence75.723 %Subject ←→ Query28.3032
NC_009074:1555500Burkholderia pseudomallei 668 chromosome I, complete sequence75.913 %Subject ←→ Query28.5727
NC_009075:1906915Burkholderia pseudomallei 668 chromosome II, complete sequence76.8045 %Subject ←→ Query28.6053
NC_007973:2952004Ralstonia metallidurans CH34 chromosome 1, complete sequence75.1562 %Subject ←→ Query28.7625
NC_010552:58294*Burkholderia ambifaria MC40-6 chromosome 2, complete sequence75.432 %Subject ←→ Query28.7693
NC_009667:1341000*Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence75.337 %Subject ←→ Query29.4392
NC_007952:1453000Burkholderia xenovorans LB400 chromosome 2, complete sequence75.9743 %Subject ←→ Query29.5534
NC_014722:846084Burkholderia rhizoxinica HKI 454, complete genome75.3799 %Subject ←→ Query29.6093
NC_014355:781537Candidatus Nitrospira defluvii, complete genome77.6654 %Subject ←→ Query29.6445
NC_007953:314872Burkholderia xenovorans LB400 chromosome 3, complete sequence75.8088 %Subject ←→ Query29.9749
NC_010816:1274702*Bifidobacterium longum DJO10A, complete genome77.2518 %Subject ←→ Query30.0274
NC_010627:532407Burkholderia phymatum STM815 plasmid pBPHY02, complete sequence76.6912 %Subject ←→ Query30.1076
NC_010103:1777000*Brucella canis ATCC 23365 chromosome I, complete sequence75.2267 %Subject ←→ Query30.2076
NC_010623:188143Burkholderia phymatum STM815 chromosome 2, complete sequence78.223 %Subject ←→ Query30.626
NC_013722:1689125*Xanthomonas albilineans, complete genome77.0711 %Subject ←→ Query30.6852
NC_014722:2260489Burkholderia rhizoxinica HKI 454, complete genome76.25 %Subject ←→ Query30.7232
NC_003317:392271*Brucella melitensis 16M chromosome I, complete sequence75.0031 %Subject ←→ Query30.741
NC_013714:796442Bifidobacterium dentium Bd1, complete genome84.0288 %Subject ←→ Query30.9065
NC_010169:1599936*Brucella suis ATCC 23445 chromosome I, complete sequence76.7157 %Subject ←→ Query30.9754
NC_006932:956805*Brucella abortus biovar 1 str. 9-941 chromosome I, complete75.2175 %Subject ←→ Query31.0233
NC_009668:1591290*Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequence75.1501 %Subject ←→ Query31.0235
NC_009667:1934818Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence76.204 %Subject ←→ Query31.3936
NC_007435:2701242Burkholderia pseudomallei 1710b chromosome II, complete sequence76.1795 %Subject ←→ Query31.7684
NC_013959:1723037*Sideroxydans lithotrophicus ES-1 chromosome, complete genome76.4522 %Subject ←→ Query31.8554
NC_010742:955104*Brucella abortus S19 chromosome 1, complete sequence75.2175 %Subject ←→ Query32.1853
NC_007953:572926Burkholderia xenovorans LB400 chromosome 3, complete sequence75.5362 %Subject ←→ Query32.3001
NC_013959:83992Sideroxydans lithotrophicus ES-1 chromosome, complete genome75.8701 %Subject ←→ Query32.3271
NC_007952:1934249Burkholderia xenovorans LB400 chromosome 2, complete sequence76.2224 %Subject ←→ Query32.4964
NC_009078:862796Burkholderia pseudomallei 1106a chromosome II, complete sequence76.7892 %Subject ←→ Query33.0372
NC_006351:881655Burkholderia pseudomallei K96243 chromosome 2, complete sequence76.6483 %Subject ←→ Query33.053
NC_010676:3009980Burkholderia phytofirmans PsJN chromosome 2, complete sequence76.8536 %Subject ←→ Query33.0861
NC_008543:582129Burkholderia cenocepacia HI2424 chromosome 2, complete sequence75.4289 %Subject ←→ Query33.4091
NC_010805:1576735Burkholderia multivorans ATCC 17616 chromosome 2, complete76.1765 %Subject ←→ Query33.5191
NC_013959:156991*Sideroxydans lithotrophicus ES-1 chromosome, complete genome76.8229 %Subject ←→ Query33.6164
NC_010529:296500Cupriavidus taiwanensis plasmid pRALTA, complete sequence76.8658 %Subject ←→ Query33.7969
NC_007434:1923000Burkholderia pseudomallei 1710b chromosome I, complete sequence76.2132 %Subject ←→ Query33.8475
NC_015856:3912195*Collimonas fungivorans Ter331 chromosome, complete genome75.2604 %Subject ←→ Query33.8992
NC_015738:629297Eggerthella sp. YY7918, complete genome75.8578 %Subject ←→ Query34.4054
NC_015738:1114919*Eggerthella sp. YY7918, complete genome77.0833 %Subject ←→ Query34.8239
NC_013714:1521404*Bifidobacterium dentium Bd1, complete genome83.3762 %Subject ←→ Query35.5423
NC_015738:1971211Eggerthella sp. YY7918, complete genome75.8088 %Subject ←→ Query36.3101
NC_013165:1407000Slackia heliotrinireducens DSM 20476, complete genome79.1391 %Subject ←→ Query36.9972
NC_015856:268034Collimonas fungivorans Ter331 chromosome, complete genome75.3983 %Subject ←→ Query38.5264
NC_007510:759905*Burkholderia sp. 383 chromosome 1, complete sequence76.3603 %Subject ←→ Query38.531
NC_015067:459626Bifidobacterium longum subsp. longum JCM 1217, complete genome82.0159 %Subject Query45.9555