Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NS_000191: Uncultured Termite group 1 bacterium phylotype Rs-D17, complete

NCBI: NS_000191

Host Lineage: uncultured Termite group 1 bacterium; enviromental sample; ; ; Elusimicrobia; Bacteria

General Information: Termite gut symbion. Termites harbor a symbiotic gut microbial community that is responsible for their ability to thrive on recalcitrant plant matter. Found specifically within the cells of the cellulolytic flagellate Trichonympha agilis in the gut of the termite Reticulitermes speratus.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1120700*14754826849Island text2.0016428.220144.7995Neighbours37BLASTN120700.gbk
2344000*36288218883Island text1.5207724.381948.7351Neighbours21BLASTN344000.gbk
3782337*80392821592Island text1.9942121.593341.1477Neighbours21BLASTN782337.gbk
4870160*88909918940Island text1.585520.174735.6164Neighbours21BLASTN870160.gbk
592394994212118173Island text1.5386119.823133.5242Neighbours21923949.gbk
6977778*99646618689Island text1.9195519.880835.3088Neighbours21BLASTN977778.gbk
71037899*106009922201Island text1.4560619.8234.2673Neighbours21BLASTN1037899.gbk