Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_020418: Morganella morganii subsp. morganii KT, complete genome

NCBI: NC_020418

Host Lineage: Morganella morganii; Morganella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from blood during postoperative care of 57-year-old male cancer patient with a gallbladder stone who developed sepsis caused by bacteraemia at Changhua Christian Hospital, Taiwan.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1149653836323399Island text2.0534132.139530.695Neighbours41BLASTN+14965.gbk
2116500*16259846099Island text3.281342.84723.2265Neighbours41BLASTN+116500.gbk
344868747269224006Island text2.329437.816721.8064Neighbours41BLASTN448687.gbk
4603750*63209928350Island text5.8482242.517712.8897Neighbours41BLASTN+603750.gbk
51364943139115126209Island text1.7760629.118220.9227Neighbours411364943.gbk
61397112*142825931148Island text2.9843535.961321.4789Neighbours41BLASTN+1397112.gbk
71841138*185978818651Island text1.6622527.738918.0534Neighbours41BLASTN+1841138.gbk
82084937210937924443Island text1.999329.965125.517Neighbours41BLASTN+2084937.gbk
92718500273933420835Island text2.0777929.157823.8545Neighbours41BLASTN2718500.gbk
102868000*289702829029Island text2.8064933.738918.779Neighbours41BLASTN+2868000.gbk
112910593*293667626084Island text2.4125333.216825.1439Neighbours41BLASTN+2910593.gbk
123022891304822025330Island text1.890127.759520.3159Neighbours41BLASTN+3022891.gbk
133102460312748125022Island text1.9338232.134624.5668Neighbours41BLASTN3102460.gbk
143133831*315859924769Island text1.9202530.805840.6042Neighbours41BLASTN+3133831.gbk