Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_020388: Natronomonas moolapensis 8.8.11 complete genome

NCBI: NC_020388

Host Lineage: Natronomonas moolapensis; Natronomonas; Halobacteriaceae; Halobacteriales; Euryarchaeota; Archaea

General Information: This is an extremely halophilic archaon and the firstfrom the genus Natronomonas, which isnot alkaliphilic. This organism was first isolated from a crystallizerpond at the Cheetham marine solar saltern at Moolap,Victoria, Australia.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1252500*29337040871Island text4.7674948.673130.7452Neighbours12BLASTN+252500.gbk
248680351020323401Island text2.890531.091935.3332Neighbours11BLASTN+486803.gbk
3578500*63170353204Island text3.7838137.912727.845Neighbours12BLASTN+578500.gbk
4693479*72974836270Island text2.7705830.655428.8799Neighbours12BLASTN+693479.gbk
5884935*90829023356Island text2.9021932.468833.9145Neighbours11BLASTN+884935.gbk
61100759114507744319Island text4.0164540.566925.9625Neighbours12BLASTN+1100759.gbk
71428042146439636355Island text3.1036732.685423.0853Neighbours12BLASTN+1428042.gbk
81479568156493985372Island text2.8359732.042425.1976Neighbours12BLASTN+1479568.gbk
91582817161465031834Island text2.431729.34423.3961Neighbours12BLASTN+1582817.gbk
101618396163861820223Island text1.755827.979124.1991Neighbours12BLASTN+1618396.gbk
111869000189809929100Island text1.7944529.014125.955Neighbours12BLASTN+1869000.gbk
122662947268728624340Island text2.3529631.955824.3541Neighbours12BLASTN+2662947.gbk
132897482292249925018Island text2.9432830.92624.2153Neighbours11BLASTN+2897482.gbk