Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_020300: Bartonella australis Aust/NH1, complete genome

NCBI: NC_020300

Host Lineage: Bartonella australis; Bartonella; Bartonellaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Isolated from a grey kangaroo (Macropus giganteus).



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1131782*15008918308Island text1.616428.000451.1207Neighbours314BLASTN131782.gbk
258387460348619613Island text1.6287431.975554.5194Neighbours314BLASTN+583874.gbk
3646500*66871022211Island text1.5543529.381853.4048Neighbours25BLASTN646500.gbk
4675551*69856923019Island text1.8337128.593152.5582Neighbours314BLASTN+675551.gbk
5960692*97958218891Island text1.6102327.918350.5969BLASTN960692.gbk
61041523106613924617Island text1.6527228.983152.8759Neighbours314BLASTN1041523.gbk
71241968*126009918132Island text1.6244535.432955.3234Neighbours314BLASTN+1241968.gbk
81274581129336318783Island text1.4939932.551146.3698Neighbours25BLASTN+1274581.gbk
91344453*136609921647Island text1.8151939.257844.6941Neighbours314BLASTN+1344453.gbk