Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_020195: Blattabacterium sp. (Blatta orientalis) str. Tarazona, complete

NCBI: NC_020195

Host Lineage: Blattabacterium; Blattabacterium; Blattabacteriaceae; Flavobacteriales; Bacteroidetes; Bacteria

General Information: Obligatory endosymbiont of the cockroach Blatta orientalis.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1172229*19509922871Island text1.5155113.521822.7335Neighbours21BLASTN172229.gbk
2234392*25309918708Island text1.5424210.855417.491Neighbours21BLASTN234392.gbk
3285606*31052624921Island text2.1628316.336319.5667Neighbours21BLASTN285606.gbk
4330000*35336523366Island text1.4712511.618416.1895Neighbours21BLASTN+330000.gbk