Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_020181: Enterobacter aerogenes EA1509E, complete genome

NCBI: NC_020181

Host Lineage: Enterobacter aerogenes; Enterobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism is part of the normal human gastrointestinal flora which is able to cause opportunistic infections such as bacteremia, endocarditis and infections of the urinary and lower respiratory tract.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
136050040550545006Island text3.6694843.624527.8843Neighbours41BLASTN+360500.gbk
242194144800526065Island text2.1675737.367427.3477Neighbours41BLASTN+421941.gbk
3473170*50009926930Island text1.7948135.254436.0498Neighbours41BLASTN473170.gbk
4527592*57518147590Island text1.6807834.699927.2789Neighbours41BLASTN+527592.gbk
573447775586321387Island text1.7354132.43123.2367Neighbours51BLASTN734477.gbk
692900096303034031Island text2.7957942.726629.5278Neighbours41BLASTN+929000.gbk
796959999375524157Island text1.8682233.184728.4271Neighbours41BLASTN+969599.gbk
81057476107717519700Island text1.5016831.091925.4918Neighbours51BLASTN+1057476.gbk
91317647134038322737Island text1.5519430.502221.982Neighbours51BLASTN+1317647.gbk
101344259136282518567Island text1.525630.252923.1697Neighbours41BLASTN+1344259.gbk
111653261*168347330213Island text2.2743237.365318.2318Neighbours41BLASTN+1653261.gbk
122097066*212464227577Island text1.7291135.762123.9803Neighbours41BLASTN+2097066.gbk
132714559275614041582Island text3.3693845.793831.4912Neighbours41BLASTN+2714559.gbk
143328844335909930256Island text1.5862736.248848.0582Neighbours41BLASTN+3328844.gbk
153518396*354042322028Island text1.5206136.308450.7126Neighbours41BLASTN3518396.gbk
163585898*362589840001Island text1.8982335.015628.0956Neighbours41BLASTN+3585898.gbk
174800298*483905538758Island text1.9300434.437130.5126Neighbours41BLASTN+4800298.gbk
185130513517631045798Island text1.6768732.627633.2731Neighbours41BLASTN+5130513.gbk
195182568520953926972Island text1.4298837.712853.0454Neighbours41BLASTN+5182568.gbk
205217000524709930100Island text1.5926133.096242.1753Neighbours41BLASTN+5217000.gbk
215384015540784123827Island text1.5368237.285742.7914Neighbours41BLASTN+5384015.gbk